EMLSAT00000008456, EMLSAT00000008456-704303 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008456
Unique NameEMLSAT00000008456-704303
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s519supercontigLSalAtl2s519:261611..264299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008456 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008456EMLSAG00000008456-691222Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037541EMLSAE00000037541-746469Lepeophtheirus salmonisexon
EMLSAE00000037542EMLSAE00000037542-746470Lepeophtheirus salmonisexon
EMLSAE00000037543EMLSAE00000037543-746471Lepeophtheirus salmonisexon
EMLSAE00000037544EMLSAE00000037544-746472Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775491auto775491Lepeophtheirus salmonispolypeptide
EMLSAP00000008456EMLSAP00000008456Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008456

>EMLSAP00000008456 ID=EMLSAP00000008456|Name=EMLSAP00000008456|organism=Lepeophtheirus salmonis|type=polypeptide|length=433bp
MIVDWLKCGIFDVLLLGVETLVNIWLAINLKDAGFLSQFQGILILTVLPN
LLNTGIWFFSLRKNNGSDFIPVLLLTLLGWPCPLFVYQLSLSFPNQVKIH
GLAFLIGFLNVLRSASLFNERKTFPLLFVTAGFPFILFTTLTRILIAGLI
VTFLRIEWICLTAISLLFFNLILYIGTQKRTLSMNTLDNDLDSSSYIIDD
HEESSKKISSNRRNNALIASECLRYLPKYLLLSVCSIFIPSAYSNDRKSK
HPQIKGGTFILLNYFVNGTIFALTLGVTIFHFTPDDINGLSLPQPSLNVK
IPQGKLFVKAMGLDIGISLPDQNLDLGSMPPVTANVNTSENDGLISIIIP
AVLLLLPLPFVVIRALMMELDCFVLRRKDFEKFAPELAQNSTTKEALHTN
REIYLLNQKKKRRQEADVLSEIARKRLHDRSVL
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mRNA from alignment at LSalAtl2s519:261611..264299-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008456-704303 ID=EMLSAT00000008456-704303|Name=EMLSAT00000008456|organism=Lepeophtheirus salmonis|type=mRNA|length=2689bp|location=Sequence derived from alignment at LSalAtl2s519:261611..264299- (Lepeophtheirus salmonis)
AACGAGGTAGAATGATAGTAGATTGGCTCAAATGTGGAATCTTTGACGTA
CTCCTTTTAGGAGTAGAAACCCTTGTGAACATTTGGTTGGCTATAAACTT
AAAAGATGCTGGGTTTCTCTCTCAATTCCAAGGTATTCTTATATTGACCG
TTCTTCCCAATCTCCTCAACACCGGGATTTGGTTTTTTAGTCTACGAAAA
AACAATGGTTCGGATTTTATTCCTGTTCTGCTCCTAACATTGCTTGGATG
GCCGTGCCCTTTATTTGTGTAAGTACATAATATAAGATGCATCAGTGAAG
TGAAGAAATTTTGTTCAATAATCGTATTATCTATACAATTGTCAGTTAGA
TTAAATTTGTATTTATGTAAATGTATTTTCAAAAGAAGTGTTGTATATGG
GTCAATGATGCCGAAGTACATCATATATAATTGAATACATAAATTTACAA
ATTTTTATTAACAATATACATTAGCTATCAGTTATCACTCTCCTTTCCTA
