EMLSAT00000008279, EMLSAT00000008279-704126 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008279
Unique NameEMLSAT00000008279-704126
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s4supercontigLSalAtl2s4:615076..616389 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008279 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008279EMLSAG00000008279-691045Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036760EMLSAE00000036760-745688Lepeophtheirus salmonisexon
EMLSAE00000036761EMLSAE00000036761-745689Lepeophtheirus salmonisexon
EMLSAE00000036762EMLSAE00000036762-745690Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778911auto778911Lepeophtheirus salmonispolypeptide
EMLSAP00000008279EMLSAP00000008279Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008279

>EMLSAP00000008279 ID=EMLSAP00000008279|Name=EMLSAP00000008279|organism=Lepeophtheirus salmonis|type=polypeptide|length=370bp
MLQWIKVNFITSIVCVLLIIPLNIFLIDKVSLFKYIHGTIAIILCNTTFC
FISTYDNLKSISDRFFKQLSFSNETQIPLFVKTIKNHTMFYKAKIPKDTN
FFFLETSGRSRLTLKELCALESAAKLHPKRKTFFIMTNKTYEKTAAVAEI
MEKYSNIQLLSIDLTYVFKGTVIENLWLQNRIQKSVHYNSHMSDILRYWF
VYNYGGTYLDSDVIVLKEMPINYNFAGVENVDSFLVASGIIHFTQHHKLL
KMILADISKNFDGTAWINNGPAMFTSNLIKLCKATTMETINRGKCHNIQL
LPPNAFYSIYYPSWQLYFDIGSKEVVKKQLNNSLVAHYWGKLSSKTKVKS
GMPIYDLALEKCPVIAKYFK
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mRNA from alignment at LSalAtl2s4:615076..616389+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008279-704126 ID=EMLSAT00000008279-704126|Name=EMLSAT00000008279|organism=Lepeophtheirus salmonis|type=mRNA|length=1314bp|location=Sequence derived from alignment at LSalAtl2s4:615076..616389+ (Lepeophtheirus salmonis)
ATGCTGCAATGGATAAAAGTTAATTTTATAACCTCAATTGTGTGTGTTTT
ATTAATAATCCCTTTGAACATATTCCTCATTGATAAAGTAAGTTTATTTA
AGTACATTCATGGAACTATTGCCATCATTCTATGTAACACCACATTTTGT
TTCATTTCTACAGTTTTACAAGTATGACAATTTAAAATCTATTTCTGATC
GTTTCTTCAAACAACTCTCCTTCTCAAATGAAACACAAATACCCTTATTT
GTTAAAACCATCAAAAATCACACCATGTTCTATAAAGCAAAGATTCCAAA
GGACACCAATTTCTTCTTTTTAGAAACCTCTGGAAGATCCCGATTGACAT
TGAAGGAATTATGTGCCCTAGAGAGTGCAGCTAAGTTACATCCAAAGCGA
AAAACCTTTTTTATAATGACAAATAAAACGTATGAAAAAACTGCTGCTGT
TGCTGAAATCATGGAAAAATATTCCAATATTCAACTCCTTAGCATTGACT
TAACCTACGTTTTCAAAGGAACAGTCATAGAGAATCTTTGGCTTCAAAAC
AGAATACAAAAAAGTGTTCACTATAATTCCCACATGAGTGATATTTTAAG
ATATTGGTTTGTGTACAATTATGGTGGTACTTATTTGGACTCGGACGTTA
TTGTTCTCAAGGAAATGCCGATCAATTATAATTTTGCTGGAGTTGAGAAT
GTGGATTCATTTTTAGTTGGTATGACAAACCATTTTAAGACATAAGTTGC
AGGTATAATTTATCTTTTTTCTTCACTGCAGCGAGTGGTATCATACATTT
CACTCAACATCATAAACTCTTAAAAATGATTCTTGCAGATATTTCTAAAA
ATTTTGATGGAACTGCATGGATCAATAATGGACCTGCAATGTTTACTTCC
AATCTCATCAAACTTTGTAAAGCCACAACCATGGAAACAATCAATAGGGG
CAAATGCCATAATATTCAACTTCTTCCTCCAAATGCATTTTACTCCATTT
ATTATCCATCTTGGCAATTGTATTTTGATATTGGCTCAAAGGAGGTGGTA
AAAAAGCAACTTAATAACAGTTTAGTTGCGCACTATTGGGGAAAACTTTC
CTCAAAAACAAAAGTCAAGTCAGGAATGCCCATTTATGACCTGGCCCTTG
AAAAATGCCCCGTCATTGCCAAGTACTTTAAATAGATTATGATAATATAG
ATATAAATTATACATATGTATATAAAATATTGTGAATAGATTCATGAGTC
CAATTATCAATTTGTATAAAATTTTCTTTGATTATATACTTTAGAATATT
AAAAGGGTTTCTTG
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