EMLSAT00000008346, EMLSAT00000008346-704193 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008346
Unique NameEMLSAT00000008346-704193
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s50supercontigLSalAtl2s50:1326592..1333784 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008346 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008346EMLSAG00000008346-691112Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037087EMLSAE00000037087-746015Lepeophtheirus salmonisexon
EMLSAE00000037088EMLSAE00000037088-746016Lepeophtheirus salmonisexon
EMLSAE00000037089EMLSAE00000037089-746017Lepeophtheirus salmonisexon
EMLSAE00000037090EMLSAE00000037090-746018Lepeophtheirus salmonisexon
EMLSAE00000037091EMLSAE00000037091-746019Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780650auto780650Lepeophtheirus salmonispolypeptide
EMLSAP00000008346EMLSAP00000008346Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008346

>EMLSAP00000008346 ID=EMLSAP00000008346|Name=EMLSAP00000008346|organism=Lepeophtheirus salmonis|type=polypeptide|length=1552bp
MNKSHFKGIPSLKEEENETKDRVRELISGAFRIRQLRNSLSSMRKDIYMT
DIQIQSPRIKIVFLITEFEAAYELPTWDSRMPWALISPNEDMGFLFTAXX
GQIPFREERFETPEEVSDILDSLLKSNACPGLSEDVLLENMDKLQIADIF
LFYSEPSETPIYRSRQCRYFLCGNEELRCAPCSALFHRIQPEHFDVKPDI
HLHFSDDEDDFNHEDFYIEEIDWTEDEFVSSSPKKRPKKREWDCKQCEQS
FKNERSLKIHECTEISEPNASYHYLCSECTIQFRFGTSYIDHLFYVHRRD
PNNSELFFNEEQKLKCPYCVNEYGEPKDLEKHRASSHAGEGQAEAIIFRE
DENQAKFECFDCGKLFKLYRSYFRHRRRIHQSDIVIPCPGDPNRIIDKRC
YFCPRHFTRRGKLARHLHESHSDKDLSQIEEVQAHNPKELRVCDICGKAV
RNMSNHKENAHSDGTILKACHICGKLVKKISYRGHLVTHKQKSWLCSNCG
QGFSHKTYLERHARIHDPEYKCLPCKFCNKLFGRMDSLNKHLKSAHLDQR
DYICSTCGKAFVCKSKLNRHNVVHLNQKNYPCEACSYQCSRLDNLNAHRF
KSHGLEKTTTAAVKERLDILSNRAIAMMEEESNFREDYPSKKKKASPVKR
GGRRKKDPNAPTPPMSAXSFFFKEMQATVKAHNPEAKFGEVSKIVASMWD
TLDEEAKSTYRRRNDEDKMRYKREMDDYQSAQMNTNIHEHSPSENELLDP
EVIAIFSENSDLVTINLNASTLRNEDPSSLMNHLCVRRGCPNNAVRNSEW
EDEYCSNDCVVLHCRNSPYGNLEAVCEERAQRILGDASEKDKRRKTSSVP
QFLFRSKRLSNLPSENTFLQYVPGTQELSSTPIQSPKTDQKVRQWLXEGN
EAPSPTTILSPSRRNVSSTSSKKSLPKNRIKKSLAQDKNEDKEEVCPSPK
SSTSSLFFEPLSTTPLHCPSLPKSHILKDIVAFVDVFDDLSSCVIDELKL
