EMLSAT00000008038, EMLSAT00000008038-703885 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008038
Unique NameEMLSAT00000008038-703885
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s478supercontigLSalAtl2s478:620550..622126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008038 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008038EMLSAG00000008038-690804Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035534EMLSAE00000035534-744462Lepeophtheirus salmonisexon
EMLSAE00000035535EMLSAE00000035535-744463Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778942auto778942Lepeophtheirus salmonispolypeptide
EMLSAP00000008038EMLSAP00000008038Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008038

>EMLSAP00000008038 ID=EMLSAP00000008038|Name=EMLSAP00000008038|organism=Lepeophtheirus salmonis|type=polypeptide|length=357bp
MTDGASEADIEVIEEVEALEATLLEGIRIRRGIEGSERPTDLELVMTPLT
ASDEERAFVSLTLKLSIPLGYPRERPSIVIAHPRGLGESGISSLEKGLAK
KCRDNLGDPILYQLVEYTQEFLTESNVPACSCAVCLCDLKKEDSFIKTPC
YHYFHSLCYGSYIQNEISNRKAEEEEKQEQTTRDLRCPVCREILVQDVLN
YDFSHFLKSPPPVVQVPESFTLTEDLKELQNSMKNLFEKQKLNGAIIDIE
AENSMTVLSIGENTERNELPLPSPSTHSLPQVSNGNNNNINKVKFKSKRT
PNVVPSTSSSSDVSRSENPRRLARYKKYHSHNISRHQMHKNMKASKSGND
TPEPGNL
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mRNA from alignment at LSalAtl2s478:620550..622126+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008038-703885 ID=EMLSAT00000008038-703885|Name=EMLSAT00000008038|organism=Lepeophtheirus salmonis|type=mRNA|length=1577bp|location=Sequence derived from alignment at LSalAtl2s478:620550..622126+ (Lepeophtheirus salmonis)
TAAATAACCTTGTCCGAAACGTTGACTTCTATTAAACTACACTATATGAA
TCTTAGTCAAAACACGTGACAAGAATGAACTGTGCGAAAGAAGTTCAAAG
CGCATATACGCAATTTTAAACGAATTAGAACTAGAAATAAGAAAATGAGC
TCTTTCCCTTCTAGTCTAGATCTTTACTCTGATGTCTTAGCTATTTATGC
TGTCAGCTACAGATTTGGGATCAATGAAATTGAAATTATTATCATTTGCA
GTTGTACGTTTTGATTGAAAGCTGTGAAATAAAAGTTTTAGAAATGACAG
ACGGAGCCTCCGAAGCGGACATCGAAGTTATAGAAGAGGTTGAAGCTTTA
GAGGCTACCCTCTTGGAGGGAATTCGAATCCGAAGGGGKATTGAAGGTTC
TGAGCGGCCAACGGATTTGGAGCTGGTCATGACTCCTCTCACTGCCAGTG
ATGAAGAGAGAGCTTTTGTGTCCCTCACTTTGAAACTCAGCATTCCCTTA
GGTAAAGCCTCATTCTTCTGGAATTCATATATAAAATAATGTACTTGATT
TTGCTTGAATTTGGTTCAGGTTACCCAAGGGAGCGCCCCAGTATAGTCAT
AGCCCATCCTCGTGGTCTGGGCGAATCTGGAATCTCTTCTCTTGAAAAAG
GCTTGGCTAAAAAATGTAGGGACAATCTGGGGGATCCCATTTTGTATCAA
CTAGTGGAATATACGCAAGAATTCCTCACCGAGTCCAATGTCCCTGCATG
TTCCTGCGCCGTCTGTCTTTGTGACTTAAAAAAAGAGGACTCCTTTATCA
AAACCCCCTGCTATCACTATTTCCATTCCCTTTGCTATGGTTCCTACATT
CAAAATGAAATATCCAATAGAAAAGCTGAGGAGGAGGAAAAGCAGGAACA
AACGACACGGGATCTACGTTGTCCAGTTTGTCGTGAAATCCTTGTTCAAG
ATGTGTTAAACTACGATTTCTCTCATTTCCTTAAAAGTCCTCCCCCCGTG
GTTCAGGTACCCGAGTCATTTACTTTAACAGAAGATCTTAAGGAACTACA
AAATTCTATGAAAAATTTGTTTGAAAAACAAAAGTTGAATGGAGCCATTA
TTGATATTGAAGCGGAAAATAGTATGACTGTGCTATCCATTGGGGAAAAC
ACGGAGCGTAATGAACTACCTCTACCCTCGCCGTCTACTCATTCCTTGCC
TCAAGTATCGAATGGAAATAACAATAACATCAATAAAGTCAAATTCAAAT
CAAAAAGGACTCCTAATGTTGTTCCTAGTACTTCCTCTTCTTCGGATGTA
TCTCGAAGTGAGAACCCCCGACGACTTGCTAGGTATAAAAAGTATCATAG
TCATAATATAAGTAGACATCAAATGCATAAAAACATGAAGGCTTCCAAGT
CTGGGAATGATACTCCTGAACCTGGTAATTTATGACAGGAGATGAATCAT
ACTCTATTGGTTTTTATTTTCAGTTCTAGTTTATTATTTTAAACAAATAT
ATACTTATCTGAGTTTCCTTCTGTTCTTATTAATTGAATTAATTATTTAT
AAATGTGATTTCTTTCTCCCCCCCCCC
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