EMLSAT00000007983, EMLSAT00000007983-703830 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007983
Unique NameEMLSAT00000007983-703830
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s473supercontigLSalAtl2s473:248823..251300 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007983 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007983EMLSAG00000007983-690749Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035319EMLSAE00000035319-744247Lepeophtheirus salmonisexon
EMLSAE00000035320EMLSAE00000035320-744248Lepeophtheirus salmonisexon
EMLSAE00000035321EMLSAE00000035321-744249Lepeophtheirus salmonisexon
EMLSAE00000035322EMLSAE00000035322-744250Lepeophtheirus salmonisexon
EMLSAE00000035323EMLSAE00000035323-744251Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775267auto775267Lepeophtheirus salmonispolypeptide
EMLSAP00000007983EMLSAP00000007983Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007983

>EMLSAP00000007983 ID=EMLSAP00000007983|Name=EMLSAP00000007983|organism=Lepeophtheirus salmonis|type=polypeptide|length=514bp
MPFPKFLTSSRKRKERHSLKGNESVTPIEVEVEQPDCCWLRSLTFEDSLE
NPNLNGAFISFLESRDGSSHTFKFWMEVRTFKVVYSSNETMSIDSGYNST
EPNVQKNQLTDALRIYQKYVAPNGESLVPLPTEITHQIIKGICTETGLVD
PDCFTPVEHLLYSSLHNEDFSEFLRSSHYAKYLLEGGGPTTIRDILSNET
LLFRFTEFLESEGDKDSLSFWMIINNFHEQPEALQGDALVIYERYVSMQA
TNPLGFPNEIRSEIEEQICVQTGSLNLHLFDSALRIVVQNLNVKYLDPFL
HSSLFQNYISELKSTISSSVSPSKQFNKNFSARRSASVTSLASSCSDIST
QNTLLAMSRPQSRISKSKSDINGKILRNVDSYSMNMDTSWDPNYIWRSMS
SLNVSSRIVNIGEIDHLGRYISHFESPPSANPSAVAVAASIXQNNINNNN
NTTPAFVGDPIIRNNANSKFNRVMRVLGVSGNDIPEVQEQLAWHQAEIIV
KDIMNLTSNKNDSS
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mRNA from alignment at LSalAtl2s473:248823..251300+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007983-703830 ID=EMLSAT00000007983-703830|Name=EMLSAT00000007983|organism=Lepeophtheirus salmonis|type=mRNA|length=2478bp|location=Sequence derived from alignment at LSalAtl2s473:248823..251300+ (Lepeophtheirus salmonis)
TTATAATCAAAACTAAAAATGAACTTTCCGAAAAACTGTGACATTTAGTT
AGAAAATAATAGAAAAAATATTTGTCCTTGTAGGAGAACTATTAAATTAT
AAATGTCCGGGAGAGCCGGGATATGTCTTTAACTCCGGTCATGTGTAATA
ATAATGTTTCTTTAGGAACAATATATATTGTGAAATATAGAAGGATATGA
ATTGATATTATGAAAAAAAAGGAGCGCTTGTACTTTTTCCACCTTACACA
GGAATAATAGTAAAGAAGGAGGCAAGTTCTTAAATTTGAATGGGCCTAAG
