EMLSAT00000008457, EMLSAT00000008457-704304 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000008457
Unique Name	EMLSAT00000008457-704304
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s519	supercontig	LSalAtl2s519:272141..277801 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000008457 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000008457	EMLSAG00000008457-691223	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000037545	EMLSAE00000037545-746473	Lepeophtheirus salmonis	exon
EMLSAE00000037546	EMLSAE00000037546-746474	Lepeophtheirus salmonis	exon
EMLSAE00000037547	EMLSAE00000037547-746475	Lepeophtheirus salmonis	exon
EMLSAE00000037548	EMLSAE00000037548-746476	Lepeophtheirus salmonis	exon
EMLSAE00000037549	EMLSAE00000037549-746477	Lepeophtheirus salmonis	exon
EMLSAE00000037550	EMLSAE00000037550-746478	Lepeophtheirus salmonis	exon
EMLSAE00000037551	EMLSAE00000037551-746479	Lepeophtheirus salmonis	exon
EMLSAE00000037552	EMLSAE00000037552-746480	Lepeophtheirus salmonis	exon
EMLSAE00000037553	EMLSAE00000037553-746481	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775645	auto775645	Lepeophtheirus salmonis	polypeptide
EMLSAP00000008457	EMLSAP00000008457	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s519:272141..277801-

protein sequence of EMLSAP00000008457

>EMLSAP00000008457 ID=EMLSAP00000008457|Name=EMLSAP00000008457|organism=Lepeophtheirus salmonis|type=polypeptide|length=989bp
VSRSRSRGRDRSGGESSPKRNRRGGSGSSRSPSPIKKNVDSESEDRKKMK
QEGKAGSEHRDENNANSDHKDGDSKRRSRSRSRHRRRSNSSDKDRPRTRS
KTGSPADRKTRSRTGSPRSRSSSRDRRRRDRSFSPVRRRSSDRRNSYGRN
RSPIDEDGYRIHVADLDVSATKRDMEKVFGKFGPLKEIWMARSVPCFAFV
VFRYREDAEDGXRSADGVEISGRRIRVTHARPRTKGRGRRGFNPNMRCYQ
CGDRGHFSRDCPDTKYGYKRPPSPRYSSRRDSDRHYDRGGGYDRFDHRRI
FSTFSLAWKRRVGQVVIVVVDALRADFVFNKTXLESMGLSNDDFMLKXAD
SDKRLFDIKSYSTFTSLGLVARVSCPTVTLPRIKAISTGSIPGYVDVVIN
FDSAALMEDSLIKRWRDASRNIVYYGDDTWIKLFPDSFLRNEGTSSFFVS
DFHQVDDNVTRNLPHEFEKSDWDVMILHYLGLDHIGHVFGPTSSLIPSKL
TEMEDVIEKLIVDLEKKGWEDDFPPLILVLGDHGMAXIGGHGGXTIPETI
TPVIALSPIFNASQSLKVIQLFFVFVKGSSKVIQQTDLAVTLSWLTGVSI
PKNSMGSNHEIFFNGVKSQNQSMREVLAYVEFVQTVLFDNVLEYNYVYMI
LGCGSIFTTVVILLVKSLTYEIFIRSKVILMFHLLRLLSLASTSFIEEEH
