EMLSAT00000008534, EMLSAT00000008534-704381 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008534
Unique NameEMLSAT00000008534-704381
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s526supercontigLSalAtl2s526:121926..125807 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008534 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008534EMLSAG00000008534-691300Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037915EMLSAE00000037915-746843Lepeophtheirus salmonisexon
EMLSAE00000037916EMLSAE00000037916-746844Lepeophtheirus salmonisexon
EMLSAE00000037917EMLSAE00000037917-746845Lepeophtheirus salmonisexon
EMLSAE00000037918EMLSAE00000037918-746846Lepeophtheirus salmonisexon
EMLSAE00000037919EMLSAE00000037919-746847Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772730auto772730Lepeophtheirus salmonispolypeptide
EMLSAP00000008534EMLSAP00000008534Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008534

>EMLSAP00000008534 ID=EMLSAP00000008534|Name=EMLSAP00000008534|organism=Lepeophtheirus salmonis|type=polypeptide|length=193bp
MFLVDWFTGVLGYLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDRIAQHVP
TLHPTSEELSIDRIRFTTFDLGGHHQARRVWKDYFPAVDAIVFLIDGCXR
VRFEESKNELDSLLTDEQLANCPVLILGNKIDRPGAVSEDEMRQIFGLYG
QTTGKGKVLRSELHGRPLELFMCSVLKRQGYGEGFRWIAQYLD
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mRNA from alignment at LSalAtl2s526:121926..125807+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008534-704381 ID=EMLSAT00000008534-704381|Name=EMLSAT00000008534|organism=Lepeophtheirus salmonis|type=mRNA|length=3882bp|location=Sequence derived from alignment at LSalAtl2s526:121926..125807+ (Lepeophtheirus salmonis)
GTTTTTCCTCTCAGATATCCCTCCGCCCCCAAAACAAGCATACAAAATTT ACATATTATACTGCTTCATTGTATGAACAGTAACATTCAACATGTTAAGA AGAGAAGCCTTATATTTTTTGACGTTTGTTAACACAAAATGACTATTTGA CGTAGTCAAGTGAATTTAATTTAAAAAAAGAATGAATAGAATTAATTTCC TCCATATCCTCGCAGATTTCTACTCAAATCAGAGTATCAACGTGTACCAA TCGTCATTAAGTCTAGCTTATTAATAAAAGTAAACATTTTGAAATGTCAA ACGTAGTAGCTTTATCAATTATGTCATAATTAGAATATACAATTAACATT AACATAACATTATTATACAGGCATGTATTTGCGTAATTTTTTTAAAAGAG TGGTGTGACCGTTCACATTAAACTCACAAACTCTTTTTCTTTCTCTTTTA CATAAAAAAAAGTGATGACGTTTAATATTCATAATAATCACGGTTACCAT ATCACCAGTTATTTAAAGAGACAAAGCTTGATTCTGAACTCACAATTCAA GAATAAAAAAAAACATTTTGTCTTACTCTAAGCTAAGTATTATTAAAAAA AAGCTCTCAATAGTCTGAAATAAAGAGAGTTTTTGCAGAAATATGACGTT GAAATTTTATATAACAGCTGTAAAGAAGTTGGTGCTCTTGCAAAGTAAAA GAAAAAGAAAGAGAAAAAAAGGAAGAGGACGGGGAGCGGATCTTCCACTG AGTGACTTTTTAGAGTTTCTTTACACTTTTTACAACTCCCAAGTCCGTTT ACGGGATCTCTTCCGAATCTTATCAAAGGAACGGATTGGAATCTTGAATA TTAGTATTAAAAGGTATTTATGATTGTTTATTCCTCCAGGATTTAGAATG GGCTGAAAGTGTTCTCAGGGATTCTGTTTGATTCATTTTGAGTATGTCCG AATCCTTTTCGAGGGAGGCTTTCTGATTAATTCCGTCCGTATATATTGTG AGAACTTGTGAGTCATTATGACGTCTTTGTGAAAAAGCATAGATTTGAAT GATTGTGTTATTGTAATGGACAGATGACCTTAGTATGAGGAGTCAGTTTC TTTAATCGAAGTCGTGCAAACAGTTTTCAACCACATCCCGCCCAACTCGA