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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s51 | supercontig | LSalAtl2s51:1339596..1344887 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008460 >EMLSAP00000008460 ID=EMLSAP00000008460|Name=EMLSAP00000008460|organism=Lepeophtheirus salmonis|type=polypeptide|length=1303bp
MVGGGSTASSLLTIKELKIGRCERGIVVTRIPSASLPGTSSKKKKPDRKI
LAVRRETMLVVWHNKGHASRNRFEGSIDIRDIKEIRGASNKSRDFDRCTE
EAIQNVKPSRCFVILYGKEFNLKTFSCVTISEEECNDWIEGLSYLLEDVA
TASYKHEQERWFRKGFYQFEIPGKEGCLGLTELKKFLHKISYKIPNSVLK
EKFGKYDRSSTGEISFDDFCNILQELLLTRDLFKDVFGIYSSDGRRVTLQ
EFKKFLEKDHPSIDEDVGAQMRKFLQDTSRDVKDPYFTIYEFMDWLFSKN
NRIYLESEIVDQSMNRPLSHYWISSSHNTYLTGDQISSDSSVEAYARCLR
MGCRSVELDCWDGPEDAPIIYHGHTLTSKIKFHDVIKTIKENAFVTSEYP
VILSIEDHCTLTQQRKMASLFESVFGDMLVSAPLEKNETALPSPDKLKYR
IILKHKKLPEGADEVVITEDSIRRGDGGIDIASSVKNGILFLQEQESEEW
EPNFFVLTQNKMYYSEVHANRDDEEEDLESTIDEDSELNASLPSTSSQGY
NIDSSEQHFGETWFHSNMKNGRSTAEQLLKCNTSLGEGTFLVRPSETFVG
DYSLSFLRQGKVFHVPIKSRQNNGRLRYYLIDQNFFDSLYALISYYKKNP
VKSARFSITLNRACPPPNPHETKSWFKNNYTREQAECYLNHVNTDGAFIV
RVGERMHGTFAISFRAENKVKHCLIKPEGRFYSIGSLQFESLVKLVNYYL
KNPLYKKIRLKLAPNDETYSTNLSSPPIMSNGGDFDSGINNNDENAQGYF
DPSTLNSNFYVRARYDYQNKRDDELNLVKNCIVSNVKKCEGGWWLGDYGG
RKQHWFPANYVVEIDPPPSEDDSRNPNISSGGGPLSAVDSQAPLGNMQKG
VWDITAAKVDILDGLNVFNSEREPLWVLRIDCPSPNERKEYRVGTTSKDE
ALQWKLKIQETGQTASHREDENRKNERAMRVARELSNLVIYCRSVVFNLD
YYLRQKDRNPMEMSSFPETKAEKLMTSNSSMFLWYHRVQLSRVYPKAQRV
DSSNYNPLSMWNVGSQMTALNYQTGDKPMQINVGRFMQNGKCGYVLRPEF
MFSPSYVPGDPKSLKGVVEPFFLGVRILAARHLTRSKNKNSIISPNVEVE
VLGAEYDNFKNRTRSINDNGFNPVWDEFFDFTIQNPQLALIRFTVYDYDI
FGENNFIGQYTCPLIGIQTGYRSVPLKNAYSEPLELSALLVHITVENARG
QSYELHKLRESAHDLQRQSDLSHERGDDAVAETLHLESQRQELAVMKLMG
IGR back to topmRNA from alignment at LSalAtl2s51:1339596..1344887+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008460-704307 ID=EMLSAT00000008460-704307|Name=EMLSAT00000008460|organism=Lepeophtheirus salmonis|type=mRNA|length=5292bp|location=Sequence derived from alignment at LSalAtl2s51:1339596..1344887+ (Lepeophtheirus salmonis)
