EMLSAT00000008523, EMLSAT00000008523-704370 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008523
Unique NameEMLSAT00000008523-704370
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s525supercontigLSalAtl2s525:13855..15124 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008523 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008523EMLSAG00000008523-691289Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037852EMLSAE00000037852-746780Lepeophtheirus salmonisexon
EMLSAE00000037853EMLSAE00000037853-746781Lepeophtheirus salmonisexon
EMLSAE00000037854EMLSAE00000037854-746782Lepeophtheirus salmonisexon
EMLSAE00000037855EMLSAE00000037855-746783Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769109auto769109Lepeophtheirus salmonispolypeptide
EMLSAP00000008523EMLSAP00000008523Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008523

>EMLSAP00000008523 ID=EMLSAP00000008523|Name=EMLSAP00000008523|organism=Lepeophtheirus salmonis|type=polypeptide|length=185bp
MGLLRIMKKQKEKEKELRFLILGLDNAGKTTILKRFNGENIDSISPTLGF
KIQTLEFMGFNINFWDIGGQKSIRAFWRNYFQVTDALLWVVDASDVRRLE
DCRSELHLVIREERLLGCTLLIFANKSDLPNSLSAEKIKEALDLEIITTH
HWMIMDCXAVTGHNLLPGMEWLVNDVSSRIFDLKD
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mRNA from alignment at LSalAtl2s525:13855..15124+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008523-704370 ID=EMLSAT00000008523-704370|Name=EMLSAT00000008523|organism=Lepeophtheirus salmonis|type=mRNA|length=1270bp|location=Sequence derived from alignment at LSalAtl2s525:13855..15124+ (Lepeophtheirus salmonis)
CGTCGCTTGGCTTTACTTTGTTCAGCAAAAGTTTGTTCTCCTTTTTTGAA
GAAGAGGTTGGGAGGATATCATTTCAAGTTTTCGCTGTCGCTGTCTCTAA
TTTCGAGATCAAAAGAGAGAATATGACGTRCGGACAGAATTGTCAACCAT
ATCTTTAGTGGGTGTGAATGGTTGAAATTAAACTCCTGACACGGTTACTC
ATTATTCATTTCTTTTGACATTATTAGGCGAAATTAAGGATCATCATGGG
ACTGCTACGAATAATGAAGAAGCAAAAAGAAAAGGAAAAGGAGCTTCGTT
TTTTGATATTGTAGAGTATATTTATAATTATATATAATCATCCTGTTCAT
TTTCTTTTATTCTCCCTCCTAGAGGATTAGACAATGCCGGAAAAACGACA
ATATTGAAGCGCTTTAATGGAGAAAATATTGATTCCATTTCTCCCACATT
GGGTTTCAAAATACAAACACTCGAGTTTATGGGTTTTAACATAAACTTTT
GGGACATTGGAGGCCAAAAGTCAATTCGCGCCTTTTGGAGAAATTATTTT
CAGGTTACTGATGCATTACTTTGGGTCGTGGATGCCTCTGACGTTCGGAG
GCTTGAGGACTGTCGCTCAGAATTACATTTAGTTATTCGTGAAGAGGTAT
TTTTTCAAGGCTTGTGAATTTTGATCATAACTTGTTTACTTTTGTTTGAT
AGCGACTCTTAGGCTGCACTCTCTTAATATTTGCCAACAAATCCGATCTT
CCAAATTCACTATCTGCAGAAAAAATTAAGGAAGCTTTAGATTTGGAAAT
TATAACTACACATCATTGGATGATAATGGATTGTTYAGCTGTCACAGGAC
ACAATTTACTACCAGGCATGGAGTGGCTTGTAAACGATGTCTCAAGTCGT
ATATTCGATCTTAAAGATTAAAAAATATATATTCGCTTAATTGGCCGCAC
AGTGTATTATTGGAAATATCCGCCCAATCCATGACCCGCACTTTATATCA
TATCTATTCATCTTAAAGAAGGAATTTGTGTTTGGTGGAGACCCATATTG
AAGAGAACTTCTGTTACTAAATCATTAATACATTCAGAATTATCTATAGT
AAACATCAAATTGTTCATTCTAACCATATTCCATTTGGTTCAAACCGCTA
TTTTAATGGGTAGTATAAATTTTATTTGTAAATTCTAAAGATCAATTTCT
TGTAAAAATTATTTATGTAACCAAATAACAATAAAGAAATAAAAAAATAC
TCTCCATGATTCATAATTAC
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