CCAATTGTGGATAAATATATATATATCCTCCATCATAATTCTTTACTCTT TAAGTATGTTATGTCCCGTACATATTTTGTTGAATAGAAATGTATTTTTC TTCTTTAAAAACACTCAAGTCCCAGCCAAGGAATCAGGTAAAAATAGCTG GAAAATCATTTTTATAATGAAAAAAATTATGTGTTTTCTTATCAATACTT GAGGTATTACCAGCGTATTATCATSATTAATTATCTAATGATAACGCACG ATCAATTTCAACTGAAAGAAAATTTTAACCTTACTTATTTCACTGAACAA TATTCTGCCAATTTTGTATTTGTTGTCTTCACTTTTATGCTCTATGTTAG GTTTAATTTTGATACAATAACACAATAAACTGATTAAATAAAGCCCTCCA ATATATATATTTATATATATATAAGGGTTCAATTTATAGATCAAAACATA ATTGTCGATTTGCATAACCAAACGTATGCTAATGCTATAGACATTTTTCT TGCATATTTTCTATCTTGTATATTTACTCAATTATTAAGAGCCTTAATAG GGTTWTCTTCATATTTTTAGTGWTGTAATCCCCAGAATAATTTAAAAACT TGATAAATATTTGTTTTATMCTATASGAWYTTATTACATATACATGAATT CAATCAGAGTACTATTATATTTACCTCTATTGACTTCGTAATATAATTGA TATCCTTCATATTTTGCATGTAATATATATTTTTATAGAACCTGTTTCCA GTTTTTTTAGATTTTAAGANTAACTTGTTTTATTGTACGTACTTTAAAAA AAGTCTTATACTTGGGATTCTTTTACTCAAACATTGATAATTATTTCGAA ATTATTTTTTACTTACTGCTTACTAATTTTCCATTAAAATTTATACTAGT AAAACACCTAAAAACGATGTGATGAATACTTTCTATATAAATATTGATTT TAGAGAAATATTATCTTTTATAGATTATATAATTTTGAACCCTTTATCTC AAAACTGGCTGTATGAATGATTGCATTTTGTATTATAAATTTTTTTCTAC GGTATATGACATAATTAATAATATTTAATTTCTTATAATTTTTCAGGTAA CATTTTGCAAAAACTCGAACGGAATATTTTATAATCGACTTAGTTGCGTT CCTTTATGTGCTAGCAAATTCGATTTAAAAGATTTATTGTTCAAGACTAT TTTAAAGTTTAGTTTAAAAAAATGTTTTTGGTTGATTGGTTTACGGGCGT CCTTGGGTATTTAGGACTTTGGAAAAAGTCAGGAAAACTTTTGTTTTTGG GCCTGGATAATGCTGGGAAAACAACTTTATTGCACATGCTCAAGGATGAC AGAATTGCCCAGCATGTTCCCACTCTCCATCCGACGTCCGAAGAGCTATC TATTGACCGAATTCGTTTTACAACTTTTGACTTGGGCGGCCATCACCAAG CGAGAAGAGTAATTTTTATAATCATTTTCTTTGTTTTATTTCTTTAATCT CCAATGGAATTAGAAAAATTAAGGTCATTCTCCTTTTTTTTAAATATATA TATTGAAATTTCAGGTGTGGAAAGACTACTTCCCTGCTGTTGATGCCATC GTCTTTTTGATTGACGGCTGCGYTAGAGTTCGTTTTGAAGAATCAAAAAA TGAATTGGATTCATTACTTACAGACGAACAGTTGGCAAATTGTCCAGTTC TCATTTTGGGCAATAAAATTGACCGCCCTGGAGCTGTTTCCGAAGATGAA ATGAGGCAAATCTTCGGACTTTACGGTCAAACTACCGGGAAAGGAAAGGT TCTTAGGTCAGAACTTCATGGTCGTCCATTGGAATTATTCATGTGCTCTG TTCTTAAAAGACAAGGCTATGGAGAAGGATTTAGATGGATCGCTCAATAT CTTGACTGAACGAAAACAACTTTAAATACCTAAATAAAGAAATCAATTTC ACATCATGGTTTTCAGGATTTTTTAAATAAAAAAATAGTTTTCGAAATAG CAATGAGGCGGGTAAAAGTAGCAAAATCATCTCGCTTAGTCTTTTTCAAT TAAAAGTCAAGTTTATAATTATGTTAACTTATATAAGAATAGTATAATCA AGCATTTAATCTTACAATTTAAGACTATTTTTTGAATCAATCAACTCACA ATCTTAAGCAATATTTTTTGAGAAAATCACAAGTAGGCGTAATAAGTTGC ATTAAATCTTTTTTTTAAATCAAATATGGTGTTTTTTAAGTAAGTCGCTA TTGTTTTGTTTAATTGCGATATTGTTATAACTAAATACACATTCTTTTAC ACGTTGTATGATTCATAATTTTAACTTTTCTGCCTCATTGTTGTAGCGAA AACAATTTACCTAGTTGACCATCTATGTAAAGCTTCTGGATTAAATATAC TCAGGTCTATTTCCCCTATTTTTTCATTTTTTTTTAAATTTCGCCCTATT CTTTACATGAATAAAGGGTTGAAAATCTTCCATCAATTTAATAACATCTT CAAATAAATATGCCGAGTATTCTTTTTTTCTTGTTAATATCAAATTCAGA ACATTGTAACAACTTTGATCATAATTTTTTATCATGTAAAAGTAATTATT ATGATAGTTTCATGATTTTTCTTCAAATTATTTTTTAAAACCTGAAAAGA AAAACATAACTTCCAACAATAATATATTTCTTAATGAAGTCTACTTTTAT GAATTTACTACAACTTATGCTATATTGTTAAT
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