EMLSAT00000007918, EMLSAT00000007918-703765 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007918
Unique NameEMLSAT00000007918-703765
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s467supercontigLSalAtl2s467:99564..102245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007918 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007918EMLSAG00000007918-690684Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035060EMLSAE00000035060-743988Lepeophtheirus salmonisexon
EMLSAE00000035061EMLSAE00000035061-743989Lepeophtheirus salmonisexon
EMLSAE00000035062EMLSAE00000035062-743990Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772098auto772098Lepeophtheirus salmonispolypeptide
EMLSAP00000007918EMLSAP00000007918Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007918

>EMLSAP00000007918 ID=EMLSAP00000007918|Name=EMLSAP00000007918|organism=Lepeophtheirus salmonis|type=polypeptide|length=746bp
MRLILQALMQAVLESPLRRRRSHQICPTEDSMPDLYACYSCPYFCKTAQE
LLRHVHGEEHASAMKQWNSRGKNYNNVQPNIFTNLFCDYCDEEFLHEASL
RLHRFGRKHLGGGRLNTKKLHPCYLCDTDKDININNHITEIEHCEKESMA
XGFLIFCYQNGFEIPLKISPESLIGFLETLPVASLIPNVKLLRRLFGSDD
NPNCPLNDKKLRIFISYTELSGSIYSPELPNKVIDLLTRCSFEEEKCSDT
RFDRTTKLFYHSVSVHMVSPTDLLKELLQKIENEELRCEKKNNCCKECHN
KSFISSLVYALHKDAHESRIECEHCMLQYKSVVEYCFKDDCGENNVVQST
KNLVDQMIKTVLLTSEIEHPLLIEKQSNKNFKDCHVKKRKRACSSDATDE
EGLVGHWLLNCPNVRARKISVASRKKVDDDDSDNSENSVRSSKIVLNGSP
QILPESEDEKDINGNLRKKPRLVHTSLPVEKPLRKRLSDKMLNPSLKSQR
SENGSKSVKSDTNVRSCRILPTKEAVDPHKKSALDKKLTPRTLQKYLNPR
TSPALTNSGLPLTRQNSKSKLNSSKILFKKDDKGLLSTQMNKIRSPNLNN
SKSETNELRYSQVKPXLPIPLKSRKCDVATKIKPVDTMAKKYEIKKVSYT
TDKFCRSQQIKNLNETITKTSNESADSDGPTISRSSTFVKNEIDDADPES
QSNLKRVKGSHESLLFASSPKRLSTKLKSASVERIDLHTKEKLLRN
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mRNA from alignment at LSalAtl2s467:99564..102245+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007918-703765 ID=EMLSAT00000007918-703765|Name=EMLSAT00000007918|organism=Lepeophtheirus salmonis|type=mRNA|length=2682bp|location=Sequence derived from alignment at LSalAtl2s467:99564..102245+ (Lepeophtheirus salmonis)
TAGCTTCACGTCATGAGGCTGATCTTACAAGCTTTGATGCAGTCAGGCAA ATGATTGAAATAATATTTATTTATTTACTTATTTGAGCTCATATATATTA AACAGTTGACCCGGATCTTAATTTTAGTTTAGTTATTTTTTTAATGTCAC TGCAGATACATACTTTGTATTAAATTGCATATATTAATATTATATCAATC ATTCATTAAATGGTTTAGAGCTGTATTAGAATCCCCCCTGAGGCGTAGAC GAAGTCATCAAATTTGTCCAACAGAAGATTCCATGCCTGACTTGTATGCA TGTTATTCATGCCCCTACTTTTGTAAGACAGCTCAAGAATTGCTTCGTCA