EMLSAT00000008422, EMLSAT00000008422-704269 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008422
Unique NameEMLSAT00000008422-704269
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s515supercontigLSalAtl2s515:217255..219696 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008422 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008422EMLSAG00000008422-691188Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037376EMLSAE00000037376-746304Lepeophtheirus salmonisexon
EMLSAE00000037377EMLSAE00000037377-746305Lepeophtheirus salmonisexon
EMLSAE00000037378EMLSAE00000037378-746306Lepeophtheirus salmonisexon
EMLSAE00000037379EMLSAE00000037379-746307Lepeophtheirus salmonisexon
EMLSAE00000037380EMLSAE00000037380-746308Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774709auto774709Lepeophtheirus salmonispolypeptide
EMLSAP00000008422EMLSAP00000008422Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008422

>EMLSAP00000008422 ID=EMLSAP00000008422|Name=EMLSAP00000008422|organism=Lepeophtheirus salmonis|type=polypeptide|length=432bp
MKRSFTFMIFGLLAWNTSKAQNVAQECPEENGYYADSVQCDRYYQCQDGQ
IYDKLCPDGLVFDESSTNFAKCSFQFSVDCTGRPELQPAQGYNACPRLNG
YFPHEDPKVCDKFYFCVDGVANPITCPASLIFDPSKGQCAYSDQIERKGC
SGQEVFHFECPSEGKFEHEHPRFPDPDDCQFFYICINGVNPRRNGCTDGL
VFNKKSLACERPDNVEDECKTWYNETFLEGLKQKSHQNLRPITSLKTRKR
VKVIRKNPNAILSAGERPGAQPPSFQDPRVGTGGAFPISPQAEPIENRPV
GSRSRVRQRRPAARPVLKAQEFEEEVPEGPPAFALNDQDSIQQFRRNHGF
NNGGGNSRLTILQTPTNPLAPVESVTPIEEEDPSPPVPSRRQRPPHRRRP
ISQQRTSSPASRGGEGDNGGRRQEFDSFQARF
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mRNA from alignment at LSalAtl2s515:217255..219696+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008422-704269 ID=EMLSAT00000008422-704269|Name=EMLSAT00000008422|organism=Lepeophtheirus salmonis|type=mRNA|length=2442bp|location=Sequence derived from alignment at LSalAtl2s515:217255..219696+ (Lepeophtheirus salmonis)
CGAAGATGAAGAGCCAAATACACACTATATTGTACCCACGTTTCAATATA
TTTTTCTAATGCTAACTAACAAATATAAAATAACATTAAGTTCTCGTGTA
AAGACTAAAAATGTACATATTTCACCCTATGAAGGCCCATCAAAAAAGTA
TATGTATTATTTTGTCTAGTATTCCCACGTTGTATGCCAAATGTGTTGAT
TCAAATACATATGATGTGAGTAAAAATGTTGTATGTCGGTATCTACAATA
TTTATCTCATAAAGTTGGTTCACTTTGTTATATGAATTACGCGCTCCCTC
