EMLSAT00000008003, EMLSAT00000008003-703850 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008003
Unique NameEMLSAT00000008003-703850
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s475supercontigLSalAtl2s475:262797..263603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008003 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008003EMLSAG00000008003-690769Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035399EMLSAE00000035399-744327Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775513auto775513Lepeophtheirus salmonispolypeptide
EMLSAP00000008003EMLSAP00000008003Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008003

>EMLSAP00000008003 ID=EMLSAP00000008003|Name=EMLSAP00000008003|organism=Lepeophtheirus salmonis|type=polypeptide|length=268bp
MPDKVIPSHHPPKTATDSSSASSNSSHPKIKIKEIKHEKNIPSSSSSLSS
SVAAAPPSSSSLRLSPIPPSIKESISSVGVNSSSKSSSKSSLSTVKPPKL
ILKPPKDNYDISSSSSATTTTTASKKPKLDKKDFMTTSSSSLSGVAAGVG
XLPSSKAEKKAKKSTKIPKEESNLTPIPDATTSSSIGMITTQTVGHYVDA
EGNQIWICPACGKQDDGSPMIGCDKCDDWYHWACVGISAEPAENQDWFCT
RCMAKKTNFLDKKGKKKY
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mRNA from alignment at LSalAtl2s475:262797..263603+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008003-703850 ID=EMLSAT00000008003-703850|Name=EMLSAT00000008003|organism=Lepeophtheirus salmonis|type=mRNA|length=807bp|location=Sequence derived from alignment at LSalAtl2s475:262797..263603+ (Lepeophtheirus salmonis)
ATGCCCGATAAAGTCATACCCTCACATCACCCTCCCAAAACAGCAACAGA
CTCATCTTCCGCTTCCTCAAACTCATCACACCCAAAAATCAAAATTAAGG
AGATTAAACATGAAAAAAACATTCCATCATCATCTTCTTCACTATCATCA
TCTGTTGCTGCTGCACCCCCATCTTCCTCTTCTCTTCGCCTTTCTCCCAT
TCCTCCGTCGATAAAAGAAAGCATTAGCAGTGTGGGTGTTAATAGTAGTA
GTAAATCATCTTCAAAGTCGTCCTTATCTACTGTTAAGCCTCCTAAATTG
ATATTAAAACCGCCTAAAGACAACTATGACATATCCTCGTCAAGTTCAGC
GACGACGACGACGACAGCTTCGAAAAAACCTAAATTAGATAAAAAAGACT
TTATGACCACATCCTCCTCTTCTTTAAGTGGTGTTGCGGCTGGKGTTGGG
AGNCTCCCCTCCTCCAAAGCTGAGAAAAAGGCCAAGAAAAGTACAAAGAT
ACCCAAAGAGGAAAGCAACTTAACACCCATTCCTGATGCAACAACAAGTA
GTAGCATTGGTATGATAACTACGCAGACGGTTGGACACTATGTGGATGCT
GAAGGKAATCAGATTTGGATTTGCCCTGCTTGTGGAAAACAGGATGATGG
CTCTCCGATGATTGGATGTGATAAATGTGATGATTGGTATCATTGGGCCT
GCGTTGGCATTTCAGCTGAGCCTGCTGAAAATCAGGATTGGTTCTGTACG
CGCTGTATGGCCAAAAAGACTAACTTTTTAGATAAAAAGGGGAAAAAGAA
ATACTGA
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