LGASISSLLNKKVSHLIFKDGSLARYNKAKKLDIKIVSISWIEACKTEGK
RVDEKDFPTISKEKYDSPTMALFIKRKNNRQRMMTLSTEEKYQRHVAKIR
RRRKKEEKMTSKSPTKVEHGTPRPLSQSKNAQSTKQKGLLDQIIESNEDI
LIFPKTPPSSHKKSSQGSPSCTSILGDDFDTPLSVRVAKQFYANKRRSML
LNSDLGSSPLLGGSKEEEGQQDTQEYEISSDADPNRKRKTLQKKKNNIDY
TLKNPTRTNTKRHALYSQGHNLFSETPSPSKQIDNACKPYLSKDAEILKS
ITFKSPMKIIESESSQPLSQLTLNEKSARYGKKDNWRPSRRSSMDFVRHM
TAVTRREEISQRGLREVVCSSGTSDDIFIIKEIIPQFGFYLSKLVSSKTT
HVICCSEGPTRRTLNILRGLLRGCWIVSKDWILTSLEKGYLVDEEPYERV
DFSPAVESCRVERIAFGSYRSELLAPLGTLHVSRKSSFSSRDVGDLIRLS
GGRISQNIEKADILIGECHHENSTAICLKESWLMDSIQYNVIMPFDDYTL
NS
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mRNA from alignment at LSalAtl2s50:1326592..1333784-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008346-704193 ID=EMLSAT00000008346-704193|Name=EMLSAT00000008346|organism=Lepeophtheirus salmonis|type=mRNA|length=7193bp|location=Sequence derived from alignment at LSalAtl2s50:1326592..1333784- (Lepeophtheirus salmonis)
ATGAACAAAAGTCATTTCAAGGGAATTCCTTCCTTGAAAGAGGAAGAAAA
TGAGACAAAAGATCGAGTTCGAGAACTTATTTCAGGTGCCTTCCGCATAC
GACAGCTCCGAAACAGTCTTTCGTCCATGAGAAAGGACATTTACATGACT
GATATACAAATTCAAAGCCCTCGAATTAAAATAGGTCTTTATTCCTTGCC
CAATTTTTAAAATAATTAATATATCAAATATTTCTACTCCCTATTTATTG
CAGTATTTCTTATTACAGAGTTCGAGGCGGCCTATGAGTTGCCTACATGG
GATTCCCGTATGCCCTGGGCCCTTATTTCTCCAAATGAGGACATGGGGTT
TCTTTTCACGGCTTKGWTGGGKCAAATTCCTTTCCGAGAAGAAAGATTTG
AAACCCCAGAGGAAGTTTCAGACATTCTAGACTCTTTACTTAAGTCAAAT
GCCTGTCCTGGGCTGAGTGAAGATGTTTTACTTGAAAATATGGACAAATT
ACAGATTGCGGATATTTTCCTGTTTTACTCTGAGCCCTCTGAAACGCCTA
TCTATCGTTCAAGACAGTGCCGTTACTTTCTATGTGGGAATGAGGAGCTC
CGATGCGCTCCTTGCTCAGCATTGTTCCACAGAATTCAACCCGAACATTT
TGATGTGAAGCCAGACATTCACCTCCATTTCTCAGATGATGAAGATGATT
TTAATCATGAGGACTTTTATATTGAAGAAATTGATTGGACTGAGGATGAA
TTCGTGTCTTCTTCTCCAAAGAAGAGGCCTAAAAAAAGAGAATGGGATTG
TAAGCAATGCGAGCAGTCATTTAAAAATGAAAGATCTCTCAAAATCCACG
AGTGTACGGAAATATCAGAGCCTAATGCTTCTTACCATTATCTTTGTAGT
GAATGTACCATTCAATTTCGATTCGGTACTTCATATATTGATCATCTCTT
CTACGTTCATCGTCGCGATCCTAATAATTCAGAACTTTTCTTTAATGAGG
AACAAAAACTAAAATGCCCTTACTGTGTAAATGAATATGGAGAGCCCAAG
GATCTGGAGAAACATAGAGCCAGTTCACATGCTGGAGAGGGTCAAGCTGA
