EMLSAT00000008145, EMLSAT00000008145-703992 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008145
Unique NameEMLSAT00000008145-703992
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s487supercontigLSalAtl2s487:142410..144801 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008145 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008145EMLSAG00000008145-690911Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000035954EMLSAE00000035954-744882Lepeophtheirus salmonisexon
EMLSAE00000035955EMLSAE00000035955-744883Lepeophtheirus salmonisexon
EMLSAE00000035956EMLSAE00000035956-744884Lepeophtheirus salmonisexon
EMLSAE00000035957EMLSAE00000035957-744885Lepeophtheirus salmonisexon
EMLSAE00000035958EMLSAE00000035958-744886Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773169auto773169Lepeophtheirus salmonispolypeptide
EMLSAP00000008145EMLSAP00000008145Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008145

>EMLSAP00000008145 ID=EMLSAP00000008145|Name=EMLSAP00000008145|organism=Lepeophtheirus salmonis|type=polypeptide|length=636bp
MFFCRSFLVKTNFKVFFKRRCFLDSKIRIKEVDLSKIPPDYIRNISIIAH
VDHGKSTLADRILEYVGAIDKSVDNKQVLDKLRVERERGITVKAQTASII
YSKGNMEYLINLIDTPGHVDFASEVTRSLKACQGVVLLVDANQGVQAQTM
SNFFAAFSEDKAIIPVLNKVDLPKADPEEVKKQMLKLFEIDPNTVIHASA
KFGIGIVDILNRVISDVPPPPVGRSDHKFRCFLQDSWYDRFKGATNLVQV
TEGVLSIGMTIASKMTDKSYSIKSLGLLTPDEFPVAKIYPGQMGYMACNM
RSPKDAIIGDTFFDKSQGSGSDIEPVVDVIPCKPMVFAGFYPIDQNEYVK
LKSAIEKVCLNDASVSVTPECCVSLGQGYRLGFLGILHLEVFSQRLDDEY
GAQVVITSPSVPYKLKVTGQSDLVLILNTSNWPDKNIEEYHEPMVRGIIL
APSDYLRACYGLIQEYRGKEVDTEYIDDTRVKIDLSIPLNEILTEFFNEL
KLRTSGFGSFDYSDDGYKRTTLTKVEILINGEPMNELARICHISKSDEIA
RKTCETLKELMPRRQFLVTIQARLNGRIIARENVKALKKDVTAKCYGGDL
SRQRKLLKNQAEGKKKLKESGKVKISKDTLIKLLSK
back to top

mRNA from alignment at LSalAtl2s487:142410..144801+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008145-703992 ID=EMLSAT00000008145-703992|Name=EMLSAT00000008145|organism=Lepeophtheirus salmonis|type=mRNA|length=2392bp|location=Sequence derived from alignment at LSalAtl2s487:142410..144801+ (Lepeophtheirus salmonis)
TGTAAATCCTAATATTATTTAATTTATTATAGTTAAAATTAACTAATTAC
TTAGGTTCCTCTGAGTTAGCATTATATATTAATCATCATTATTATAGTCC
TAGTGATATGTTCCAGAATTTCTATGGGAATATTTACATTTTTTTAGACT
CCCTTCAGAAAAATATCAATTATTAATTTCTTAAATGTTTTTTTGCCGAT
