EMLSAT00000008099, EMLSAT00000008099-703946 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008099
Unique NameEMLSAT00000008099-703946
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s481supercontigLSalAtl2s481:72730..74131 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008099 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008099EMLSAG00000008099-690865Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035753EMLSAE00000035753-744681Lepeophtheirus salmonisexon
EMLSAE00000035754EMLSAE00000035754-744682Lepeophtheirus salmonisexon
EMLSAE00000035755EMLSAE00000035755-744683Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771377auto771377Lepeophtheirus salmonispolypeptide
EMLSAP00000008099EMLSAP00000008099Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008099

>EMLSAP00000008099 ID=EMLSAP00000008099|Name=EMLSAP00000008099|organism=Lepeophtheirus salmonis|type=polypeptide|length=147bp
MSDTKEPLQCVQTFGKKKTATAVAYCKRGKGLVKVNGRPLEQVEPKALQY
KLQEPILLLGKDRFSDVDIRVRVKGGGHVSQIYAIRQAIAKSLVAYYQKY
VDEQSKKVIKDTLVQFDRTLLVADPRRCEAKKFGGPGARARYQKSYR
back to top

mRNA from alignment at LSalAtl2s481:72730..74131+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008099-703946 ID=EMLSAT00000008099-703946|Name=EMLSAT00000008099|organism=Lepeophtheirus salmonis|type=mRNA|length=1402bp|location=Sequence derived from alignment at LSalAtl2s481:72730..74131+ (Lepeophtheirus salmonis)
TAATAATAGATACTGTATATGCAATACAATAGAACCACGAATAGAACCAA
TGACAAAGGTTGCGTTACATATAAAGGAAGACGCCGTCTAAATAAAATTC
CTTACATGTTTAGGTAGTTGTTGATAGGTTTTGTTGAACCCTTCAACTTA
CTTCCTTTTCCTCCTTTTCATCGAGAAGTAAACAAGGTAAGATCGAAAAT
CCTCTCTTATTCCCCCAAATCCGACATAATCCGTGATATCCTTTCAGATG
AGTGATACCAAGGAACCTCTACAGTGCGTTCAAACCTTCGGTAAGAAGAA
GACCGCTACCGCAGTTGCCTACTGCAAGAGAGGAAAGGGTCTCGTCAAGG
TTAATGGACGTCCTTTGGAGCAAGTTGAGCCCAAGGCTCTTCAATACAAA
TTACAGGAGCCCATCCTTCTTCTTGGTAAGGATAGATTCTCCGATGTAGA
CATCCGTGTTCGCGTCAAGGGTGGTGGACATGTTTCACAAATCTATGCCA
TTCGTCAGGCTATTGCCAAGTCCCTTGTGGCTTACTATCAAAAATGTAAG
TAGTTTGTAATTTTGCAGCTCTTGTTTGAATGGAGATTCGACTCTTGTTC
TTCTATTCGTAAGAAAAATTCACTCATTCTAATGAGGACGTCAATAATTA
AATATACACTTTTTCTTGCAGACGTTGACGAACAATCCAAAAAGGTTATC
AAGGATACTTTGGTACAGTTCGATCGTACTCTTCTCGTTGCTGATCCTAG
ACGTTGCGAGGCCAAGAAATTCGGAGGTCCCGGTGCTCGCGCAAGATACC
AAAAGTCTTACCGTTAAGATCGGCGGCCACCCATTTTGTTTCATATTTAC
ATGCTCTTATTGAAATACTATTGAGTTATAGTTGAACTGTGTATTCAATC
ATTAATTAAGTGTGTAATTATACACTTTCTTTAGAAGTGATGTCGAGTTA
ATGTTATTATTAGTTGTGGAAAAGTATGCCGCATAACACGGCAGGGTTAA
ACAATTCGGATTTCACATAGTGCTTTGAATTATTCCAACTCTTCTCATAA
AGTGGTTTATTCCATCTATATAAGCATTATAACATCTTTTTATTATGATA
CGTAGGATTACTATTTTTGTGGATAACGTTCCATAGATTGTGGCATGATG
GTTTAATATTAATAGGATAGAAGAGCTAAACTATTCACTGAGAGTTGAGA
GGGGTCGCCCCCATTTCATTTCAAGTTTTTGATATTATTTTTGGATATAA
AACTATGTTTAATAACAAAATGGCCCTGCATTAATGAGTGTTAGATGTTC
TGAGTACTTTATTTTATTTTATCAGATTTATGTCTTAATGTGCAACTATT
CATTTTATTTTAAGGGCTGTAATACTAAAAAGCTAAATACTAAATATATT
AG
back to top
Add to Basket