EMLSAT00000008374, EMLSAT00000008374-704221 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008374
Unique NameEMLSAT00000008374-704221
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s511supercontigLSalAtl2s511:283478..284411 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008374 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008374EMLSAG00000008374-691140Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037178EMLSAE00000037178-746106Lepeophtheirus salmonisexon
EMLSAE00000037179EMLSAE00000037179-746107Lepeophtheirus salmonisexon
EMLSAE00000037180EMLSAE00000037180-746108Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775806auto775806Lepeophtheirus salmonispolypeptide
EMLSAP00000008374EMLSAP00000008374Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008374

>EMLSAP00000008374 ID=EMLSAP00000008374|Name=EMLSAP00000008374|organism=Lepeophtheirus salmonis|type=polypeptide|length=92bp
MLELKIDPSCMNPDMVNLFQDESFHLHIQYYKDPKNRVYPTEVAHKRLFL
SKKYRYILPDISENYLKVHKDTRQVIYGLQPDGINEHRNMNL
back to top

mRNA from alignment at LSalAtl2s511:283478..284411+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008374-704221 ID=EMLSAT00000008374-704221|Name=EMLSAT00000008374|organism=Lepeophtheirus salmonis|type=mRNA|length=934bp|location=Sequence derived from alignment at LSalAtl2s511:283478..284411+ (Lepeophtheirus salmonis)
ATGCTAGAGCTCAAGATCGATCCGAGTTGCATGAATCCAGAGTGAGGCAT
TGATTTTGTATCTCTTTGGAAACCCTCAGGTATTTCCCATCTAATATGAT
GACCACTATTTTTGAGTGACTCAAATCCGAATGAGTGAATGCCATTGACG
CTAAAGTTAATATCTTAGTGAATCATGCTTCTGAAGAAGTCATTTCTGCT
GTGTAGCGCTTAGGACGAACCATCACCATAGCTTAATATGATATTTTCTA
TGTTGAAGCCCTCATTAATCCCACCAAATTTTTTTCAGTATGGTGAACCT
ATTTCAAGATGAAAGTTTCCACCTGCACATTCAATATTACAAAGATCCTA
AAAATAGAGTTTATCCCACGGAAGTGGCTCATAAACGACTTTTTTTGTCG
AAAAAATATAGATATATTCTTCCAGATATTTCAGAGAACTACTTAAAAGT
ACATAAGGATACAAGACAAGTGATCTATGGACTCCAACCGGATGGGTAGT
TAACCTTAAGGAAAAAGTTATCTATAAATCCCTTGATACATATTTGCTCG
ATTAATATCAATTGTAGAGCTGTATTTAAAAAAATCAAACATTGATTAAT
TATTATAGCAAAATTGTTATTTTTTTACCTCTACAAATTTATTCCTTGTA
CTATTTAAAATATAGTTTAATTACTTATATAATTAAAAAACGAATAATAA
TAAGAATATTATTTTGTTGATAGAAATGGATGATAATTTATTGAAGGAAT
TCCAATGTTTTTCATATTAAATTTTGAGAAAAATCCTTCTAGTATGTATG
AAATATTTTGTAAGCAAAAATACAAATACACGTTGCATCACTAATATAAA
TGCAAGATATTCTTAAATAGATATATTTTTTATAAATATTAAATTTCTTT
TAGGATCAACGAACATAGAAATATGAATTTATAA
back to top
Add to Basket