GGCCATCATCTTTAGAGAGGATGAAAATCAAGCTAAATTTGAATGCTTTG
ATTGTGGAAAGCTGTTTAAACTTTACCGTTCATACTTTCGTCATCGTAGA
AGGATTCATCAGTCTGATATTGTCATACCTTGTCCCGGAGATCCAAATCG
CATTATCGATAAACGTTGTTATTTTTGCCCAAGGCATTTTACTCGTAGAG
GTAAACTTGCTCGACATCTGCATGAATCTCACTCTGATAAAGATCTCTCT
CAAATTGAGGAAGTGCAGGCTCACAATCCTAAAGAACTCCGTGTCTGCGA
CATTTGTGGAAAAGCTGTTCGTAACATGTCAAATCATAAAGAAAATGCTC
ATAGTGACGGCACTATTCTTAAGGCCTGTCATATCTGCGGTAAACTTGTT
AAAAAGATATCTTATCGTGGGCACTTAGTGACCCATAAACAAAAGTCTTG
GCTTTGTTCTAATTGTGGTCAAGGGTTCTCGCATAAAACGTATTTAGAGA
GACACGCTCGAATACATGACCCTGAGTATAAGTGCCTTCCCTGTAAGTTC
TGTAATAAATTGTTTGGGAGAATGGACTCTTTGAACAAGCATTTGAAGTC
AGCTCACTTAGATCAAAGGGACTATATTTGCTCAACTTGTGGAAAAGCCT
TTGTCTGCAAGTCCAAACTCAATCGTCACAACGTTGTTCATTTGAATCAA
AAAAATTATCCCTGTGAAGCATGTAGTTATCAGTGTTCACGACTTGACAA
TCTAAACGCCCATAGATTCAAATCTCATGGACTTGAAAAAACTACAACAG
CCGCTGTGAAAGAGAGATTGGATATATTGAGTAAGTCGGATGTGAAACTT
CAGGCATCTACTTCTCTCATATGACAAACTCAAACTCTGCCCCTTTCTTT
GGCTAACAGTTATTAAATTTTTTGTTTTTGTTGATTTGTGATTTTGAGCC
GTTTATGTGATATGCTCAATTTTGAGAATATAAATTTCTTATGATGTTCC
TTGTTAAATATACATATACATTATGTAAATATATAGTTTAAAATAAAGTT
TATCTTTTAATTCCAGCACATCAAAACCATCAATAATCCCTTTAAAAATA
ACTCTTTAGTCGCGCAATCGCCATGATGGAAGAAGAGAGCAATTTTCGAG
AGGATTATCCTTCAAAAAAGAAGAAGGCCTCCCCTGTTAAACGAGGCGGA
AGACGAAAAAAGGATCCGAACGCACCAACMCCACCCATGTCAGCATMCTC
ATTCTTTTTTAAAGAAATGCAAGCCACAGTCAAAGCACATAATCCGGAAG
CGAAATTTGGAGAAGTATCCAAAATAGTTGCCTCAATGTGGGACACTTTA
GATGAAGAAGCCAAATCAACGTATCGTAGACGAAATGATGAAGACAAAAT
GAGGTACAAGCGTGAGATGGATGACTACCAATCCGCTCAAATGAATACTA
ATATTCATGAACATTCACCTTCAGAGAATGAGCTCCTGGATCCCGAAGTC
ATAGCCATATTCTCTGAAAATAGTGATTTAGTGACAATTAATTTGAATGC
AAGTACTCTACGAAACGAGGACCCTTCATCCCTAATGAACCATCTCTGTG
TACGCAGGGGATGCCCAAATAATGCAGTTCGGAACTCTGAGTGGGAAGAC
GAGTATTGTTCGAATGATTGTGTTGTTCTACATTGCAGAAACGTCTTCGA
GGAGTGGACACAAGATAGGACAATGCAAGAAGTTGCTTGAGCTATCATGA
CATTCTCTTACCTTTCATAATCTTTTCCTGAACTCTCTCTATTTTTTTTT
TTCATAAAAAAAAATTGTTATGCTAATCTATGATTAACACTCATGTTAAA
TGTTACTGGACAATGATATAATATGTAAATTTTCATATGCAGGACCTTTA
TTTATCCTTTGTAATTATGTATAATAGTAATTATTATCTATTTAAAAAAC
AAATCGAGGCACAATAATAATAAAATCTACATGAATCCATCAAAAGGTTT
TAAACGTCACCTTTTGTTTGAATTCGTATGTATATAAATATTGATTGAAA
