EMLSAT00000008034, EMLSAT00000008034-703881 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008034
Unique NameEMLSAT00000008034-703881
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s478supercontigLSalAtl2s478:578823..580437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008034 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008034EMLSAG00000008034-690800Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035522EMLSAE00000035522-744450Lepeophtheirus salmonisexon
EMLSAE00000035523EMLSAE00000035523-744451Lepeophtheirus salmonisexon
EMLSAE00000035524EMLSAE00000035524-744452Lepeophtheirus salmonisexon
EMLSAE00000035525EMLSAE00000035525-744453Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778703auto778703Lepeophtheirus salmonispolypeptide
EMLSAP00000008034EMLSAP00000008034Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008034

>EMLSAP00000008034 ID=EMLSAP00000008034|Name=EMLSAP00000008034|organism=Lepeophtheirus salmonis|type=polypeptide|length=334bp
MNIKIFIGFGILILLFNNVNFFKRNGMLMQRKVYVPIEKCNCSRAYYDSY
FKWLSDDTLYAETTCSETAWRRGSKQKVMSYTYYANSLTNDEATHAYIKG
IAANVQSIKKFFPGWAMRLYYDVHSTHPLYKDMCRLVCQNNHVDLCNVRN
LPGVPLKNASSLFGMLWRFFPTLDPQVDIIGSRDLDSVFTEREVAAVQEW
MNSDKILHAMRDHPQHKTEILGGLWEANVVSQKARNLWKKSWDDLIVDTS
AWTGKSGRGNDQRLLTRYIWNIWGHKNALHHDSYFCQVYSNSTPWPVQRK
KGVNNFVGAVVKSNLTIWQECPQKCRKHSEWKLC
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mRNA from alignment at LSalAtl2s478:578823..580437+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008034-703881 ID=EMLSAT00000008034-703881|Name=EMLSAT00000008034|organism=Lepeophtheirus salmonis|type=mRNA|length=1615bp|location=Sequence derived from alignment at LSalAtl2s478:578823..580437+ (Lepeophtheirus salmonis)
GTGCTATTAATTTTTACCCTAGTTTCATTCAACAATTAGAAAATCCCATC TAATCAGTGTTGTAGGGTTCTTTGAAAAGAGCTCAATGAATATAAAAATA TTTATTGGTTTTGGGATTTTAATCCTCCTATTCAACAATGTCAATTTTTT CAAAAGGAATGGGATGTTAATGCAAAGAAAAGTTTATGTCCCTATCGAAA AATGTAATTGCAGTCGAGCGTATTACGATAGTTATTTTAAATGGTTGAGT GATGATACTTTATATGCTGAAACGACTTGCTCAGAAACAGCGTGGCGAAG AGGCTCGAAACAAAAAGTTATGTCCTATACATATTATGCCAATTCATTGA CGAATGACGAAGCAACTCATGCTTATATTAAAGGAATTGCAGGTAAAATA CATAATATAAGTATGGTGTCAGGGGAATTGGTGGGTCAATAACTTTGGTG GCCAGAGGGGAAAATGCCTCCATTTCCCATCTATTTTGAAAACCTTAGCT CTTAAAAACGGAAATCTTTGACTTTATTATAATTGTAGCTAACGTGCAGT CAATTAAAAAATTCTTCCCGGGATGGGCAATGCGACTCTACTATGACGTT CACTCAACACATCCCCTCTATAAAGACATGTGTCGTCTCGTATGCCAAAA TAACCATGTGGATTTATGCAACGTGAGAAATCTTCCAGGAGTTCCTTTAA AAAATGCTTCTAGTCTGTTTGGAATGTTATGGAGATTTTTTCCTACGCTA GATCCGCAAGTGGATATCATAGGGAGCAGAGATCTCGATAGTGTTTTTAC AGAGAGAGAAGTTGCTGCAGTCCAAGAATGGATGAACTCTGATAAAATCC TTCATGCGATGAGGGATCATCCACAGCATAAGACAGAAATACTCGGTACG TTCTAAATTTAAAAACATAAGGGTTTGGACATTATGTTCTTTCAGGAGGG CTTTGGGAAGCGAATGTAGTTTCACAAAAAGCACGTAATCTATGGAAGAA ATCATGGGATGATTTAATAGTTGACACAAGTGCTTGGACTGGCAAATCAG GCCGAGGAAATGATCAGCGTTTACTTACAAGGTTTTTATATTTCTAAAAT GTAGAAAATAAATCTACGAGTGTAAATCCTAAATAATAATAATAATTTAT TCTAGATATATTTGGAATATCTGGGGACATAAAAATGCTCTTCATCATGA CTCATATTTTTGTCAAGTTTATTCTAATTCTACTCCATGGCCTGTACAGA GAAAAAAGGGCGTGAATAACTTTGTTGGAGCTGTTGTAAAATCCAATCTC ACAATTTGGCAAGAATGCCCGCAAAAATGTCGGAAGCATTCCGAATGGAA GTTATGTTAAATAAGTTAATAGAATCAAAATATTCGATGTTAAAGAACCT TTAAAAAATTTTATTTTATATACATATGTACTGACCTTTTCTTTCGTAAT ATGGCTCSRAATTAATTCTATTTMTCATTAATATAGATCATAAATCATTT GAGAGGTGATATTGATAAAATTGAATACATACAGGTGACATTTTCTTAGT GCATTTGTATACAGTACATTGTTTGAAAGATTAATAAAAGTAAGTCTGTT TCGTTTCGAATATAG
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