EMLSAT00000007891, EMLSAT00000007891-703738 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000007891
Unique Name	EMLSAT00000007891-703738
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s465	supercontig	LSalAtl2s465:364353..368919 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000007891 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000007891	EMLSAG00000007891-690657	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000034921	EMLSAE00000034921-743849	Lepeophtheirus salmonis	exon
EMLSAE00000034922	EMLSAE00000034922-743850	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776895	auto776895	Lepeophtheirus salmonis	polypeptide
EMLSAP00000007891	EMLSAP00000007891	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s465:364353..368919+

protein sequence of EMLSAP00000007891

>EMLSAP00000007891 ID=EMLSAP00000007891|Name=EMLSAP00000007891|organism=Lepeophtheirus salmonis|type=polypeptide|length=301bp
MVLEDMVFQSPFWLNGAELSCLLFADDIVLISSDNNGLQALVNSYIAAAA
XVGLTPNAAKCASLTIKGLRNQKRFVVDLESTIKFQVQKGFVNTPKKSAP
EEWNEIKVKRSSCGRISKAQQVFTPEAQEMMANLEKEILIQHGADSVRVM
NAEIQKRLPYKLLIGTIKKRRALPESKARVEQLCADITPNPNSTKFSYAW
TELEVETMVDAMRSYNGDQKXLAWNLAKLFYGRSVESIEAKLLTKEFGAV
EEVMQVDETEVSETDDVNLTAEERWIDHVIQSTPTWNRPMAHGCACGAAP
K