QVSYFLTMTLFMTMDPSFELLVVMLAYRGARTLNQTGDKWAHLPDVSDWL
NNHGYIRSSLFLFSIMGLWVLRARQEGIILIDKLSSIVLMAIIYKKTSRT
NDGHAIFEVLMDSFIPLICVLNRAENVCLIFLSVYAESVIWSKIKDNTNG
FKSALLYYMFGLCAFFHQGNSTSSLSKVDVNRGYIGISSFNSITVGSLLM
ISTYSGPLLWLLLLYKRLDKTHHKYSLDASILLLGVEAVFFMIIITAQRF
HLFIWTVFSPKLLYLSVNYFLFTVMHSFLSLCIYGFNSL

mRNA from alignment at LSalAtl2s519:272141..277801-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000008457-704304 ID=EMLSAT00000008457-704304|Name=EMLSAT00000008457|organism=Lepeophtheirus salmonis|type=mRNA|length=5661bp|location=Sequence derived from alignment at LSalAtl2s519:272141..277801- (Lepeophtheirus salmonis)
GTTAGTCGAAGCAGAAGTCGGGGACGTGACAGGAGCGGTGGAGAAAGTTC
TCCTAAAAGAAACCGGCGGGGTGGATCTGGGTCCTCTAGAAGCCCTTCTC
CAATTAAAAAGAATGTTGATAGTGAATCTGAGGATAGGAAAAAAATGAAA
CAAGAAGGTAAGGCAGGGTCCGAACATCGAGATGAGAATAATGCCAATTC
TGATCACAAAGATGGCGACTCTAAGAGACGATCTCGGTCACGATCTCGTC
ATCGTCGTCGCTCAAACTCGAGTGACAAAGATCGTCCAAGAACTCGCTCG
AAAACAGGTTCMCCCGCCGATCGTAAAACACGCTCAAGAACTGGATCTCC
AAGGAGTCGATCAAGTTCTAGAGACCGTCGTAGAAGAGACAGAAGCTTTT
CTCCAGTGAGAAGGAGAAGTTCTGACAGAAGAAATTCCTATGGCAGAAAT
AGAAGTCCCATTGATGAAGATGGTTACCGTATCCATGTAGCAGATTTGGA
TGTATCCGCAACAAAGAGGGATATGGAAAAAGTTTTTGGCAAGTTTGGTC
CACTGAAGGAAATTTGGATGGCCAGATCTGTTCCATGCTTTGCTTTTGTT
GTATTTAGATACAGAGAGGATGCGGAAGATGGAGKAAGATCTGCTGATGG
TGTGGAAATTTCTGGTAGACGGATTCGTGTTACACATGCTCGCCCACGTA
CCAAAGGCAGAGGACGAAGAGGATTCAATCCAAATATGCGATGCTATCAG
TGCGGTGATAGGGGTCATTTTTCGAGAGATTGCCCTGACACCAAATATGG
ATATAAAAGGCCTCCGAGTCCAAGATATAGTAGTAGAAGAGATTCTGATC
GTCATTATGATAGAGGCGGAGGCTATGACCGATTCGATCATAGAAGAAGT
CGTTATTAATTTTTTTTATCTTTGCCCCTCTATTATTAGATATATTTTTA
AGATATTTCTAACCCCGTTTTTCGTTACTTTCGCAGCAATCAATTGCTTT
TTGTTTCATACTTTTAATAAATTACAAATTTTGTTCGGTTGCTGCCGAAC
ACTCCTCTTATTTCAGTACTGTAAAAATTTTCAACGAATAAAATATTATG
TAAACAGTAGATTTAAATACCGAACTGGAAAGATTTTATATATTTATTGG
CTTTGAAGAAAAATGATTAATTTTGCTATCGGCTTATTTTCTTCTACATT
ACAGTTTGTGTTAATGGTCCCCCAATTTATGGTTATTGTAATTATGAATA
ATATTTGGAGTGTTAAATGGCTTTTTAATGATTGATGGTGTTCCAAAAAA
AATGTTATTATTTTGGGTGTAAGACAGAAAAGTAATTATTTGTGTGTTGG
CCCCCTTTCTACGTTATTCACCAATATGGTATTTTGGTGACAATCTGGTT
GTTATTGGTGTTGAGTTGATATTATTAGAGGTGAAATGATAGATGGAATT
GGTGACAAATAAATGTCGACTTTGTCGTCTTCTTCTTTATGGTCTTCGGA
