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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s527 | supercontig | LSalAtl2s527:259402..264875 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008556 >EMLSAP00000008556 ID=EMLSAP00000008556|Name=EMLSAP00000008556|organism=Lepeophtheirus salmonis|type=polypeptide|length=1487bp
MADSVPLMVSLLSGGVAGTAVDIALFPLDTIKTRLQSPRGFYASGGFSRI
YAGLGPAALGSAPNAALFFLAYNAVKSTEILQKRHEAFRHAIAASAGEVT
ACLXRXPVEIIKQRRQAFQNVEPSLSSTSIVKKILHSKGFLGLYRGYFTT
VSREVPFSIIQFPLWEYFKHKYALNFNAEASPGVSASFGAVSGGIAAGLT
TPLDVAKTRIMLSDDPSTKRTLVVLRDIFVVNGFRGLFAVAYLLFIYLYY
PQLLQHFKCTWIPVFEKHKMKEKRFKKIVKNFDPTYPKKPSLKNLTSPEW
SIPSANPATEFLGTAHVESFNFATGPGLEMMIQDLEPVEFLVNDQRLSID
IVDAEFRPPEAPEGALGIRCPLVYPGEARQRGTTYKACAIIKVRITLNGV
LQPWILERSLGYLPIMVKSKICNLSNMSPKELVEKGEHPSEWGGYFVIGG
HERLIRMLISTRKNXPIAMCRPSWKNRGKHFSEYGVLLECSKPDLTVTKN
VLHFVTTGSAKYMFSFGRQLFFRARXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXPCVAPLGKTEGNIFQRSAKYMFSFGRQLFFVPV
IMILKCLTERTDADIYAHLIAGTSEDDHYYRSCLKEMLTEPHAEGLFSPE
QIRLYIGKSFKDKLKDALPEWTEDEDICKYLIKYSICIHAKDNEDKFQTI
VFMIKKLFALVQNRCVVEGVDSVMMQEYIILKKAKSENNFEVNALSISNA
INKMSPIAQSFESFLSTGNIPNASSLGLMQNSGISIMAENINRMRYMSHF
RAIHRGSFFQEMRTTEVRALLPDAWGFICPVHTPDGSPCGLLNHFTLNTE
VITHAPDASKVPEVLYDLGVVSVDEGIQGGNGKSVTPSYSVFLNGILMGY
VNGTSQTKEIADKLRILKVRKERGVPRVMEIVLIPYDDDSKLQGQYPGLF
LFTGPARMMRPVINLXADDVEFIGTFEQVFLNICIQPEEAYPGVTTHREL
RPTTFLSNLASLIPLPDFNQSPRNMYQCQMGKQTMATPIHTWHSNSETKI
YRLQTPTSPFFRPVHYDYIKLDEFPMGTNAIVAVISYTGYDMEDAMIINK
SSFERGFCSGSIYKAQFIDLKEISAGRKSYRNTDTCDLYFERNPNRDLSK
HLDADGLPYPGVPLFNGDPLYCYRSRIDDSYVLKKYEGNELAFVDSVKIL
SNDLGTGELTRVSICYRIPRNASVGDKFASRAGQKGICSRKWITEDLPWT
ESGIHPDIIFNPHGFPSRMTIAMMVECMAGKSGAAHGIVHDATPFTFSED
RNNDAIDFFGKQLESAGYNYYGTETMYSGTDGVEMKAEIFFGVIHYQRLR
HMVSDKFQVRSQGAIDQVTRQPIKGRRRGGGVRFGEMERDALLSHGSMFL
LQDRLFHGSDKTRVQICTRCGSLLSPRVSVSKKNTALGGAAVPGKXTCVI
CKKTDQVSELDLPYIFLHLVAQLAGVNIKVRLETTHS back to topmRNA from alignment at LSalAtl2s527:259402..264875- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008556-704403 ID=EMLSAT00000008556-704403|Name=EMLSAT00000008556|organism=Lepeophtheirus salmonis|type=mRNA|length=5474bp|location=Sequence derived from alignment at LSalAtl2s527:259402..264875- (Lepeophtheirus salmonis)
ATGGCAGATTCAGTACCCCTCATGGTGTCCCTACTAAGTGGAGGAGTCGC
CGGAACCGCTGTGGACATTGCCTTGTTTCCTTTAGACACCATCAAAACCC
GCTTACAATCACCGAGAGGATTTTATGCGTCCGGGGGCTTCTCACGCATT
TATGCAGGCCTAGGGCCTGCAGCTTTGGGCTCTGCTCCAAATGCTGCACT
TTTTTTCTTGGCTTATAATGCAGTCAAATCCACTGAGATCCTCCAAAAAA