mRNA from alignment at LSalAtl2s465:364353..368919+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000007891-703738 ID=EMLSAT00000007891-703738|Name=EMLSAT00000007891|organism=Lepeophtheirus salmonis|type=mRNA|length=4567bp|location=Sequence derived from alignment at LSalAtl2s465:364353..368919+ (Lepeophtheirus salmonis)
ATGGTCTTGGAGGATATGGTTTTCCAGAGTCCATTTTGGTTGAATGGAGC
TGAGTTGTCGTGCTTGCTATTTGCTGATGACATTGTCCTGATATCCTCTG
ACAATAATGGTTTACAGGCATTGGTAAACTCCTACATTGCTGCTGCTGCT
SGTGTTGGTTTAACACCCAATGCAGCCAAATGCGCCAGCCTTACAATAAA
GGGGCTGCGGAACCAAAAACGTTTTGTGGTTGACCTTGAGTCCACGATTA
AGGTGGGGAATACTTGTATGCCCCAACTGAAATCAGGCGACTTGTATAAG
TACCTTGGGCTTAATTTCTCCTCTGACGGGTTGTTAAGATCGTCCCCTTC
TAAAAAGGCCGTGATGATGCTTAARCGTWTAAGGACTGCTCCTATAGCAT
CATTCCATAAATATATAATCCTGAGGGACCACCTGACCTCCAAACTCACT
TTTGAGATTGTGAGGGGAAAGGTGTCTCAAGGTGATTGCAAAGTGATAGA
TCTGGATGGAAAAAAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGAATGGACTGGTCTTTTCCATGATACACCTACCGA
TTTTTTCCATGCAAAAATTGCTGATGGGGGGCTCGGGATCTTTGAATTTG
TGCCAAGAGCGATCTTGGCAAAGAATTCGCGGATTCAGGCCTTGAACCGG
TCAAACGACCCTGTCATAAAAGCAATATTGTAGTTAAATCCAGCACAATA
TACCTGCAAACGTGTTATTGTGAGAGGATGTCAGCTGCATCAGCATTCTA
CCCTCGATAAGCTCTATGCTGAGAACCTTGCCTCCCATGTGGATACAAGG
GGATTGGCGTCTGCTGCCCAGGGAATGAAGAACTTTGGGTTCCTCTGGTC
CTACCGGAAAAAAGTCTCTGATTTTCAGTTCCAATCTGCAGTTCAGATCA
TGGCTGGGMCAGMAAAGAKTAAGAGMAAGGCAGCCAGGTTTACCCAATTT
AATGGCAGCAACTACTGCCCGTCCTGCCCAGGGATAATATGTAACTTGGG
ACATGTCCTGCAGGGGTGCATAAAGACAGGTAACCTACGCACAGGTCGGC
ATGACGCCATACAATCCATGGTGTCAAAGTCACTTGTAAAAAGGGGTTTC
GTTGTGGTTGAGGGGAGTGTTATCCCCTTTGAAAATACAACAATAAAGCC
CGATATGGTTGCCATTAAAAACAATGTTGGGTATATTATCGACCCTACAA
TCGTGAGTGACCAGGGAATCCTTACCAACTATGAACTGCTGAAATCTCAA
AAATATGGGTCCCCAGAAGRTATTAATGCTATAAGGRCCCATCTSGAGTT
GAGCACTGAGGTTCAKCTGTRTGTGCTACCGATAGTAGCCAACTGGAGGG
GGGTAATCTCCAAAAACTCATACGTTTCCATTGAGACATTAGGGATGCCC
TCTTCATATATCCAGTTCATACAGCTCAGGATCCTCTCGTGTGGGTACCA
TATATTTAGGTCATGGTCGCCTGACTATGAGGCTGCCCACAGGTGAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTAACCCCCCCCCCCCATATATGATGACT
CYCACATGACTTYATTKTAATGGATGTAGCATTACTGSGGKGTCAGGGGK
TTACTTAGCCTGTGTATGACTACAACCTTACCCACACACCCCAAAACCAT
ACTCCTACCCCATCCTTTTACCTCTATAAAACCCTAAGATTTGCACTCTT
CTTCTATTTATAGGCTGAGGGTGTATATCCTACTCTCATCTCGATAACCT
ATGTATGAGTGTATGTAAGAATCTGAACCCTACGGATGTGGACCAATGGT
TACGGTCAGAGCCATAAGTGCCAAGTACCACTTCCTCTTCCTCATGGATC
GCCTATGGCATGCTTTATATCAATGCCCTGGACAATTTCCTTTCCCTACC
CTCGGGTTTAATCATGGACTTCATGTGGCAAACCTATCTAAGTGTCTCCT
TCATTTTACTTTTCTCATGGGAGATACTTAACCACTTAATAGTGCTGCAT
CCTTCCTGAAGCGAATGCTGACATCTATTAAGCTTGTAGATATTATGTAT
AGATTTAGTGATGTCTACATTTAATTATTTATTAATGTGTGTATTATGTT
GCCGAGCAACTGCCTTGTTTAATGTATGTATATAATAATATGTCCTGTAT
GAGGTATAACCTTTGTATATTAATAACGTTATATCTCGGACTCTTACTTA
CCTAATGTGAACCATAGTCTCTATTGTATATGCATACACTAATGCATATC
TCAACACTCGGATATGGAAAACACATTATCATACCTTTACAACGTGTAAA
TATATTAATACCTCTTACTTCCTCTCTTACCAAACTCCAAGGCCACCTTT
GTATACCAGGTCTTTTAAATGTGGTCGCCTCTCGTTTGCCTAATTCTTTG
TTGTTGTATATATTTATATTACTTTCGATAATTTCGTGTTTGTGTTTTAC
CTTTATGTATTATGTATGGGGTAATGCTCGGCAAAGTTATTTTTCTTATG
TAATGTGTGTATTTCATGTCAATAAATGTTTGGGGGAATTGGGAGGGAGA
ACAGGTTCGAGAATGACAGCCCGTGGTGGGGCTATACAAAACATAGAGTG
CACTTTGTGGCACTGTAACAACAATGATTGCAAGGGCTTGAGACCCAGTG
CTCCCGAATACTGGGCAGGGTTATCCGTACAGGTGATAATTTTTTAACGA
AAATGTATTAATAATTTAAAGGACAGAACAGTTGTGATTCTCGTTCCTGT
TTTCGTTCCTATATCACTCATTAGTAGCCAAATGCCTCGTCATCTAATTA
GTGACGCGTATATTCATGTTTGGCTATCAATTAACAGTCAACTCAGAACT
GGCACGGATAAGGGGAATCCGACTGTCTAATTAAAACAAAGCATTGTGNN
NNNNNNNNNNNNNNNAAGGGGAATCCGACTGTCTAATTAAAACAAAGCAT
TGTGATAGTTGGAGAGCAATGATGACACAATGTGATTTCTGCCCAGTGCT
CTGAATGTAAAAGTGAAGAGATTCACCCAAGCGCGCGTAAACGGCGGGRG
KAACTATGACTCATCTTCAAGCACTAAATGTGAGCATAGAACATTGCCAT
AGCTTCGGGGCTATTACAAGTCTGTCTCCTGCCAGTGATATGAATACCTC
AAAGAATTTTATAGTGAAATTTAATTCGATCAAGCAGAGGTAATGGCGGG
RGRAGAGKATGAAATATGAAAAGGAAAAATATTAGCCAAGCCTTGGATGG
GGGTCGATCCCGCAAAAAGGGAGCCCAAAATTCCTCTTCTAGCGAAGAGT
CTGAGGACCACCTGCCTTTGGGTAAGGACTCTGAATATTCATACTTAAAC
AAAATACAAATACATTCAGTGACCGAATCTGACGAAGCATCAGACACGAG
TAGTCGCCCTAGGACTAGGGGAGAGACGCTTGTATGTGTCTTTTGTAAGG
AGGATGTTCGAAGTTTCAAGTCCAGAAGGGGTTTGTCAATACACCAAAAA
AGAGTGCACCCGAGGAATGGAACGAGATCAAGGTCAAGAGATCAAGCTGT
GGGAGAATATCGAAGGCGCAACAAGTGTTTACCCCAGAAGCTCAAGAAAT
GATGGCCAATTTAGAAAAAGAGATCCTGATCCAGCATGGAGCAGACTCTG
TTAGGGTGATGAACGCAGAAATACAGAAGCGTCTCCCGTATAAACTCCTT
ATTGGTACCATCAAGAAGAGAAGAGCTTTGCCTGAGAGCAAAGCGCGGGT
AGAACAGCTCTGTGCGGACATCACACCAAATCCTAACTCAACTAAATTTA
GTTATGCATGGACTGAGTTAGAGGTAGAAACCATGGTTGACGCTATGAGA
AGCTACAACGGTGACCAAAAAGMCCTAGCCTGGAATCTTGCGAAGCTATT
CTACGGCCGKTCTGTCGAGTCTATTGAGGCTAAACTTCTGACAAAGGAGT
TCGGAGCGGTCGAGGAAGTAATGCAAGTGGATGAGACTGAAGTAAGTGAA
ACGGATGACGTGAACTTAACTGCAGAAGAGAGGTGGATTGATCATGTGAT
CCAATCAACACCCACATGGAATAGGCCAATGGCTCATGGATGTGCTTGTG
GGGCAGCACCCAAATGA

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