CATAAGTTATTTTTGTTTTACTAATTGTTTAATCTTTGGATGAAAATGAT
TTTAAAGCTGGTCATGTTTTGGATCCAGATACTTGGGTTTTTGTGGTTTT
TACTGGGATTCTTTCCATTGAAGACTCCTCTTAAGGGAGACGCTCCCTCA
ATAAGGGAGGAAGAAGAAGAATTCCCATCCCTCAGGTACGTTCCCATAAC
TTCGGGCTAAACCATTACATACTCATTTCTCCATCAACTACTAGTTACAT
ATATCCCTTATTAATATACGTGCTCTTTTATAAACATTACATACATATCT
TTTTCCTCCTTCTGATAACTTGCTCAGTCTTTCTTATTAACTCTAATGAT
AGCGATGATGATATTAAAATTTTTGTACATGTTGCCATGTGACGATAGCT
ATTTCGTCAAACATGGCCGTGTTCCCAGTTTTTTGTGCATGATGTAACCA
TCTTGTGCATTGATCCTTTTACATACTGTCGTCATCCAGCCTGAGGTAAG
TTGCATGGCTCTCTACTTTTATAATATAACAAGTTCCAATCAGGTGGTAT
GAAATGGTTAAAACTTATTTGGTGATGGAAGATGCTTATAACATACAGAT
ACATTTTCGAAAGAACTTCCCTTTTTTGAGATGAATTGGTCTCATTCTCA
CTTTGTTTGTGAAAGAACGGAAAGTTGTCAGCTATTGGCATATATGATTG
CTTGGGGGTTTCGAGGAATTTATAGAGTATCAAACGTTCTATAAATGGTT
AAAACCAATTTTCCCCCATATATGTATGGATAAGATATTAACCAATACTT
CTTTTACTGAAATATACATACTCTTATCGATTGATACAAATATTGAACAA
CCAATTATTTCCATTTGCGTTCAATACTTAATTTTAAAGCGCAGTCCTAG
TTTTTCTATCCTCTTTTAACAAGTGTATATATATCCAATGCCCCTAAAAT
GTTCTTCTTTGTTGTGGATAAATAAAGTATGAATTGATTCGAAGTATTCA
AATACAAAATAAATGATTCTAGCTCACCATAGAATGAGGATAATGCACAT
TGAAAACATGGGGGAAATGTATAACAGATACACAAAATATAATATTCAAG
ATCTATCTCATTTTAAGTCAATTGAGAAAATCCCTTGTTACTAGAACAAT
ATTAAGACATTAGTATTTTTTTAAGGAAATATACATCTTAATAGAGTATA
GAACAAAATCAATTTATAATCTAACTGAATTATAAAAAATAAAAATCTTG
TTCAACATTGATAAAACTAAATATTTTTTAAATTTCATGCTTCGTTGTCT
TCACTTATTTATTTATTAATCTTATGCCCGCACACGTATTTATGTAAGGA
ATTATATGGATATTGTGTATAGTTATTTATCTGAGTGTAGTCTTTTCAAC
TTTCAGTTTGGCTTGGAAAAGGAGAGTAGGACAAGTGGTCATTGTTGTTG
TTGATGCCTTGAGGGCGGATTTCGTTTTTAATAAAACTMCCCTTGAAAGT
ATGGGCCTTTCAAACGATGATTTTATGCTTAAASGAGCCGATTCCGATAA
ACGTTTATTTGATATAAAGAGTTATTCAACATTTACTTCCCTTGGGCTCG
TTGCTCGGGTCTCGTGTCCAACCGTCACATTGCCACGAATCAAGGTCCTT
CCAATCAATATACGGATCTTTGGTTAACATGTTCTTTTTTCTAGGCTATT
TCCACCGGTAGTATCCCTGGATATGTCGACGTTGTTATTAATTTTGATTC
TGCAGCATTAATGGAAGATTCTCTTATCAAGAGATGGAGGGACGCGTCTA
GAAATATTGTGTATTATGGAGATGATACATGGATTAAGCTCTTCCCGGAT
AGCTTTTTACGAAATGAAGGAACCTCCTCTTTTTTTGTATCAGATTTCCA
TCAGGTCGATGACAATGTTACCCGAAATTTACCCCATGAATTTGAGAAAT
CAGATTGGGATGTAATGATCCTTCATTACTTAGGTCTTGATCACATTGGA
CATGTATTCGGTCCTACTAGCTCTTTAATTCCTTCAAAACTTACTGAAAT
GGAAGATGTAATTGAAAAGCTGATAGTCGACTTAGAAAAAAAAGTATGAT
