EMLSAT00000008385, EMLSAT00000008385-704232 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008385
Unique NameEMLSAT00000008385-704232
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s512supercontigLSalAtl2s512:356044..357420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008385 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008385EMLSAG00000008385-691151Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037223EMLSAE00000037223-746151Lepeophtheirus salmonisexon
EMLSAE00000037224EMLSAE00000037224-746152Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776807auto776807Lepeophtheirus salmonispolypeptide
EMLSAP00000008385EMLSAP00000008385Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008385

>EMLSAP00000008385 ID=EMLSAP00000008385|Name=EMLSAP00000008385|organism=Lepeophtheirus salmonis|type=polypeptide|length=271bp
MRLRRTLRGHLAKIYAMHWAYDSRKLVSASQDGKLIIWDSYSANKVHAIP
LRSSWVMTCAYAPSGNFVAXGGLDNICSIYNLKSREGSVRVSRELPGHTG
YLSCCRFLDDNLIITSSGDMTCAQWDIETGKQTTTYNGHTGDVMSLSLSP
DSKTFVSGACDASAKLWDVRDGMCKQTFHGHESDINAVTFFPQGTAFSTG
SDDATVKLYDIRSDQELAQYSHDNIICGVTSVAFSKSGRLLMAGYDDFNV
NIWDTLRLERVERGHKFKFYI
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mRNA from alignment at LSalAtl2s512:356044..357420-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008385-704232 ID=EMLSAT00000008385-704232|Name=EMLSAT00000008385|organism=Lepeophtheirus salmonis|type=mRNA|length=1377bp|location=Sequence derived from alignment at LSalAtl2s512:356044..357420- (Lepeophtheirus salmonis)
ATGCGACTCCGAAGAACCCTGAGGGGCCATTTAGCTAAAATCTACGCCAT
GCATTGGGCCTATGACAGTCGCAAACTCGTGTCTGCCTCTCAAGATGGGA
AATTGATAATCTGGGATAGTTACAGTGCCAACAAAGTGCATGCCATACCC
CTGCGATCCTCGTGGGTCATGACCTGCGCTTACGCTCCATCAGGGAATTT
CGTGGCTTKTGGAGGATTAGATAACATTTGTTCCATATACAACTTGAAGT
CTCGAGAGGGAAGTGTTCGTGTGAGCCGCGAGCTACCCGGCCACACGGGT
TACTTGAGCTGCTGCAGGTTTCTGGATGACAACTTGATCATAACGAGCAG
CGGAGACATGACCTGCGCTCAATGGGATATTGAAACTGGGAAACAAACAA
CTACCTACAATGGCCATACAGGAGATGTCATGTCCTTGTCTCTCTCTCCG
GATTCAAAGACTTTTGTGTCTGGKGCTTGTGATGCATCTGCTAAACTCTG
GGACGTTCGAGATGGAATGTGCAAGCAAACGTTTCACGGCCATGAGAGCG
ACATCAATGCAGTTACATTTTTTCCTCAAGGGACTGCCTTTTCTACTGGC
TCTGATGACGCTACAGTTAAGCTTTATGACATCCGTTCCGACCAAGAGTT
GGCACAATATTCACATGATAATATCATCTGTGGTGTGACGAGTGTGGCTT
TTTCAAAGTCAGGAAGACTTCTCATGGCCGGATATGATGATTTCAATGTC
AATATATGGGATACTCTCAGACTAGAACGTGTCGGTGTATTGGCTGGRCA
TGACAAWCGTGTCAGKTGCTTAGGAGTTACAGATGATGGTATGGCTGTAT
GCATTGGCTCGTGGGATAGCTTTTTAGGGATTTGGAACTAATTTATGGAT
GTCATTTCTAGTATTTACTTGTGTTTATCATCATTAGTGTGATAATTGTT
CCGACAATTCTTGGATAACAGGAACATTTGGATTTATATTTTTTCAAATT
AGTTACTCAGTTTTTTTTTAACTTTCTGGACATGGACTGTGCTTTAAAAA
AATGATTTTTTTACACGATGAAAAAAAAAAATGTTTGTCGAAGAGCATCA
CAATTATAATAGTACATCTATGAAAATCTTCCACTATTGTCCGAAGGGAC
AAAAAGTTTATCCATCTTTCGGACTTGCCAAGACAAAGAGAAAAAAAATC
ATTTCCATATGAGAGGTTAAAGCAAAAATATTATCTTCGACTTTTTATAC
TCATCAATAATGGTACTTTTTTCTATCTGATATACTTATCTCCTCTCCTC
ATAAAGTCCTACAAACTTTTTTTTAACTTAATTTTTTTTTTAAAGAACGT
GGTCACAAATTTAAGTTTTATATATGA
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