TGGGTACAAAGGCTGACTAGTATTTCATAATAGAATGAGCAATACATACA
AGATAAACAAAATTAACTCAAAAGTTAGGACTGGTGCTAATAAAACAATG
TTGGAAATGACGATATTATCTTTTAATTGTATATGAACGTACAATTTATA
TATCCTTTAGTACAAAATAAAAAGTGAGGGAAAGACGGGGCGAAGGAGAG
AGAGAGAGAGAGAAATGAAAATGGAAAGAGTAATAAGAAAGGGTGAATGA
ATGAGGAGTGTCACTCAACCTCTCATTCAAAGTTCCAGAAATGGTTGGGG
GAGGCTCGACGGCTTCGTCGCTTTTGACGATAAAAGAATTGAAGATTGGA
AGATGTGAGCGAGGGATAGTTGTGACTCGAATMCCCTCGGCCTCTCTTCC
AGGAACATCCAGTAAAAAAGTGAGTCAAATTCTTTATTGTTCATCACCTT
ATAGTTTATTATTATAAATATTAAGTAATAATTCGTAGAATTTTTTTTTA
AATTTTGAGTGCTTTGATTGTATTAAACTAATTACCATTTAAAATGATTT
TAGAAGAAACCAGATCGGAAAATTTTGGCTGTGAGGAGAGAAACAATGCT
CGTGGTTTGGCATAACAAAGGTCATGCCTCGCGTAATCGATTTGAAGGCT
CAATCGACATACGAGACATCAAAGGTAATTATAATTGACATCCGTGTCTT
AATTGTTGGTATCCCTCGAATCCTTGCCTTATTACTTTTTCAGAGATCCG
TGGGGCAAGTAACAAATCCCGTGACTTTGATCGTTGCACAGAAGAGGCCA
TTCAAAACGTGAAACCCTCTCGTTGTTTTGTCATCCTCTACGGCAAAGAA
TTTAATCTTAAAACTTTTAGTTGTGTAACCATATCCGAAGAAGAGTGTAA
TGATTGGATAGAAGGACTCAGTTACCTCCTTGAAGACGTTGCAACTGCCT
CTTATAAGCATGAACAGGAACGCTGGTTTCGAAAAGGTTTTTACCAATTT
GAAATCCCTGGGAAGGAAGGTTGCCTGGGACTGACTGAGCTCAAGAAATT
CTTGCATAAAATATCCTATAAGATCCCTAACTCTGTTCTCAAAGAAAAAT
TTGGGAAATATGATCGTTCCTCCACTGGAGAGATATCATTTGACGATTTC
TGTAATATATTACAAGAGTTATTGCTCACACGTGATTTATTCAAAGATGT
TTTTGGTATATATAGCTCTGACGGTCGTCGAGTGACCTTGCAAGAGTTTA
AAAAGTTTTTAGAAAAAGACCATCCTTCCATCGATGAGGATGTTGGGGCT
CAGATGCGGAAATTTCTTCAAGATACTTCTCGTGATGTAAAGGATCCTTA
TTTTACTATTTATGAGTTTATGGATTGGTTGTTCTCTAAAAATAATCGCA
TTTACCTCGAGTCTGAGATAGTAGACCAATCCATGAATCGCCCTCTCTCT
CATTATTGGATTTCCTCATCGCATAACACATATTTAACTGGCGATCAAAT
TTCAAGTGATAGCTCTGTCGAGGCATATGCTCGTTGTCTAAGAATGGGAT
GTCGTAGCGTTGAATTGGATTGTTGGGATGGGCCTGAGGATGCCCCCATC
ATCTACCATGGACATACACTCACTTCCAAAATCAAATTTCATGATGTGAT
AAAAACAATTAAGGAAAATGCATTTGTAACCTCGGAATATCCAGTCATCC
