EMLSAT00000007977, EMLSAT00000007977-703824 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007977
Unique NameEMLSAT00000007977-703824
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4723supercontigLSalAtl2s4723:2907..3565 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007977 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007977EMLSAG00000007977-690743Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035301EMLSAE00000035301-744229Lepeophtheirus salmonisexon
EMLSAE00000035302EMLSAE00000035302-744230Lepeophtheirus salmonisexon
EMLSAE00000035303EMLSAE00000035303-744231Lepeophtheirus salmonisexon
EMLSAE00000035304EMLSAE00000035304-744232Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768319auto768319Lepeophtheirus salmonispolypeptide
EMLSAP00000007977EMLSAP00000007977Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007977

>EMLSAP00000007977 ID=EMLSAP00000007977|Name=EMLSAP00000007977|organism=Lepeophtheirus salmonis|type=polypeptide|length=175bp
MTWKWNNFSKELKMNKRLDLLVNNAYSGVGIINECMGKPFYECPTPNMWD
KINGVGLRNHYLCTVYASRIMVENRAGLIVNISSGGGLKYLLNVPYGIGK
AACDXMAXDCAVELKNKNVTMVSIWPGLVKTEEITNRGLCSYTRKKSWAQ
NRDKRMFQSGESTEFTGMAIVKLAS
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mRNA from alignment at LSalAtl2s4723:2907..3565+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007977-703824 ID=EMLSAT00000007977-703824|Name=EMLSAT00000007977|organism=Lepeophtheirus salmonis|type=mRNA|length=659bp|location=Sequence derived from alignment at LSalAtl2s4723:2907..3565+ (Lepeophtheirus salmonis)
ATGACTTGGAAGTGGAACAATTTTTCGAAAGAGTTAAAAATGAACAAAAG
GGTTAGTTGGACTTGTTAGTAAACAACGCATATTCTGGAGTTGGGATCAT
TAATGAATGCATGGGAAAACCGTTTTATGAATGTCCAACTCCCAATATGT
GGGATAAGATTAATGGTGTTGGCTTAAGGAACCACTATCTTTGTACTGTA
TATGCTTCAAGGTAGGTCTATATTTTTAGAAAAATTATCTCATTCTCAAA
AAATTGGATCATACTGATTTATGACTGAGTGTATTTAAAGGATCATGGTA
GAAAATAGAGCTGGCCTAATTGTGAACATCAGCTCTGGTGGTGGACTCAA
GTATTTATTAAACGTACCCTACGGAATTGGTAAGGCAGCATGTGATKGAA
TGGCTYCTGATTGTGCTGTAGAACTTAAAAATAAGAATGTCACAATGGTC
TCTATTTGGCCAGGTCTGGTGAAAACTGAGGAAATAACAAATAGGGGTTT
GTGTTCGTATACACGCAAGTTAAATCAAATATACATTTAATTTACTAATT
ATATGTTTCACACTCTAGAAAATCATGGGCACAGAATAGAGACAAAAGAA
TGTTTCAATCAGGAGAATCAACAGAGTTCACGGGGATGGCGATCGTCAAA
TTAGCATCA
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