GGCATGAAGCCTTTAGACACGCTATTGCAGCATCTGCTGGAGAAGTGACG
GCATGCTTGGKTCGAGKTCCAGTGGAAATAATTAAACAACGACGACAAGC
CTTTCAAAATGTGGAGCCGAGTTTGAGCTCAACTAGCATTGTTAAAAAAA
TCCTTCAGTAATATATTATAATTATATTATTACCCATTCTTGCTCATTTT
TTTCTTTTTGATTTGTTGTAGTTCAAAGGGATTTTTAGGTCTTTATCGTG
GATATTTTACGACAGTATCTAGAGAGGTTCCTTTTTCAATTATACAATTT
CCTCTTTGGGAGTACTTTAAGCATAAATATGCATTAAATTTCAATGCAGA
AGCATCTCCAGGAGTGTCTGCCTCATTTGGAGCTGTATCTGGAGGTATTG
CAGCAGGTTTAACAACACCATTAGACGTTGCAAAAACTCGCATTATGCTC
TCAGACGATCCTTCAACCAAGAGAACCTTAGTTGTTCTTAGAGACATATT
TGTTGTGAATGGTTTTAGAGGACTCTTTGCAGGTATTGTTCCTCGTACAA
TGTGGATGTCTATTGGAGGATTTATATTTTTTGGAGCATATGAGGGTGTC
AAGGATGTTTTAATTAGGAAGTGATCATAATATATATAAAGAGTGGATTA
TTTCTACTCATTATTGTTAGATTGGCCTCATTATTTTGTTATTCTAATTG
TTTAATTGAGGGCAAAAACTTAAAAAAATATTAGCAGTGAGAAACTGAAT
TTGTCAAATTTTTATTTTATGCTCACATTCATTCAGAGTCATGGTAAAGT
TAATTTTTCATTTTGCTTTTCCTTAAAATTAATTCCAGTTGGATTACAAT
TTACATGTATTAGGTATATTAATTTATAAATTATAATATATCATTATTTT
AGTATTTCTCAATGACGAATCTAACTGTTATATTTATTTTATAAATAATA
TATTCTGTCTTTGACGTATTCGTTATGAATTATTATTAACTTCAAAACTG
GGGAATGAATTGAGTGGCTTTTTACTTTTACTTGGATTTATTATAATATC
CATTGGGCGCTACGCTAGATATTTATAGGATGCATTTTTTCTGCCTCAAG
CATAAAGTAGCAAATGACATTTTTAGGATTTTGCTACATTTGAATTTGTC
TAGTAAGAGGTTGAGTGATTTATATATACTTATTCAGTCGCATATTTATT
GTTTATTTATTTATATTATCCTCAACTCTTGCAACATTTTAAATGCACGT
GGATTCCTGTATTTGAAAAACATAAAATGAAGGAAAAGAGATTCAAGAAA
ATCGTAAAAAACTTTGATCCAACATACCCTAAGAAGCCCTCTCTGAAAAA
TTTAACATCTCCAGAATGGTCTATTCCAAGTGCGAACCCGGCCACAGAGT
TCTTAGGAACGGCCCATGTGGAATCCTTCAACTTTGCCACAGGACCTGGA
TTGGAAATGATGATACAGGATTTGGAGCCTGTGGAATTTCTGGTTAATGA
TCAAAGGTTATCTATCGACATCGTTGATGCCGAGTTTCGACCCCCTGAGG
CTCCTGAAGGAGCATTGGGAATACGATGTCCATTGGTGTGTATAATCAAA
ACCCAAAAGTAGTCTCAAGGCTCATTTGTTAACTTATAATATTGTTATTT
CTCTCATTTAAAGGTTTACCCGGGAGAGGCACGTCAAAGAGGTACTACCT
ATAAAGCCTGTGCCATCATTAAGGTCCGAATAACCCTCAATGGAGTTTTA
CAGCCCTGGATCTTGGAAAGATCTCTAGGCTACCTGCCTATTATGGTCAA
ATCTAAAATTTGCAATCTGAGTAACATGTCACCCAAGGAATTAGTAGAGA
AAGGAGAACATCCGTCAGAGTGGGGAGGATACTTTGTGATAGGAGGGCAT
GAACGTCTTATTCGAATGCTCATATCTACAAGAAAAAATTNCCCCATTGC
CATGTGTCGCCCCTCTTGGAAAAACAGAGGGAAACATTTTTCAGAGTATG
GTGTCCTATTGGAATGCTCCAAACCAGATTTGACTGTCACGAAAAACGTT
CTTCACTTTGTTACGACAGGATCTGCAAAATACATGTTTTCATTTGGTCG
TCAACTTTTTTTTCGTGCCCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCC
ATGTGTCGCCCCTCTTGGAAAAACAGAGGGAAACATTTTTCAGAGTATGG
TGTCCTATTGGAATGCTCCAAACCAGATTTGACTGTCACGAAAAACGTTC
TTCACTTTGTTACGACAGGATCTGCAAAATACATGTTTTCATTTGGTCGT
CAACTTTTTTTCGTGCCCGTGATTATGATTTTAAAGTGTCTGACTGAGCG
TACAGATGCGGATATATATGCTCACTTAATAGCTGGTACTTCTGAAGATG
ATCATTACTACAGGTCTTGTCTTAAAGAAATGCTAACTGAGCCACATGCT