TCTCCATAGAAGATCATTGTACTTTAACTCAACAGCGCAAAATGGCATCT
CTCTTTGAATCAGTTTTTGGAGATATGCTTGTGTCAGCACCATTAGAAAA
AAATGAAACCGCTCTACCCTCGCCAGACAAGCTCAAATATCGTATAATTC
TCAAACACAAAAAGTTGCCTGAAGGTGCTGATGAAGTTGTTATCACTGAG
GACTCTATTAGGAGAGGAGATGGAGGAATTGACATTGCTAGCTCCGTCAA
AAATGGTATACTATTTCTTCAGGAACAAGAGAGTGAAGAGTGGGAACCCA
ATTTTTTCGTACTAACTCAAAATAAAATGTATTATTCGGAAGTTCATGCA
AATCGTGATGATGAAGAGGAAGATTTAGAGAGCACCATTGATGAGGATAG
TGAATTGAATGCAAGCCTACCCTCCACTTCTTCTCAAGGATATAATATTG
ACTCTTCGGAGCAACATTTCGGTGAAACATGGTTTCATTCTAATATGAAG
AATGGGCGTAGCACTGCGGAACAGTTACTCAAATGCAACACCTCTCTCGG
CGAAGGGACTTTTCTTGTTAGACCCAGTGAAACATTTGTTGGCGATTATA
GTCTTTCATTCTTGAGACAAGGAAAAGTAAGTTATAAAGAATTGCTTAGC
AGATTAAATAATAGGATCATACATAATATATACAATTCTTAGGTTTTTCA
TGTACCTATCAAAAGTCGACAAAACAATGGAAGATTACGCTACTATTTAA
TTGATCAAAATTTCTTTGATTCTTTATATGCATTAATAAGTTATTATAAG
AAAAACCCTGTAAAATCTGCGAGATTTTCCATAACTTTAAACAGGGCCTG
CCCTCCTCCTAATCCACATGAAACCAAGGTGAGTTATTTCCCAAGAAATT
TGTTTTAGGATTTATTTAATTAATAAATCATGTTTTGACTTTGATAGTCT
TGGTTTAAAAATAACTACACAAGGGAACAAGCTGAATGCTATTTAAACCA
TGTCAACACTGATGGGGCCTTTATTGTACGGGTTGGTGAGAGGATGCACG
GAACTTTTGCTATATCTTTTAGAGCTGAAAACAAAGTTAAACACTGTCTT
ATTAAACCAGAAGGAAGGTTTTATAGTATTGGGAGTCTTCAATTCGAATC
TCTTGTCAAACTTGTCAATTATTACCTTAAAAATCCTCTTTATAAGAAGG
TAGGTTTGATGCTTCCTCCATCTTCTGGATTCTTATTTGTTTCCTTTTAA
TTAAATATTGATGTTTTAACTTCAGATTCGGCTAAAGTTGGCACCGAATG
ACGAAACCTATAGTACAAATTTATCTTCGCCACCAATTATGAGTAATGGT
GGCGATTTTGATTCAGGGATTAACAACAATGATGAAAATGCACAAGGATA
TTTTGATCCATCAACTCTCAATTCGAACTTTTATGTCCGTGCTCGCTATG
ATTATCAGAATAAACGTGATGATGAACTTAATCTGGTTAAGAATTGTATC
GTGTCTAATGTTAAAAAATGTGAGGGGGGATGGTGGCTGGGAGACTACGG
TGGKCGCAAACAACATTGGTTCCCTGCTAATTATGTCGTTGAAATTGATC
CTCCTCCCTCCGAAGATGACTCTAGGAATCCCAATATCAGTAGTGGGGGT
GGTCCACTCTCTGCCGTTGACAGTCAGGCTCCCCTTGGAAATATGCAAAA
AGGAGTATGGGATATAACTGCTGCTAAAGTTGATATTCTTGATGGGCTTA
ATGTGTTTAATTCAGAAAGAGAACCTTTATGGGTGCTCAGAATCGATTGT
