EMLSAT00000008380, EMLSAT00000008380-704227 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008380
Unique NameEMLSAT00000008380-704227
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s512supercontigLSalAtl2s512:228618..229594 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008380 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008380EMLSAG00000008380-691146Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037198EMLSAE00000037198-746126Lepeophtheirus salmonisexon
EMLSAE00000037199EMLSAE00000037199-746127Lepeophtheirus salmonisexon
EMLSAE00000037200EMLSAE00000037200-746128Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774902auto774902Lepeophtheirus salmonispolypeptide
EMLSAP00000008380EMLSAP00000008380Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008380

>EMLSAP00000008380 ID=EMLSAP00000008380|Name=EMLSAP00000008380|organism=Lepeophtheirus salmonis|type=polypeptide|length=92bp
MKSFNNKITQRDMVNFFYIKTPHLSGSHRQLSTILFLFFLLVNLVSGKAT
SEIHNERIARSVDQHGTGITRNLVAKFGKRPEDMYSFGIVSK
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mRNA from alignment at LSalAtl2s512:228618..229594-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008380-704227 ID=EMLSAT00000008380-704227|Name=EMLSAT00000008380|organism=Lepeophtheirus salmonis|type=mRNA|length=977bp|location=Sequence derived from alignment at LSalAtl2s512:228618..229594- (Lepeophtheirus salmonis)
ATGAAGTAATTTGATCCTTTTCCTCATTTTCTCAACCTACACGGATAGAA
AAACTTTTTGATAATTGTTGTTTAATAAAAAGTAATTGATATCATGAATA
ATTAAATTTGTTTTCATGATCAATTATTTTACAAAAAAATATCCTTTGTT
TCCTGGGGGATTAATGATGAATTACCTATGAGTGCCATATTGAATTACAA
TTTCCATATGAACACTCTTGTCAGCATAGATTATATGAATGCATGTAAAA
CTATCTTCGACGTAGATAATTGGGTTCCTACTAAATCACACACCGCTTCT
GTTTTTAAGTGCCCTCATATTCGTTAATAATAAGGATTTATCATGTTCAT
AAATTTCATCTATAGAGTTTTATATAATATCTCCATTTTAGATCATTTAA
CAACAAAATCACCCAAAGGGATATGGTCAACTTCTTTTACATTAAGACAC
CTCATTTGTCTGGAAGCCATCGTCAGCTCTCCACAATTTTATTCCTTTTT
TTCCTCCTTGTGAACCTCGTCTCGGGAAAAGCAACATCAGAGATTCATAA
CGAGCGAATTGCTCGTTCTGTGGACCAACATGGAACGGGGATCACAAGGA
ACCTGGTTGCCAAGTTTGGAAAAAGACCTGAGGATATGTACTCATTTGGA
ATAGGTAAATCCAGGGTTTTAGCATGTTGCTCTTAGTATGAAATAAATAC
ACAACTAAAACATAGGAATAATGGGTAAAATAAACTCATTTACCTACCAT
CTTATGAGCATGTCTTCATAAAAATAATTGAATCCTCTTTGTAAAGTCTT
ATCTTTTGCTAGAGTTAAGATAAAATTACTTTATTTTTATTGCCAAATAA
GTTAAGGTTATCTTTTTTGATAGCCTTCCCATAAAAATGTGTGTATAATT
GAATATTGAGCTAACTTGGATGAAGAACAAATGTACATTGAGCATTTAAA
TTAATTTATTTTAAAGTAAGCAAATGA
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