CATTCCTCGTTAAAACGAACTTTAAAGTATTTTTCAAGAGAAGATGTTTC
TTGGATAGTAAAATCCGCATAAAAGAGGTGGATCTCTCCAAAATACCTCC
AGATTATATTCGTAATATAAGTATAATTGCCCATGTGGACCATGGAAAAT
CAACTCTTGCAGATAGAATCCTGGAATATGTTGGAGCCATCGACAAGTCT
GTCGACAATAAGCAAGTGCTTGATAAACTTCGAGTTGAGCGAGAACGAGG
CATTACTGTCAAAGTAAATACAAATTTATACAGGATTTTTACTGAATAAT
TTGATTTCATTATATTCCAACTTTGCAGGCACAAACTGCTTCGATCATTT
ACTCCAAGGGCAATATGGAATACTTGATCAATTTGATCGATACCCCTGGA
CACGTAGATTTTGCATCCGAAGTGACTCGCTCACTTAAAGCATGTCAAGG
AGTTGTTCTTCTCGTTGATGCAAATCAAGGCGTTCAGGCTCAGACCATGT
CCAATTTTTTTGCAGCCTTTTCCGAAGATAAAGCTATTATTCCCGTATTA
AATAAAGTGGATCTTCCTAAAGCTGATCCTGAAGAAGTAAAGAAGCAAAT
GCTTAAACTTTTTGAAATTGATCCTAATACAGTAATTCATGCCTCTGCAA
AATTTGGTATTGGTATTGTTGATATTCTTAATAGGGTAATAAGCGATGTA
CCTCCTCCACCTGTTGGTCGTTCTGATCATAAATTTAGATGTTTCCTTCA
AGATTCGTGGTATGATCGATTTAAGGGAGCAACCAATCTTGTTCAAGTAA
CTGAGGGTGTATTATCTATTGGCATGACCATCGCTTCAAAAATGACTGAT
AAGTCTTATAGCATTAAATCCTTGGGTATTATATCGAAGACGCTCTATTG
CTTTTACTTTAACAAATATAATTTATTATTTCAGGCTTGCTCACTCCTGA
TGAATTTCCTGTAGCAAAAATATATCCTGGACAAATGGGATACATGGCAT
GTAATATGAGATCACCTAAGGATGCAATAATCGGTGACACTTTTTTTGAT
AAATCTCAAGGCTCAGGGTCAGACATTGAGCCCGTAGTTGATGTTATCCC
ATGTAAACCCATGGTTTTTGCTGGATTTTATCCCATAGATCAAAATGAAT
ATGTCAAATTAAAAAGTGCTATTGAAAAAGTCTGTCTTAATGATGCAAGT
GTTTCAGTTACACCCGAGTGTTGTGTCTCTCTTGGTCAAGGTTATCGTTT
AGGCTTTTTGGGGATTCTTCATTTAGAAGTATGTTTGTACTTGTAAAAGT
GTATGATTTTGAAAACATCTCTAACTATAGGTATTTTCTCAAAGATTGGA
TGATGAATATGGTGCTCAGGTCGTGATTACTTCTCCGTCTGTCCCTTACA
AGCTCAAAGTCACAGGTCAATCAGATCTTGTTTTAATTTTAAATACTAGT
AATTGGCCTGACAAAAATATCGAGGAATATCATGAACCAATGGTTAGAGG
TATCATTTTAGCACCGTCGGACTACTTGCGGGCATGTTACGGACTTATAC
AAGAATACCGTGGTAAAGAAGTTGATACGGAATATATTGATGATACTAGA
GTTAAAATTGATTTATCTATACCTCTCAATGAGATTTTGACTGAATTTTT
CAATGAGCTCAAGGTATGCTCCTAATTAAGATACATAACTGATTGTAGCT
AATTATAGGACATTTACTTTAGTTAAGAACATCTGGTTTTGGTTCCTTTG
ATTACAGTGATGACGGATATAAACGAACTACTCTCACTAAAGTCGAAATA
CTAATCAATGGAGAGCCTATGAATGAATTGGCCAGGATATGCCATATTTC
TAAAAGTGACGAAATTGCAAGGAAAACTTGTGAAACCCTCAAAGAATTAA
TGCCACGAAGGCAGTTCCTTGTGACTATACAAGCTAGACTGAATGGCCGM
ATAATTGCCCGTGAGAATGTTAAAGCTCTTAAAAAAGATGTCACTGCTAA
ATGCTACGGAGGAGATTTGTCTCGACAGCGAAAGCTTCTTAAGAATCAAG
CTGAAGGGAAAAAGAAGCTAAAGGAATCTGGGAAGGTGAAGATTTCAAAA
GACACTCTTATAAAGTTGTTATCGAAATAGGCAAATCAAATTGCCGAATT
TGAATTCATTCAGTTGCTTGTTAGTCAAATAATAAAATAAAA
back to top
Add to Basket