ATCAAGGTTAAGGTCTGATGATTCTTTGTACTTATTTGAATAATAATATG
TTATTCATTTTTTGTACATCTGTATTTACTGTTATTTATCTAAAAACAGA
TGTACATATTTATTTATTATTGTAGTAGCAGTAGTTCACATTGGGTGTAT
ATTGATGTATGAAGGGTTGACAAAGGATTTAATGCATGTCATATTTGCAG
GTACATATGGTCCATTTATCTAAATGTCTTTGGACACAAGAGACGAAAGG
ATGCTCGAATCACTGCCAACATATTTCGAATCATACAGACNNNTCTCTTT
CTCAATCCCTGTCTTGATAATCAATATCATGACACTCATAGGATCATTGW
AATCTGAAAATGCTCATGGAAACATAACGCTTAATTTGAATTCCCTCTCC
GCTCATATCTACGAAGGTAGGATAATGGAATATTACAAGGATCTCAAATA
GGCCCTAAAAAGTATATACATAAATATGGGGTTTTAATTTATTTGTTTTT
TAAAAATAAGGAGAGATTTATATGGTTACACACGAACCTTTAACCTTATC
AAGATCTATTAGCTATACATATATGGACATGTTCCACTAATGAATCTTCT
GTCATATATCATTTATACCTTGGTTGACATAATCTTATTCTTTCATCATA
ATCAAAACATGCAAAATTCAACCTCCTGCGTAGAAACAAATATGATTTAT
GCTGTGTTTATGAATGTGTACAGTAAATGTATGCTAACTTATTGAAACGC
CTAAATGTTATTTGTTTCTAAATTTGTGATAAACTTTTCGCTTTTCAGGG
AATAGACAAGTAGATTATATTTGAAGGCTATATCCATATTTTGCCTATTA
ATAGTTTATTAGTTAATACATATTTATGTAAATATAACACCCCATTATTT
GTAATTCTTCATGAGAAAAACATCATGTCTATTTGGTTTATTTTTTGAAG
TGAAATATTATCCAAATATGTTTCATTTTATGAAACATATTTGGATGATA
TTTTGTCTTGTCTTTTATCTTATGTCTTGTAAAATTAACTAAATGCAGAT
GTATTTATTTGTGTATGGAAATGATAAATCTCGTGTTTTGTTCCTTACAG
TTAAAATTCATGGTTTAGCTTTTCTTATTGGATTTTTGAATGTTCTGCGA
TCTGCAAGCCTGTTCAATGAGCGTAAAACATTTCCACTTCTCTTTGTCAC
TGCTGGGTTTCCCTTCATTCTTTTTACAACCCTTACTCGAATCCTCATCG
CAGGATTAATTGTTACTTTTCTTCGAATCGAATGGATTTGTCTTACAGCT
ATTTCTCTCTTATTTTTCAATTTAATACTCTATATTGGAACTCAGAAACG
TACTCTTAGTATGAACACTCTGGATAATGATTTGGATAGCTCGTCCTACA
TAATTGATGATCATGAAGAGTCCTCTAAAAAAATATCTTCGAATAGAAGG
AACAATGCTCTCATTGCCTCTGAATGTCTAAGATATCTTCCTAAATATCT
GTTATTGTCAGTCTGCTCAATTTTTATACCCAGTGCATATTCAAATGATC
GTAAGTCTAAACATCCTCAAATTAAAGGTGGAACTTTTATTTTACTCAAT
TACTTTGTGAATGGGACTATATTTGCTTTAACTCTGGGCGTGACCATTTT
TCATTTCACACCCGATGATATCAACGGACTTTCTCTTCCTCAACCATCTT
TGAATGTTAAGGTATGTTATGATGATATTAAAAATCAATCCTATTAATTA
TTGCCTTTATTTACAAATTTCATTTCCTGTATAATTATAGATACCACAAG
GTAAACTGTTTGTTAAAGCAATGGGTTTGGATATTGGGATCAGTCTTCCG
GATCAAAATTTAGATCTGGGTTCAATGCCTCCCGTTACAGCTAACGTAAA
CACCTCAGAAAATGATGGATTGATATCAATAATTATCCCTGCTGTTCTTC
TTTTACTTCCTCTTCCGTTTGTGGTCATTCGAGCTCTTATGATGGAATTA
GACTGTTTTGTATTAAGGAGAAAAGATTTTGAAAAGTTTGCCCCTGAATT
AGCTCAGAATAGTACCACAAAGGAAGCTCTTCATACAAATAGAGAAATCT
ATCTTTTAAATCAGAAGAAAAAGCGACGACAAGAGGCAGATGTTCTTTCG
GAAATAGCACGAAAGAGACTTCACGATCGATCCGTTCTA
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