TGTTCATGGGGAAGAGCATGCTTCTGCAATGAAGCAATGGAATTCACGTG GAAAAAATTATAACAATGTTCAACCAAATATATTCACCAACTTATTTTGT GATTATTGTGACGAAGAATTCTTACACGAGGCCTCTCTTAGGCTTCATAG ATTTGGACGAAAACATCTGGGTGGTGGTCGGTTAAATACTAAAAAGTTGC ATCCATGTTACTTATGTGATACTGACAAAGATATTAATATCAATAATCAT ATAACCGAAATTGAGCATTGTGAAAAGGAGTCTATGGCTGYTGGATTTTT GATATTTTGTTATCAAAATGGATTTGAAATACCACTCAAAATATCTCCTG AGGTAAGTCATATTTTTTTGGTATTGTAATGGTTCATATTAATCCCTTAT CCTATTTTTATAGTCTCTCATAGGTTTTCTTGAGACTTTACCAGTTGCAA GTCTTATTCCGAATGTAAAATTATTAAGAAGGCTGTTTGGGAGTGACGAT AATCCAAACTGTCCCCTTAATGATAAAAAACTTAGAATATTCATCTCTTA TACTGAGCTCTCTGGATCTATTTATAGCCCAGAATTACCAAATAAAGTCA TTGACTTGCTTACACGCTGCTCTTTTGAGGAAGAAAAATGTTCGGATACA CGTTTCGATAGAACAACAAAGCTTTTTTATCACTCTGTGTCGGTTCACAT GGTAAGTCCTACAGATCTTTTAAAGGAGCTACTTCAAAAAATTGAGAATG AAGAGTTACGATGTGAAAAGAAAAACAATTGTTGCAAGGAGTGTCACAAT AAATCCTTCATTTCTTCATTGGTCTATGCTCTTCATAAGGATGCTCATGA ATCTCGAATTGAATGCGAACATTGTATGTTACAATATAAATCTGTCGTTG AATATTGTTTCAAAGATGATTGTGGTGAAAACAACGTCGTACAGTCTACT AAAAATCTAGTTGATCAAATGATCAAAACCGTCCTTTTAACTTCTGAAAT TGAGCATCCTTTGTTAATAGAAAAGCAATCTAATAAAAATTTCAAAGATT GCCACGTCAAAAAACGTAAAAGAGCATGTTCATCAGATGCAACAGACGAA GAAGGACTTGTGGGGCATTGGCTTTTAAATTGTCCAAATGTACGTGCACG AAAAATATCCGTTGCATCTCGCAAAAAGGTTGATGATGATGATTCGGATA ACTCGGAGAATTCTGTACGTTCATCGAAGATTGTTCTTAATGGATCTCCA CAAATTCTTCCTGAGAGTGAAGATGAAAAAGATATAAATGGTAATCTTCG AAAAAAACCAAGACTTGTACACACTTCTCTTCCAGTTGAAAAACCTTTAA GAAAACGCCTATCTGATAAAATGTTAAATCCTTCACTAAAATCCCAAAGA TCAGAAAATGGTAGCAAGTCTGTAAAAAGCGATACAAATGTTCGAAGCTG TAGGATCCTTCCAACAAAAGAAGCCGTGGACCCGCATAAAAAATCTGCTT TAGATAAAAAACTCACTCCCCGAACTCTGCAAAAGTATTTAAATCCAAGG ACTTCACCTGCTTTGACAAACTCCGGACTTCCGTTGACTCGTCAAAATTC TAAATCTAAATTGAATTCATCCAAAATTTTATTCAAGAAAGATGACAAGG GTTTGTTATCTACTCAAATGAACAAAATACGATCTCCAAATTTAAATAAC TCGAAATCTGAGACCAATGAGTTGCGTTATTCTCAAGTGAAACCCAGKCT ACCAATTCCCCTTAAATCACGTAAGTGTGATGTTGCTACAAAAATTAAGC CGGTAGACACTATGGCAAAAAAATATGAAATAAAAAAGGTATCCTACACA ACGGACAAATTTTGCCGAAGTCAGCAAATAAAAAATTTGAATGAAACCAT CACAAAAACATCGAATGAATCTGCTGATTCAGATGGTCCAACGATATCAC GGTCATCCACGTTTGTTAAAAATGAAATTGATGATGCTGATCCTGAGAGT CAATCCAATTTAAAACGTGTTAAAGGATCGCATGAATCTCTTTTATTTGC ATCATCCCCCAAAAGGTTATCAACGAAATTAAAATCTGCGTCAGTTGAGC GTATAGACTTACACACCAAGGAAAAGCTATTAAGAAACTGATAGCATAAT AGTTTATATTAAATATATAATAGTCCTTTTAAATTTTTAAGATTATTCAT GTACTTCTAGACATCGTCAAGAATAATGACCATAGTTTCTTGTCGTTACG ATCTCATTAAATTGAATATAGCTTTTTTAATACATAATATCCACTACTTG ATAGAAATACTTATATTGTGAAATTTTGTTGA
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