EMLSAT00000008231, EMLSAT00000008231-704078 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008231
Unique NameEMLSAT00000008231-704078
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s496supercontigLSalAtl2s496:244858..246035 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008231 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008231EMLSAG00000008231-690997Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036502EMLSAE00000036502-745430Lepeophtheirus salmonisexon
EMLSAE00000036503EMLSAE00000036503-745431Lepeophtheirus salmonisexon
EMLSAE00000036504EMLSAE00000036504-745432Lepeophtheirus salmonisexon
EMLSAE00000036505EMLSAE00000036505-745433Lepeophtheirus salmonisexon
EMLSAE00000036506EMLSAE00000036506-745434Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775196auto775196Lepeophtheirus salmonispolypeptide
EMLSAP00000008231EMLSAP00000008231Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008231

>EMLSAP00000008231 ID=EMLSAP00000008231|Name=EMLSAP00000008231|organism=Lepeophtheirus salmonis|type=polypeptide|length=301bp
MTSQFKYISLIVVLGAATTALQPGSRTRLSAQKXFNRDGRSLLNTFPFNA
GESDADHEHHEHEHHAASVAVTSASDGRVARQGETDDVTLDIGSIAAAGE
QTEYDDHIECHHSYSERCHTTYITDFEPQQEEECEENFKKSCFIEYKKVA
VDETVKFCHTPFVCEGEGPEECKTVYETECETRYHEHDNVKKYSPITECK
KVPRQLCGPSGCVPQPGPEECFDKNEVIVQEVPEEQCNLEPQKACKQVTK
LVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPTEESGLAES
I
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mRNA from alignment at LSalAtl2s496:244858..246035-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008231-704078 ID=EMLSAT00000008231-704078|Name=EMLSAT00000008231|organism=Lepeophtheirus salmonis|type=mRNA|length=1178bp|location=Sequence derived from alignment at LSalAtl2s496:244858..246035- (Lepeophtheirus salmonis)
ATGACATCCCAATTTAAGGTAAAGTATAGTTATTATKTAGAGAAAGATTG
AATATTCARATGATTTTGTTCAGTACATATCCTTGATCGTTGTACTCGGT
GCTGCTACAACCGCCCTTCAACCAGGCTCCAGAACTAGATTGAGTGCCCA
AAAGCKTTTCAATCGTGATGGTCGATCCCTACTCAACACTTTTCCATTCA
ATGCTGGAGAAAGTGATGCTGATCACGAACACCATGAACACGAACATCAT
GCTGCTTCTGTTGCAGTAACTTCTGCATCTGATGGTAGAGTTGCTCGTCA
AGGTGAAACTGACGATGTTACTCTAGACATTGGATCCATTGCTGCTGCTG
GAGAACGTTGTANNNNAAGGTTGTCATGGTTACAGAAACTGAATATGATG
ATCACATTGAATGTCACCACAGTTATAGTGAAAGATGCCATACCACCTAC
ATTACTGACTTTGAGCCTCAACAAGAGGAAGAGTGTGAAGAAAACTTCAA
AAAGAGCTGCTTCATTGAGTATAAGAAAGTTGCTGTTGATGAGACTGTCA
AGTAAGTTATCCGCTACTTCTAAGTAGTCAATATCAGGATATTATTTTTT
CCCTCCAGATTTTGCCACACTCCTTTTGTCTGCGAAGGTGAAGGACCTGA
AGAGTGCAAAACTGTGTACGAAACAGAGTGTGAAACTAGGTATCACGAAC
ACGACGTAGAAGATGATGTTGTCAATTGCGAAANNNNNCCATTCAAGAAG
AAAAGTGTGAGGATGTCACTCAGGGCTACACCACAGAGCAAAAATGTACC
AAATGGCCCAAACAAGTCTGTACTTCTGAAAAGAAGAACGTCAAGAAATA
CAGCCCTATCACTGAGTGTAAGAAAGTCCCAAGACAATTGTGTGGGCCTT
CTGGATGCGTTCCCCAACCAGGACCCGAAGAGTGTTTCGACAAAAATGAG
GTTATTGTCCAAGAAGTCCCAGAAGAACAATGTAACTTGGAACCCCAAAA
GGCATGTAAACAAGTCACCAAATTGGTTCCCAGTCTAAAGCCCGTTGAGG
AATGCGTTGACGTACCAAAAGAGGTCTGCTCCCGCTCCAGAAAGAACCCA
AGAAAGGTTCAAAAGCCCGTCGTAAAGAAGTGGTGCTATGTTCCCACCGA
GGAGTCTGGTTTGGCTGAAAGTATTTAA
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