EMLSAT00000008317, EMLSAT00000008317-704164 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008317
Unique NameEMLSAT00000008317-704164
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s503supercontigLSalAtl2s503:424275..425910 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008317 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008317EMLSAG00000008317-691083Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036935EMLSAE00000036935-745863Lepeophtheirus salmonisexon
EMLSAE00000036936EMLSAE00000036936-745864Lepeophtheirus salmonisexon
EMLSAE00000036937EMLSAE00000036937-745865Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777538auto777538Lepeophtheirus salmonispolypeptide
EMLSAP00000008317EMLSAP00000008317Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008317

>EMLSAP00000008317 ID=EMLSAP00000008317|Name=EMLSAP00000008317|organism=Lepeophtheirus salmonis|type=polypeptide|length=257bp
MEETKVALITGASSGIGAAVLRRLASKGFIVVGCARRVELIEEIASEFPS
GRVFPYKCDITSESELKTMFDWVKDKFPETLRIVFANAGCSIDKGLMEGD
FTTWRKLMDVNLISPSALTQYAIKYWTDKSPEKGYGKIVYLNSLSAHVRV
FRDILRFYGVTKDALNSLARYWRDEVKEKYPNHSICIGEICPGLVKTDFL
GAMLGKDDIKTKHINDYFLTAPFILPEEIADAFEHMISTPKNIQIEDIVI
RNTKQVL
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mRNA from alignment at LSalAtl2s503:424275..425910+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008317-704164 ID=EMLSAT00000008317-704164|Name=EMLSAT00000008317|organism=Lepeophtheirus salmonis|type=mRNA|length=1636bp|location=Sequence derived from alignment at LSalAtl2s503:424275..425910+ (Lepeophtheirus salmonis)
AGGTGTGTAGAATTAGTTGTACCCGTAGTACTAATAAAAGATTGATAAGG
ATTTTATCTCCTTCAACTTCAAGGAATACATTCTATGCAAGATTTTCTTA
CATCAATTAAATCATAGGACTAGAATAATGGAGGAGACTAAAGTTGCTTT
GATTACTGGAGCTAGCTCGGGGATAGGAGCGGCAGTTCTGCGTCGTTTAG
CCTCAAAAGTATAATCATTTGACATTGTTCTTTATGCAGCATTAATTTTG
TGCCTAAAAATATTATAATAGGGCTTCATTGTAGTTGGATGTGCAAGGCG
AGTGGAGCTCATAGAAGAAATAGCCTCTGAATTTCCTTCAGGTCGAGTAT
TCCCTTATAAATGTGATATCACTTCTGAGTCAGAGTTAAAAACAATGTTT
GATTGGGTCAAAGACAAGTTTCCAGAGACTCTAAGGATTGTATTTGCAAA
TGCTGGATGCTCAATCGATAAAGGCTTAATGGAAGGGGATTTTACAACCT
GGAGAAAACTCATGGACGTGAATCTCATATCTCCATCAGCTTTGACACAG
TATGCCATCAAGTATTGGACAGACAAGTCTCCAGAAAAGGGATATGGGAA
AATAGTTTATCTAAATAGTTTGTCAGCGCATGTTAGAGTGTTCAGGGATA
TATTAAGATTTTATGGAGTTACAAAGGATGCCTTGAACTCTTTAGCTCGA
TATTGGAGAGACGAGGTAATTTGAAATGCTAGTAAGATATACACATAGTG
TATATGCCAGGCTTGGACCGTTCATCGTTCTTCCATTCATCTTTAAAAAA
AAAACTAACAACGACCAGGTGATCAATTTTTGAATTAACACAGATGACGT
CACTTTATAATTTTAATCGTGACGTTTGTACTTTTTATTCACTTAGCAGA
ATTAATCAAGTCCATTCATAGACGTTGCATAATTAGTTATAGAGTAATAT
TCAAGTACACTCAGAGCCTCCTAGTGCACAGAAAATATAGTAGTAGTCAA
ATAAATTTGTACCAAAATTGATCCTTGGTCGTCGTATGTCACTCGGATTT
GGCTATTTCCCTGGAATAAAAGTCCTATTTGGAGATGAATAAGGAAATAA
ATTAACGCTGCTCAAAGATTTCCCAGTAAATCCGGCAATTTTTCCCCATT
CAAATACTCAAGCGTATAAAAATGAACTGAAATAATTAATGCACTAATTG
CCTACTCTAAGCCTGGTATATGTTCATGATTATATATAACCTTTTAATTT
AGGTAAAGGAGAAATATCCTAATCATTCAATTTGCATTGGTGAGATTTGC
CCTGGTCTAGTCAAAACGGATTTTTTGGGGGCTATGCTTGGAAAAGATGA
TATAAAGACAAAACATATTAATGACTATTTTTTAACTGCCCCATTCATAC
TTCCAGAAGAAATAGCTGACGCTTTTGAGCACATGATAAGTACTCCAAAG
AATATTCAAATTGAGGATATTGTCATCAGAAATACGAAACAAGTTCTGTA
ATTTAGTTATGAAATAAAACAAATCTTTTTTGTTCCAAAAATTCATCATT
TTGTTAGTGGTGCACACTGCATTCGATACATTCTGTTACTCTTGAGATTA
TATATAAATTAATATAAGTAGAGGGTGATTGCCATC
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