AACACGAAGGCAATAGTATTAAATAAAAAGTCAATTCAATCTTTAAACAC
ATAAGGGTTGGGAAGATGATTTTCCACCTTTGATCCTGGTTCTTGGAGAT
CATGGAATGGCTGRTATTGGTGGGCATGGTGGGKCTACAATTCCAGAAAC
TATTACTCCAGTCATTGCGTTGAGTCCTATTTTCAATGCATCTCAGTCAT
TGGTAAATTATATTCACAACACTCCTTTATTTACTGAATATTGTCCTTGT
TTTCTTATTGTTGACAATTTCTCAGAAAGTTATACAACTTTTTTTTGTCT
TTGTGAAGGGAAGTTCCAAAGTTATTCAACAAACAGACTTGGCTGTCACC
TTGTCTTGGTTAACTGGTGTTTCGATCCCGAAAAATAGTATGGGTACCTT
AGTTGACGKAATTGTTTCATCTGTCGAGKTCAATCCTGTGTATCAAAAAC
TGTCAGCCCTGTATAATCTTAAGCAGATTTATCGGATAGTGGAACAAAAT
TCTTTAAANTGATCAGATTGGTAATGCCTTTAGTCGTCATAAAACAATGA
CATGTAAATATGATTAACGATTCCAGGCTCCAATCATGAAATCTTCTTTA
ATGGAGTGAAAAGTCAAAACCAATCTATGAGGGAAGTTCTTGCCTATGTG
GAGTTTGTACAAACTGTTTTATTTGATAATGTCCTGGAGTATAATTACGT
ATATATGATTTTAGGATGTGGATCTATTTTTACAACGGTATTAACGGCTC
ATTGACACTTAATTAAATTATAAATTCATAAAAATAAATTTTTCTCATTG
TCTTCAGGTCGTTATTTTACTTGTAAAAAGCTTAACCTACGAAATATTTA
TTAGAAGTAAAGTAATTTTGATGTTTCATCTCCTTCGCCTTCTTTCATTG
GCATCCACATCGTTTATCGAAGAAGAACATCAAGTATCATACTTTTTAAC
TATGACTTTATTCATGACGATGGATCCTTCGTTTGAGCTCTTGGTAGTTA
TGCTTGCGTATAGAGGGGCTCGAACACTCAATCAAACTGGTGACAAATGG
GCCCATCTACCAGATGTATCTGACTGGTTAAATAATCATGGTTATATTCG
ATCTTCTCTGTTCCTTTTTTCAATTATGGGTCTTTGGGTACTGAGAGCAA
GGCAAGAAGGGATTATTTTAATTGATAAATTGTCATCTATTGTTCTCATG
GTTTGTGTTGWAAGCKAAAAAATTGCTGACAKCTCTGTATTAKCTGACAT
AATRCCTARCAGCCATATCTTTTCGGAGAGGTACACTTCCATTTCTTATA
ATATGTCAATTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTATATG
AAGCTCAAATCGTGTATTTAGGTTGTGTTGTAATTGCTTGCGTAAAGGCA
ATAATTTATAAAAAAACATCAAGAACAAATGATGGGCATGCTATATTTGA
AGTCTTAATGGACTCTTTTATTCCGCTGATATGTGTTCTGAACCGAGCAG
AGAATGTATGCCTCATCTTTCTCTCTGTATATGCGGAATCCGTTATTTGG
TCCAAGATAAAAGATAATACAAATGGATTCAAATCAGCCCTTCTTTATTA
CATGTTTGGCCTCTGTGCGTTCTTTCATCAGGTTTGTCAAATATTTATTA
AATTAATATATAATTTGATGTCGTAATACGTTATTTTATTTTTAGGGTAA
TAGTACCTCCAGTCTTTCAAAGGTAGACGTCAATAGGGGGTATATCGGTA
TATCATCTTTCAACTCCATTACTGTCGGATCCTTGCTCATGATTTCCACA
TATAGTGGTCCACTATTATGGCTGYTATTATTGTACAAAAGATTGGACAA
GACTCATCATAAATACAGCTTGGATGCTTCCATACTTTTACTTGGAGTTG
AAGCCGTTTTTTTTATGATTATAATCACTGCACAACGTTTTCATTTATTT
ATTTGGACTGTATTCTCTCCTAAGTTGTTGTACTTAAGTGTTAACTATTT
TTTATTCACAGTAATGCATTCCTTTCTAAGTTTATGTATTTATGGCTTTA
ACTCTTTATAG

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