ACAAATTAAAATGGAATAGAATCTTCATTAGTCTAAGAAGAATAAAAATC
CTTAAAATAACTGCTTTTAAACTGTTGCAAAGTCATGGAGCAATCCTTGA
GAAACGCATTTCCCCATTCCTGACGGAGTTTCTTTACAAGATTCCGAAGA
AGCACAGAGTCATAGAATCCACTATGCAGTTCGCGACTTCGAACATGGAT
TTTCAAAGTTTGACAAACATCCAGTAAGGACTTTTTGGAGAGGGATCCGA
GGGAAGGAAGTCTCTGTATTCCAACTAGGGGGTCACACACCCCTCGAATC
ACTTGACTGTAGGGAATGGAATAACGCTCAAAATGTTGTAGCAAGAGAGG
GGCATCGAACTTAAAGGCATTGTAAGCCAAAATGTAGATGTTATTGGATT
GGAGTTTCTTAAGCCAGGACAAGAAATCCTTCAAGACCTGAGGGGGACTC
TCTGTGAACACTTCCTTCCCCTCTTTGGAGTTAAAAAGACAGTTGTGTCT
CCTATAAAGGCCATTTATAGACGTGGCTTCCTTAGTTAAATCTTTTGTAG
GTTGCAAAAAAGCGTCAAAGAGCTGAGGGAGTCCCGTTTCGTCAGGCTCA
AGGCTGATAGCACTCAATTCAACTATGTCTGGATTCGTGAATAAGAGTCC
AGTGGACTCCACATCTAATATCACATAATATGGCTCAGCCATCATATATA
ACAAGTGGGAATCTTTATCAACATCGGTACATAGGAATGCATGTGTACTA
CATGTCATAGCAGAGAGTTAGCAAAGTTTCACAATTAATTATAGTATCAT
TTTTAAATCCTGTCCCGCACTTAAATTGTAGCACTCAGTCACGCAACCTC
TCATGCGTCACTCGCTCGGCTGGCGACAGCACTCGCCMGAGGGCGACAAC
TCAGAGTTTGCTCAATGCATTCATAAAGAAATTCTTTTCTCGAAGTGCTT
CTTCAGTATTCAATGTCTATTGAGTCAAGGAATATAATAATAATAATCGT
AAAAAATAGTAAGTAGCTATTATTAATTATTATAAATGAATAGACTTAAT
AGATACTAATTTAGAGCTGCTAGGCGGACCGAGCTCATGGCTGCGCGACT
GAGTAATACATACTAACTGACTACTTCTTGTTCGAACTCGTAGGTGCTTA
GTGATGAAACGAAATACGAGTCCAAATCCAAGCTATTGAATGAAAAGGGG
GGAATTTAAATTCGAAATGGACTCAAGTTAAAAGGACTATAACTACATTG
ATATGTGGTAGGAATTATGAAATGAATAGTATTCATTGGCAATGTTAAAT
GTGGAACTTAAAAGTGACGGGACGTCAAATGAAGGTTGAAATAGAAATAA
AGTAATAATAGATTTGGGATTGATTAGAAAATTAGATCTACTCTTGTGAG
TTCTGAGGACTCGTCATGAAGTCTTACAAKATCATTCCATCAACGCCGGA
GCGATCCACTCCAAAAAGACGTTCTTCACTCAGATCCCGGAATAGTTACG
GAGAAGTTTTGCGAGTGATTGAGACGCCGAACAACAAKGGGGAAGGAGTA
TTGGACTCGAAAAGTGTRGKGGANGGAGTCTCCCTATGGAAACCTTGAAG
CCGTTTGCGAAGAGAGAGCTCAACGGATCCTTGGTGACGCATCCGAGAAA
GACAAGAGACGGAAAACCTCCTCCGTTCCTCAGTTTTTATTTCGTAGTAA
AAGACTCAGCAATTTGCCCTCTGAGAACACGTTCCTTCAATACGTCCCTG
GGACGCAAGAGCTGTCATCCACTCCTATTCAAAGTCCCAAGACAGATCAA
AAGGTGAGACAATGGCTCAMGGAGGGAAATGAAGCCCCTTCTCCTACCAC
AATTCTTTCACCCAGTCGAAGAAACGTCTCTTCCACTTCCTCCAAAAAGT
CCCTTCCAAAGAATAGAATAAAAAAATCTCTAGCTCAAGACAAAAACGAG
GATAAAGAAGAAGTGTGCCCCTCTCCTAAAAGTTCTACGTCCAGTCTCTT
TTTCGAACCCCTATCTACGACTCCGCTTCATTGTCCCTCCCTTCCCAAAT
