EMLSAT00000008367, EMLSAT00000008367-704214 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008367
Unique NameEMLSAT00000008367-704214
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s510supercontigLSalAtl2s510:291080..292438 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008367 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008367EMLSAG00000008367-691133Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037154EMLSAE00000037154-746082Lepeophtheirus salmonisexon
EMLSAE00000037155EMLSAE00000037155-746083Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775941auto775941Lepeophtheirus salmonispolypeptide
EMLSAP00000008367EMLSAP00000008367Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008367

>EMLSAP00000008367 ID=EMLSAP00000008367|Name=EMLSAP00000008367|organism=Lepeophtheirus salmonis|type=polypeptide|length=370bp
MDDEDNQNLVSTQILSTLKTDMAQEDNLQSIEMVNWIAYNFIAYIIVSIG
IIGNILNLVVLSRPNLKGVMYVYLLGLAVSNLAXLISAIPALANLVNGKS
DNSNYYGAFFQAHMEIPLLNSFMASSVYIIICMTVNRYISIYKPTHFQRI
HTYKNARIAITCSFLGGTLLHIPLCFEKQVLSNCTNLTGIMEHCTWKSED
NKAVTDEQLFQVYLYISETLLRFGPIITLAILNILIITRFRRIARKQRML
VIVLIAIVILFVCCTTPAGFLSIFINIRRGNNLGFAVFRATANNLELLNF
ALNFYIYCLCSAEIRKAFVSLFHSSISSSYRFIREKAKKKNFGSLNPDTE
MGTSKNNKLLAPKIKNGELV
back to top

mRNA from alignment at LSalAtl2s510:291080..292438+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008367-704214 ID=EMLSAT00000008367-704214|Name=EMLSAT00000008367|organism=Lepeophtheirus salmonis|type=mRNA|length=1359bp|location=Sequence derived from alignment at LSalAtl2s510:291080..292438+ (Lepeophtheirus salmonis)
ATGGATGATGAAGATAATCAAAACCTTGTCTCGACACAAATATTATCAAC
ACTCAAAACAGATATGGCTCAAGAGGATAATTTACAATCCATAGAAATGG
TGAATTGGATTGCCTATAATTTCATTGCTTACATCATTGTTTCCATTGGG
ATCATAGGAAATATTCTCAATTTGGTTGTTTTGTCAAGGCCAAATTTAAA
GGGGGTAATGTACGTGTATCTTCTAGGTTTGGCTGTCTCGAATTTGGCAG
KTCTCATATCCGCCATCCCAGCTCTAGCAAATTTAGTGAATGGGAAGTCA
GATAATTCAAACTACTATGGAGCATTCTTTCAGGCTCATATGGAAATTCC
CTTGCTTAATTCTTTTATGGCATCTTCTGTGTATATCATCATTTGCATGA
CAGTCAATCGCTACATTTCAATTTACAAGCCCACACATTTTCAGCGAATA
CATACGTATAAAAATGCAAGGATAGCCATCACTTGCAGCTTCTTGGGCGG
AACACTCTTGCATATCCCACTTTGTTTTGAGAAGCAAGTTTTGTCTAATT
GCACGAATTTAACAGGGATCATGGAACATTGCACCTGGAAAAGTGAGGAC
AACAAAGCTGTAACAGATGAACAACTTTTCCAAGTTTACTTGTACATCAG
CGAGACTTTACTACGATTTGGGCCCATCATCACTCTTGCCATTCTCAATA
TTCTCATTATCACACGTTTCCGCCGTATCGCAAGAAAACGTCAGGACTTA
AGATCTGGACTGAATCCAAGCCGCAATGGTCCTTTTTCATCAACCAGTAG
CCATTGTACACAACAGCAACATCTCCTTGTATCCAATGGTATAGGAGAAA
CGTCTTTAATTCGATCAACAACCAATGTAAACGAAGATACGAATTATTTG
AGTGTAAATGGAAATGGAAATACACGCCGTGCTCCCTCTTCCTTACGCTC
TTCCAGCCGACGAAAGGGTCTTCATAACCCAGAAGAAAGAATGCTTGTCA
TTGTGTTAATTGCAATTGTCATTCTATTTGTTTGCTGTACAACCCCTGCA
GGTTTTCTCTCTATATTCATCAATATCCGTCGAGGAAACAACTTGGGATT
TGCCGTCTTTCGAGCGACTGCAAATAATTTGGAACTGCTTAACTTTGCAT
TGAACTTTTATATTTACTGTCTTTGCAGTGCTGAAATTAGAAAAGCGTTT
GTTTCCCTTTTTCATTCATCTATATCCAGCTCTTATCGCTTTATTCGAGA
AAAAGCAAAGAAGAAAAATTTTGGTTCCTTAAATCCAGACACTGAAATGG
GAACTTCTAAAAACAACAAACTACTCGCTCCAAAAATCAAAAATGGAGAA
TTAGTTTGA
back to top
Add to Basket