GAGGTACTATGTGATTTGTGATTGGCTATTTGGTGTTTTACTCCTCTTTT
ACGTCAAATAATTTCTTTCTTTCTTTCAGAAGGACTATGAAAAATAAGGT
GACTCGTCCCGGAAACATGAGTCCGAGGCATTGAAAAATGCCCTTTCCCA
AATTTTTGACATCATCTCGAAAACGGAAGGAAAGGCATTCGCTAAAGGGG
AATGAATCCGTGACTCCGATTGAAGTGGAAGTGGAGCAACCTGACTGTTG
TTGGCTTCGATCCTTAACATTTGAGGACTCGTTAGAAAACCCTAATCTCA
ATGGGGCCTTCATTTCTTTTTTGGAGAGCCGAGACGGTTCCTCTCACACT
TTTAAATTTTGGATGGAAGTCCGTACTTTTAAAGTGGTGTACTCCTCGAA
TGAGACCATGAGCATTGACTCTGGATACAACTCAACTGAGCCCAATGTTC
AAAAGAATCAACTCACTGATGCACTTCGGATTTACCAAAAGTAATGTTTG
CTCCATCGATTGTTTGATGTTTGCAACTCATTTGATGAAGTGTTTCCTTT
GTTTCTCCAGGTACGTTGCACCCAATGGAGAATCTCTTGTTCCACTCCCT
ACTGAAATTACGCATCAAATTATTAAAGGTATATGCACAGAGACTGGATT
GGTTGATCCGGACTGTTTTACGCCTGTGGAACACTTACTATACTCATCCC
TTCACAATGAAGATTTCTCAGAGTTTCTTCGATCCTCTCATTACGCAAAA
TATCTCCTGGAGGGAGGAGGMCCCACCACAATTAGAGATATTTTATCCAA
TGAAACATTATTATTTCGATTTACCGAATTTCTAGAGTCAGAAGGGGATA
AGGACTCTTTGTCATTTTGGATGATCATCAATAACTTCCATGGTTAGTGG
CTCTACTAAGAATCAAGTCTTCAAATTTCTTTTTATCTTTATTTGTAAAT
AGATAACACTTTTTATCAAAGAAGTTAACATCTATTAAATGCCTTCAGAT
TGAAGCATATACCTACTTTATTTGTCTTTAAATAATTTATTTAGCAGCTT
CTTCATTTTATAATTGCAGAACAACCAGAAGCTCTTCAAGGAGATGCTCT
TGTTATATACGAAAGATACGTTTCTATGCAAGCAACGAATCCTCTAGGAT
TTCCAAATGAAATAAGATCCGAGATCGAAGAACAAATCTGTGTGCAAACC
GGATCACTCAATCTCCATTTATTTGATAGTGCTTTAAGAATTGTCGTACA
AAACTTAAACGTTAAGTACTTGGATCCCTTTTTGCATTCTTCGCTTTTTC
AAAATTATATTAGTGAATTAAAGTCAACAATTTCGTCCAGTGTATCGCCG
TCCAAACAATTTAATAAAAACTTCAGTGCTAGAAGGAGTGCCTCCGTGAC
GTCCCTTGCGAGCTCTTGTTCGGACATTAGTACTCAAAATACGTTATTAG
CAATGTCCAGACCTCAATCAAGGATTTCCAAATCCAAGTCGGATATTAAT
GGTATTTAAAAAGATGATTTTTAAACTATATATATTTAGAATGTAACATA
TGATTTTAGGGAAAATACTGCGTAATGTAGACTCTTATTCGATGAATATG
GACACTTCTTGGGACCCTAATTACATTTGGAGGTCTATGAGCTCTTTAAA
TGTATCTTCCCGAATTGTAAATATTGGAGAAATCGATCATTTGGGTCGCT
ATATCTCCCATTTTGAATCYCCACCATCTGCTAACCCAAGTGCCGTGGCC
GTAGCGGCTTCTATTYAACAAAACAATATTAACAACAATAATAATACCAC
ACCAGCGTTTGTTGGTGATCCCATCATCCGTAACAATGCTAACTCAAAGT
TCAATCGTGTCATGAGAGTACTTGGAGTTTCTGGTAATGACATTCCTGAA
GTTCAGGAACAACTAGCATGGCATCAAGCTGAAATAATTGTCAAAGATAT
AATGAATCTCACGTCCAACAAAAATGATTCGTCTTGATATAAATTTTTTT
TGTACTTGTGATACATTTTTTTAATACAAATCACTCCAGCCAGTTTTTTA
GAGATTATTTTTAGGTGATACTAAGTTATTATATGTGATCTGATTACGTG
GATTGTTGTATCACATAGGTTATTTGTTTTTTTATATTTTTTTGCTAGAA
GTTGAAAAAGAAAAAAAATATATTTTAG
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