EMLSAT00000008375, EMLSAT00000008375-704222 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008375
Unique NameEMLSAT00000008375-704222
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5127supercontigLSalAtl2s5127:4369..5259 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008375 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008375EMLSAG00000008375-691141Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037181EMLSAE00000037181-746109Lepeophtheirus salmonisexon
EMLSAE00000037182EMLSAE00000037182-746110Lepeophtheirus salmonisexon
EMLSAE00000037183EMLSAE00000037183-746111Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768462auto768462Lepeophtheirus salmonispolypeptide
EMLSAP00000008375EMLSAP00000008375Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008375

>EMLSAP00000008375 ID=EMLSAP00000008375|Name=EMLSAP00000008375|organism=Lepeophtheirus salmonis|type=polypeptide|length=198bp
MVENRTGLIVNISSGGGLKYLVYVNYGIVYVNYGIGKAACDRMAADCSVE
LKNKNVTMVSQLARPENHEARXSHKIMFGSGESTEFTGMAIVKLASDQNK
IQCTGNILFKRKXXXXXXXXXXXXXXXFTNDMFNTLENHEARYSHKIMFE
SGESTEFTGMAIVKLASDQNKIQCTGNILFKRKYDIKNLNSTTTGDMF
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mRNA from alignment at LSalAtl2s5127:4369..5259+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008375-704222 ID=EMLSAT00000008375-704222|Name=EMLSAT00000008375|organism=Lepeophtheirus salmonis|type=mRNA|length=891bp|location=Sequence derived from alignment at LSalAtl2s5127:4369..5259+ (Lepeophtheirus salmonis)
ATGGTAGAAAATAGAACTGGCCTAATTGTGAACATCAGCTCTGGTGGTGG
ACTCAAGTATTTAGTTTACGTAAACTACGGAATTGGTAAGGCAGCATGTG
ATTGAATGGCTGCTGATTGTTCTGTAAAACTTAAAAATAAGAATGTCACA
ATTGTCTCTCTATGGCGAGGCCWGGTGAAAACTGAGGAAATAACAAATAG
GGTTTTGGGTTCGTATACACGCATGTTACATCAAAGATGCATTTAGTTTA
CTAATGATATGTTTAACNCAAGTATTTAGTTTACGTAAACTACGGAATTG
GTAAGGCAGCATGTGATCGAATGGCTGCTGATTGTTCTGTAGAACTTAAA
AATAAGAATGTCACAATGGTCTCTCAATTGGCAAGGCCTGGTGAAAACTG
AGGAAATAACAAATAGGGTTTTGGGTTCGTATACACGCATGTTACATCAA
AGATGCATTTAGTTTACTAATGATATGTTTAACACTCTAGAAAATCATGA
GGCACGATKAAGTCACAAAATAATGTTTGGATCAGGAGAATCAACYGAGT
TCACGGGGATGGCGATCGTCAAATTAGCATCAGATCAAAATAAAATTCAA
TGTACAGGGAATATTCTATTTAAAAGGAAATANNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTTACTAATGATATGTTTAACACTC
TAGAAAATCATGAGGCACGATATAGTCACAAAATAATGTTTGAATCAGGA
GAATCAACAGAGTTCACGGGGATGGCGATCGTCAAATTAGCATCAGATCA
AAATAAAATTCAATGTACAGGGAATATTCTATTTAAAAGGAAATATGATA
TAAAGAACTTGAACAGTACAACAACAGGAGATATGTTTTGA
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