CTCATATTTTGAAAGACATTGTTGCTTTTGTGGATGTGTTTGATGATTTA
TCGAGTTGTGTTATAGATGAGCTCAAACTTTTAGGTGCCTCCATATCCTC
ACTTTTAAATAAAAAAGTATCACATTTAATTTTCAAGGACGGGTCTCTTG
CTCGGTACAATAAAGCAAAGAAGTTAGATATTAAAATTGTGTCCATTAGT
TGGATTGAAGCCTGTAAGACAGAAGGGAAAAGAGTGGATGAAAAGGACTT
CCCCACGATATCCAAGGAAAAGTATGACAGCCCAACCATGGCACTCTTTA
TAAAGAGAAAAAATAACCGTCAACGAATGATGACCCTTAGCACTGAAGAA
AAGTATCAAAGACATGTTGCAAAGATAAGGAGGAGAAGGAAGAAAGAGGA
AAAGATGACCTCAAAGTCTCCAACCAAAGTAGAACATGGAACTCCCCGAC
CATTATCCCAGTCCAAAAACGCACAAAGTACGAAACAAAAAGGTTTATTA
GATCAAATCATAGAGTCCAATGAGGATATACTCATCTTTCCAAAGACTCC
TCCCTCATCTCATAAGAAATCATCACAGGGATCTCCCTCCTGTACGAGTA
TTCTAGGTGACGATTTCGACACTCCACTATCCGTGAGAGTCGCGAAACAA
TTCTATGCCAATAAAAGGCGCTCCATGCTTCTTAATTCAGATTTAGGATC
TAGTCCTCTTCTCGGAGGCTCAAAGGAGGAGGAAGGGCAACAAGATACAC
AGGAATACGAAATATCGTCAGATGCAGATCCAAATAGAAAACGCAAGGTA
CGTTGATAAGATTGTATCCCTCATTATTTTTAAGCCCGTATATTTATTTC
ATTTATGAACAGGCAAATTCAAGCATATTCGACTGTTCAGTTACTAGGTA
AAGAAATTATGAATTTATTTTATTCATTTTTCAATATCATTACTTTTAAT
CAAAGTTGTGTAATATTATCTACTCTTTTTTTTCATCTATCTATACCCTT
TATGTTTCAAAGTATTATAAGTATAATGACCTAATTATATATTTTACTTA
GACGCTTCAAAAGAAGAAGAACAACATCGATTATACTCTAAAGAATCCAA
CACGAACTAATACAAAACGACATGCTCTTTATTCTCAAGGACATAATTTA
TTCAGTGAAACACCCTCACCATCTAAACAGATAGACAACGCTTGCAAACC
ATACTTATCTAAAGACGCGGAAATCCTAAAGTCAATTACGTTCAAAAGCC
CCATGAAGATTATCGAGAGTGAGTCCTCACAGCCTCTCTCTCAATTAACC
TTAAATGAAAAAAGTGCAAGGTATGGTAAAAAAGACAACTGGAGACCATC
TCGTCGTAGTTCAATGGATTTTGTTAGGCATATGACTGCTGTAACTCGAA
GAGAAGAGATTTCTCAACGAGGACTTAGAGAAGTCGTCTGCTCCTCTGGA
ACATCTGATGATATTTTCATCATAAAGGAAATCATTCCTCAATTCGGCTT
CTACTTAAGTAAATTAGTTTCTTCCAAGACAACCCATGTCATATGTTGCT
CCGAAGGGCCAACGAGAAGAACTCTAAATATTTTACGTGGTCTACTTCGG
GGTTGTTGGATTGTTTCAAAGGACTGGATATTGACCTCTCTGGAAAAGGG
ATATCTTGTTGATGAGGAACCGTACGAGAGGGTTGATTTCAGCCCTGCTG
TTGAGTCATGTCGTGTTGAGCGTATTGCTTTTGGTTCATATCGCTCCGAA
CTCCTTGCTCCTTTGGGCACACTTCATGTAAGTCGTAAGTCATCATTTTC
TTCGAGGGATGTTGGAGATCTTATTCGATTGTCGGGAGGTCGAATTTCTC
AAAATATTGAAAAAGCAGATATCCTAATTGGAGAATGCCACCATGAAAAT
TCAACTGCCATTTGCCTTAAGGAATCCTGGCTAATGGACTCCATTCAATA
TAATGTCATAATGCCTTTTGACGACTACACATTGAACTCTTAG
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