EMLSAT00000008053, EMLSAT00000008053-703900 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008053
Unique NameEMLSAT00000008053-703900
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s479supercontigLSalAtl2s479:237539..238248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008053 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008053EMLSAG00000008053-690819Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035590EMLSAE00000035590-744518Lepeophtheirus salmonisexon
EMLSAE00000035591EMLSAE00000035591-744519Lepeophtheirus salmonisexon
EMLSAE00000035592EMLSAE00000035592-744520Lepeophtheirus salmonisexon
EMLSAE00000035593EMLSAE00000035593-744521Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775055auto775055Lepeophtheirus salmonispolypeptide
EMLSAP00000008053EMLSAP00000008053Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008053

>EMLSAP00000008053 ID=EMLSAP00000008053|Name=EMLSAP00000008053|organism=Lepeophtheirus salmonis|type=polypeptide|length=173bp
MNMIKQLEDMGHNVDFKGILKHDPVQEIEGKGMALNRENVHAYNLKLKTE
VSNILKDNRFCLVIGGFTSVHSHGCLLWVDAHSDINTPDTSDSGNMHGMP
VAYQISEIYNSFKDKFSICDWHEPRLSSDRIAFIGLRSVDPEEAKILKDL
NIKAYYMNDVDELSINEVRIVYF
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mRNA from alignment at LSalAtl2s479:237539..238248+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008053-703900 ID=EMLSAT00000008053-703900|Name=EMLSAT00000008053|organism=Lepeophtheirus salmonis|type=mRNA|length=710bp|location=Sequence derived from alignment at LSalAtl2s479:237539..238248+ (Lepeophtheirus salmonis)
ATGAATATGATTAAACAATTAGAGGATATGGGTGAGTTACACAATAATTG
CCTATCATAATCGTTTATTATTATATTAAATAGATAAAAATTTACTCCTA
GATCATACATTTCCTTATAGGACACAATGTAGACTTTAAAGGGATCCTAA
AGCATGATCCTGTACAAGAAATTGAGGGAAAGGGAATGGCTCTCAATCGA
GAAAATGTCCATGCTTATAACCTAAAGGTATTAATAATGTACTATTATTA
CCGCTTACTATTAAACATTTCTCAAAATTGATTGTCATTACAGTTAAAAA
CCGAAGTGTCCAATATTCTTAAGGACAATCGCTTTTGTCTAGTGATTGGA
GGTGATCATTCCATTGGGTTATGAACCGTTTCAGGATTTACAAGTGTTCA
TTCACATGGATGTCTCCTATGGGTTGATGCTCACTCCGATATTAATACAC
CAGATACATCTGATTCTGGTAACATGCATGGAATGCCGGTGGCGTATCAG
ATTAGTGAGATTTACAACAGTTTCAAGGATAAATTTTCGATCTGTGACTG
GCATGAGCCGAGATTAAGTTCAGATAGAATAGCTTTCATAGGATTAAGGT
CCGTTGATCCAGAGGAAGCAAAAATATTAAAAGATTTAAATATAAAAGCT
TACTACATGAATGACGTCGACGAACTAAGTATCAATGAGGTGAGAATAGT
ATATTTTTAA
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