EMLSAT00000008419, EMLSAT00000008419-704266 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008419
Unique NameEMLSAT00000008419-704266
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s515supercontigLSalAtl2s515:105196..106792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008419 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008419EMLSAG00000008419-691185Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037363EMLSAE00000037363-746291Lepeophtheirus salmonisexon
EMLSAE00000037364EMLSAE00000037364-746292Lepeophtheirus salmonisexon
EMLSAE00000037365EMLSAE00000037365-746293Lepeophtheirus salmonisexon
EMLSAE00000037366EMLSAE00000037366-746294Lepeophtheirus salmonisexon
EMLSAE00000037367EMLSAE00000037367-746295Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772264auto772264Lepeophtheirus salmonispolypeptide
EMLSAP00000008419EMLSAP00000008419Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008419

>EMLSAP00000008419 ID=EMLSAP00000008419|Name=EMLSAP00000008419|organism=Lepeophtheirus salmonis|type=polypeptide|length=368bp
MKNHLVITLLSSLFFSLCLSDENVSDEGSCRVLVDAHDRAAMYSRNFIGG
RSNRWPNGIVPYTISSSFSSSQRQTIMNSIQHISDRTCVKFVERTNEANY
VDIFTGGGGCYANLGYNSRRSRSVLHLQSNGCVYLGTVVHELLHILGFGH
EQTRAXRDQYVTINXQTRADRDQYVTINWGNIQSGTYSNFWRALGENEAA
SIPYCGNVGIDQYDSCYAGFRTSTFGLAYDYGSVMHYGLTYFSTNGQNTM
SLKKSTTARIPNRSGMSNLDAQKTKAAYECQDTVTAQASTTSPGPTASTT
KPCVDEYRYCSNYKSYCGKHWYINKNCKKTCFNCVCENKIADESCTNLKS
YCAYSFIRTRCLKTCGKC
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mRNA from alignment at LSalAtl2s515:105196..106792+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008419-704266 ID=EMLSAT00000008419-704266|Name=EMLSAT00000008419|organism=Lepeophtheirus salmonis|type=mRNA|length=1597bp|location=Sequence derived from alignment at LSalAtl2s515:105196..106792+ (Lepeophtheirus salmonis)
GCTTCAGATCGCATTTAATTGATCACAATGAAGAATCATTTAGTAATAAC ACTATTGAGCTCATTATTCTTTTCACTCTGCTTGAGTGATGAAAATGTTT CCGATGAGGGAAGCTGTCGAGTTTTGGTGGATGCCCATGACAGAGCTGCT ATGTATTCAAGGAACTTTATTGGAGGYCGAAGCAATCGATGGCCCAATGG CATTGTTCCATACACAATCAGCTCAAGTTTCTCTTCAAGTCAAAGACAAA CTATCATGAATTCAATTCAGCACATTTCGGATCGAACATGTGTCAAATTT GTTGAAAGAACAAATGAAGCGAATTATGTAGATATCTTCACTGGCGGAGG TGGATGCTATGCTAATCTTGGCTACAATAGTAGGAGATCAAGGAGTGTAC TTCACTTACAGAGCAATGGCTGTGTGGTATGACTATTATCATTAAATTAA ATAAAAATTACTAACAATAATTTTCTATTAAGTATTTGGGAACTGTTGTT CATGAACTCCTCCACATCCTTGGATTTGGTCATGAACAAACAAGGGCTGA WCGAGACCAATATGTTACAATTAATTNACAAACAAGGGCTGATCGAGACC AATATGTTACAATTAATTGGGGAAATATACAAAGTGGAACCTACAGCAAC TTTTGGAGAGCTCTTGGGGAGAATGAAGCTGCATCTATCCCATACTGTGG AAATGTAGGCATTGATCAGTATGACAGTTGTTATGCAGGCTTTAGAACTT CAACATTTGGTTTGGCTTACGATTATGGATCCGTTATGCACTATGGACTG ACATAGTAAGGTCCATCAAAAACCATATAGGATTAAATTAATTTAAAAAA ATCTTTTCCCCTGTGATTAGCTTTTCGACTAATGGTCAAAACACAATGTC YTTGAAAAAGTCGACAACTGCTCGCATTCCTAACAGAAGTGGAATGAGTA ATTTGGATGCTCAAAAGACCAAAGCAGCCTATGAATGCCAAGATACTGTC ACAGCTCAAGCTTCTACTACATCTCCAGGACCCACAGCTTCAACTACTAA GCGTAAGAAATATTTACCAAGTTTTTAAAACCCTAATTACAATTTATCCA TTTTTCAGCTTGTGTTGACGAATATAGGTATTGTAGCAATTATAAATCTT ATTGTGGAAAACATTGGTATATTAACAAAAATTGTAAAAAGACTTGCTTC AATTGTGGTATGTAATTAACTAAATGTTTTGCATTCAATAATTAAATAAT GTACTATTTTTGTATCCCTGTTTTAGTATGTGAGAACAAAATCGCGGATG AGAGTTGTACAAACCTTAAAAGTTATTGCGCATATAGTTTCATCAGAACT AGGTGTCTTAAAACTTGTGGAAAATGTTAAAGGAATAATTTATTATGTAT ATTTTCCATTTGATCAAATTAATTATTATGCTACCAAATATTTAAATAAA TTGACTCTTTCTTGCATTTTAAAAAGTTTAGACTATTTGTGGAAATGTTG TTTACTAATCTACATATTTGTCAAAAAATATGTCGTCTTATGACATTGTA AATTTCTCAACATTAAATAATTTACACTCGGAGAAGCTTCAGTTGGC
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