EMLSAT00000008107, EMLSAT00000008107-703954 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008107
Unique NameEMLSAT00000008107-703954
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s482supercontigLSalAtl2s482:180917..181915 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008107 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008107EMLSAG00000008107-690873Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035782EMLSAE00000035782-744710Lepeophtheirus salmonisexon
EMLSAE00000035783EMLSAE00000035783-744711Lepeophtheirus salmonisexon
EMLSAE00000035784EMLSAE00000035784-744712Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774001auto774001Lepeophtheirus salmonispolypeptide
EMLSAP00000008107EMLSAP00000008107Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008107

>EMLSAP00000008107 ID=EMLSAP00000008107|Name=EMLSAP00000008107|organism=Lepeophtheirus salmonis|type=polypeptide|length=281bp
MTPFLSFVPPRRLLSTLLTHVSHDTRIQTLTLNDVKTRNSLSLSLLQSLK
AAFQGEENGSHHESLRAIIIRXADPRVFSGGHDLKELSSGNEKLVQDIFD
TCGELTRAIRECPVPVIAXIDGVAAAAGXQLVAAXXIAVATKKSSFSTPG
ASVGIFCSSPGVPLIRNANLKTSAYMLLTGKPINATQALQSGLISRLTED
TKALERELDEICKAIIDKPKGVIAMGKKFMYEQLEMRSYHEALVRAGDVM
VQNLKYKDTKEGMEAFLKKKKPNWTHTHDKD
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mRNA from alignment at LSalAtl2s482:180917..181915-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008107-703954 ID=EMLSAT00000008107-703954|Name=EMLSAT00000008107|organism=Lepeophtheirus salmonis|type=mRNA|length=999bp|location=Sequence derived from alignment at LSalAtl2s482:180917..181915- (Lepeophtheirus salmonis)
ATGACTCCATTTCTTTCCTTTGTGCCTCCTCGGAGACTCCTCTCCACACT
TCTCACCCATGTCTCACACGACACAAGGATCCAAACACTGACTCTCAATG
ATGTCAAGACGCGAAACTCTCTCTCCCTGAGTCTCCTTCAAAGTTTGAAG
GCTGCATTCCAAGGAGAAGAAAATGGAAGCCATCACGAGTCACTCAGAGC
TATCATCATCCGARCCGCCGATCCACGAGTTTTCTCTGGRGGTCATGACC
TCAAGGAACTCAGCTCCGGAAATGAAAAACTCGTGCAGGTATGAAAGAGA
ACCGAATCAATTATCAAATCCTTAATTATGGAAATATGTATAAAGTATCT
CAACTCAAAGTCAATCCTCGTTTATTTCAGGACATTTTTGATACGTGTGG
AGAGCTGACTCGAGCCATTCGAGAATGCCCTGTCCCAGTGATTGCGSCCA
TAGATGGGGTAGCCGCTGCAGCGGGSTGMCAGCTTGTYGCTGCCMGTGYC
ATTGCAGTAGCCACAAAGAAGTCAAGTTTCTCTACACCAGGGGCCTCAGT
AGGTAAGGTTTGAAATCCTCTTCCTTGGGTCAGTTCTATTAAAATCATAC
TGATTCTAAAAAGGAATCTTCTGCTCCTCACCTGGAGTGCCCCTCATAAG
AAATGCCAATCTCAAGACGTCAGCATACATGCTTCTCACTGGAAAGCCAA
TTAATGCTACTCAGGCTCTTCAATCTGGACTTATTTCTAGACTCACTGAG
GATACAAAAGCTTTAGAAAGGGAATTGGATGAAATATGCAAGGCCATTAT
TGACAAACCAAAAGGAGTCATAGCTATGGGAAAGAAGTTTATGTATGAAC
AACTGGAAATGAGGTCCTATCATGAGGCCCTTGTTCGAGCAGGGGATGTC
ATGGTTCAGAATTTAAAGTACAAGGATACGAAAGAAGGAATGGAGGCCTT
TCTCAAGAAAAAAAAACCTAATTGGACTCACACCCATGATAAAGATTAA
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