CCTTCACCTAACGAACGTAAAGAGGTACGTACCTCTTGTTATTAATCAAT
TGAAATTTTTTATATTTAAGTTATTTAATTTGATTATTTAAAGTATCGAG
TTGGAACAACGTCCAAGGACGAGGCACTCCAGTGGAAACTGAAAATCCAA
GAAACTGGACAAACAGCTTCTCATCGAGAGGATGAAAATCGTAAAAATGA
AAGGGCAATGCGTGTTGCAAGAGAATTGAGCAATTTAGTAATTTATTGCC
GTTCTGTTGTTTTCAATTTGGATTATTATCTTCGTCAAAAAGATCGTAAT
CCGATGGAAATGTCATCATTTCCCGAAACAAAAGCAGAAAAACTAATGAC
TTCAAATAGTTCTATGTTCCTTTGGTACCATAGAGTTCAGCTCAGTCGAG
TGTATCCTAAGGCTCAACGAGTTGATTCATCAAACTATAATCCTTTATCC
ATGTGGAACGTTGGATCTCAAATGACGGCCTTAAATTATCAGACGGGCGA
TAAACCCATGCAAATTAATGTGGGTCGTTTTATGCAAAATGGAAAATGCG
GCTATGTTCTTCGTCCCGAGTTCATGTTTAGTCCCAGTTATGTTCCAGGA
GATCCAAAAAGTCTTAAGGGGGTTGTGGAACCTTTTTTTCTTGGAGTTCG
TATTCTTGCTGCTCGACACTTAACTAGAAGTAAGAATAAAAACAGCATTA
TCTCTCCAAATGTTGAAGTTGAAGTTTTGGGGGCTGAGTATGACAACTTT
AAAAATAGGACTAGGTCTATTAACGACAATGGATTCAATCCTGTATGGGA
TGAATTCTTTGATTTTACAATTCAGAATCCTCAATTGGCTCTTATTAGGT
ATTTCTTCTTATTAATTAAAATCCTCGATATTTAAATTGCCTATTAATTA
TAACTAACAATTCCCCTGTTATGCAGATTTACCGTTTATGATTATGATAT
TTTTGGGGAAAATAATTTTATTGGCCAATATACGTGCCCATTGATTGGAA
TTCAAACTGGTTATCGGTCAGTTCCTCTTAAAAATGCCTATAGCGAACCC
TTAGAATTGTCAGGTATGCTTGATTAATTAAATATACGCTATTATGTAGT
TAATTATATCAAATTCATTTTCCAGCTTTACTAGTTCACATCACAGTTGA
AAATGCTCGTGGACAAAGTTATGAACTCCACAAGTTGAGAGAATCGGCGC
ATGATCTTCAACGGCAGTCAGATTTGAGCCATGAGAGAGGGGATGATGCA
GTGGCTGAGACCTTGCATTTGGAGTCCCAACGTCAAGAATTAGCCGTGAT
GAAATTGATGGGAATTGGTAGATGATACGTAAGCGATATAATTGTGCTGA
TAAATTGCATTTAAGTTATAGTATCTAGCATTTCTTTTCAATCCATTAAA
TTCTATAAGATTGATCAATGATTCAAGATATCATCATAATTTTGTCTTTC
TTTTCAGAGAAAATCCTCGCATTTTAAGTAGTAAAAGTGCGATAATTTTG
ATTACAATTTCTTCAGAATCCTTTCCTCCCATTATAACTCATGATGGATA
ACAAGAAGGCAAACAAATAAGTTTGGACTCACTTTTTTATATACATGCAT
ACGTATATATCAATATGTACTGGGATTGCTTTGAAGAATAATGTTTCCTT
TGAMCATCCACATCCTCCATGAATATACTCTTCTCAGTACTCTACCTATA
ATATTATGTACTACCTTTTCTCTCTCAATCAAATACTTAATTAGTTATAC
TTAATGATTAATTAGTGATTAGTGATATTATTTACACATATA back to top
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