CAATGAGCCCTCAAAGAATCTTAGCCTAATCAACATTTATTTCTCTTGCC
TTACGGATAAATATCATTTAGTATGTTTCTTGGAAGGGTTTGGACCAGAT
CTCCTTCAACTGCTATTCCCTCCCAAGTCTGTATAAAGAATTTATAATAA
TATCATCATGAAAAGAAGCTTCACTTTCATGATATTCGGACTCCTGGCTT
GGAATACATCTAAGGCTCAAAACGTGGCTCAGGAATGCCCTGAAGAAAAC
GGGTACTATGCTGATTCTGTTCAGTGTGATCGTTACTACCAGTGTCAAGA
TGGACAAGTGTGTTTTTTGAGTCCTTTAAACGTTTTCATACAACTAATTT
TGTTTTACATGATATGCTTAGATCTACGATAAATTATGCCCTGATGGTTT
AGTCTTTGATGAGTCCAGCACTAATTTTGCTAAATGTAGTTTCCAGTTCT
CTGTGGATTGTACGGGTCGTCCAGAACTACAGCCAGCTCAAGGATATAAC
GCTTGTCCCAGATTAAATGGTTACTTTCCTCATGAGGATCCAAAGGTAAT
TTTATTCCTTGTAATTTTGCAATCGAGTCTCTGGGACCGGAATTAATATC
AAATGCCCAAGAAAAGAGATTAATTCAAGGTCAGAGAAGGAGATATTGTA
AGGACTCTGATTTGCAATGATATGTATATATATTTTGCAATACTCTTCCT
TGATTCGCACTTATTTGAATACATATTTTACTCAGGTTTGTGATAAGTTT
TACTTCTGTGTTGATGGAGTTGCTAATCCGATTACGTGTCCAGCAAGTTT
AATTTTTGATCCCTCAAAAGTAAGGATTTTGTAATCACACTTTTCATCTG
TCTGTTTTATATCCATACACATATTATTTAAGGGTCAATGCGCCTATAGT
GATCAAATTGAAAGAAAAGGATGCTCTGGTCAAGAAGTGTTTCATTTTGA
ATGCCCTTCTGAAGGAAAATTTGAACATGAACATCCAAGATTTCCTGATC
CTGATGGTAAGTTTAAATTGGTATTGCTGTGTTCATCCATCATTCTTCAT
CATATATGTATTTTTTTAATAAGAAAATTTTGTGGCAGAGGAAGAGATCC
TCCCCCCCCCCCCCCTCTCTATAATTTATTCAAGGTTAATTTTTTACTTC
ATCTTATCCAATGTATAGATTGCCAGTTCTTTTACATTTGCATCAATGGA
GTGAATCCAAGACGAAATGGATGTACAGATGGTCTGGTTTTCAATAAGAA
ATCCCTTGCATGCGAAAGACCAGATAATGTTGAAGATGAATGCAAGACCT
GGTATAATGAAACCTTCTTGGAAGGTTTGAAACAAAAAAGTCACCAGAAT
CTAAGACCCATCACATCGCTAAAAACTCGTAAAAGAGTCAAAGTGATTCG
TAAAAATCCAAACGCAATTCTATCAGCAGGAGAAAGACCTGGAGCTCAAC
CCCCATCTTTCCAAGATCCCCGTGTTGGAACTGGAGGAGCCTTTCCCATA
TCTCCTCAAGCAGAGCCTATTGAAAATCGTCCTGTCGGAAGTCGTTCTCG
AGTTCGTCAACGTAGACCTGCTGCTCGCCCAGTTCTCAAGGCTCAAGAGT
TTGAAGAGGAAGTACCTGAAGGACCTCCCGCATTTGCTTTAAATGATCAA
GACTCTATTCAACAGTTTCGTCGAAACCATGGATTCAACAATGGGGGTGG
AAACTCCAGACTAACAATCCTTCAGACTCCTACCAATCCATTAGCCCCAG
TTGAGTCAGTTACTCCAATTGAAGAGGAGGATCCCTCTCCACCAGTTCCT
TCTCGTCGACAAAGACCTCCTCACAGACGACGTCCCATAAGCCAACAAAG
AACTTCTTCCCCTGCTTCAAGAGGAGGTGAAGGAGACAATGGTGGAAGAA
GACAAGAGTTTGATTCTTTCCAAGCTCGATTTTAATTAGCATGTATTAAA
TTATTATTGTGATTCGTTCATTTATATTCTTTTAGTTTTTGATTCATACG
TGTGTTGATGTATCACTTCACATGATTAATTAAAGATATCAAATGTGTTT
AAAGCCGTTCTTTTTAAGACATTTTTGCCAACTACCATGAGACTCTCTTG
TTCTTCATAACATAATTTGGTATTGTATCTTCAAAGTTTTTT
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