GAAGGCTTATTCTCCCCTGAGCAAATCCGTCTGTATATTGGTAAATCCTT
TAAAGACAAATTGAAGGATGCGTTGCCGGAATGGACGGAGGATGAGGATA
TTTGCAAATATTTGATCAAATATTCAATTTGTATTCATGCTAAGGATAAT
GAGGATAAGTTCCAAACCATTGTCTTTATGATCAAGAAACTATTTGCCCT
CGTTCAAAACCGTTGTGTTGTCGAAGGAGTAGATTCCGTCATGATGCAAG
AGGTTACAATTGGTGGACANTCTTTATCTTCAACTACTAAAAGATAAATT
AAAAATATGGCTTTCCTCTCTGAAGTATATCATTCTTAAAAAAGCCAAGT
CTGAAAATAATTTCGAAGTGAATGCTTTGAGCATAAGTAATGCTATTAAT
AAAATGAGTCCAATTGCTCAATCATTTGAGTCGTTCCTATCTACGGGGAA
TATTCCAAATGCATCCTCACTTGGTCTTATGCAAAATTCTGGTATTTCGA
TTATGGCTGAAAATATTAATCGTATGAGATACATGTCCCACTTTCGTGCC
ATACATCGTGGTTCTTTTTTCCAAGAAATGCGAACGACAGAAGTTCGAGC
TCTGTTACCTGACGCATGGGGCTTTATTTGTCCTGTTCATACTCCTGATG
GTTCTCCCTGTGGGCTTTTAAATCATTTTACACTTAATACGGAGGTCATC
ACTCATGCTCCGGATGCCTCCAAAGTACCCGAAGTTCTTTATGATTTAGG
CGTAGTGTCTGTCGATGAGGGAATTCAAGGTGGCAATGGAAAGTCCGTTA
CTCCTTCCTATAGTGTATTCCTGAATGGTATACTTATGGGATATGTAAAT
GGAACTAGTCAAACCAAGGAAATTGCAGACAAATTAAGAATTCTTAAGGT
TCGTAAAGAGAGAGGAGTTCCTAGAGTAATGGAAATAGTACTTATTCCTT
ATGACGACGATTCAAAGTTGCAAGGTCAATATCCTGGTTTGTTTCTATTC
ACTGGACCTGCTCGTATGATGAGGCCTGTCATAAACTTASCTGCCGATGA
TGTTGAGTTTATTGGTACTTTTGAGCAAGTTTTTCTGAATATTTGTATTC
AACCCGAGGAAGCATACCCTGGTGTAACTACTCATCGTGAACTTCGTCCA
ACGACTTTCCTAAGCAATTTAGCTTCTTTAATTCCATTACCTGATTTTAA
TCAGTCTCCTAGAAACATGTATCAGTGTCAGATGGGGAAGCAGACCATGG
CAACGCCAATTCATACGTGGCATTCGAATAGTGAAACCAAGATCTATAGA
CTTCAAACTCCGACAAGTCCATTTTTCCGACCTGTTCATTATGATTACAT
TAAACTAGATGAATTTCCTATGGGTACAAATGCTATAGTAGCTGTGATTT
CTTATACGGGCTATGATATGGAAGACGCAATGATTATAAATAAATCTTCT
TTCGAGAGAGGATTTTGCTCAGGATCTATATATAAGGCACAATTCATTGA
CTTGAAAGAAATTTCTGCCGGTAGAAAAAGTTATCGAAACACGGACACAT
GTGATCTATACTTTGAAAGAAACCCTAATCGTGATTTATCCAAGCATTTA
GATGCAGATGGACTTCCCTATCCCGGGGTCCCTCTTTTTAATGGAGATCC
TTTATATTGCTATCGGAGTAGAATAGATGATTCATATGTATTGAAAAAAT
ACGAAGGTAATGAGTTAGCTTTTGTAGACTCCGTTAAAATACTCTCGAAC
GACTTGGGAACCGGGGAGCTAACTCGTGTTTCCATTTGCTATAGAATCCC
TCGAAATGCATCTGTTGGAGACAAGTTTGCTTCTCGTGCGGGGCAAAAGG
GTATTTGTTCGAGAAAGTGGATCACTGAAGATCTACCTTGGACTGAGTCC
GGTATTCATCCAGATATTATATTTAACCCACACGGCTTTCCTAGTCGTAT
GACAATAGCTATGATGGTCGAGTGCATGGCTGGTAAAAGTGGAGCAGCTC
ATGGCATAGTTCATGATGCCACTCCATTTACTTTTTCAGAAGACAGAAAT
AATGATGCTATAGATTTTTTTGGAAAGCAGTTGGAAAGTGCTGGCTATAA
TTACTATGGGACAGAGACGATGTACTCTGGCACTGATGGTGTGGAAATGA
AAGCAGAAATATTTTTCGGAGTAATTCATTATCAACGACTACGACACATG
GTTAGTGATAAATTTCAAGTTAGAAGCCAAGGTGCAATAGATCAAGTGAC
TCGACAACCAATTAAGGGTAACTAAATTAATCAAATAAAACGGTTTTTTA
TTAATCTTTCTTTAATTTTAATTTTGTTTTCAGGACGTCGAAGAGGTGGT
GGTGTAAGATTTGGTGAAATGGAGAGAGATGCACTTTTGTCGCATGGTTC
TATGTTTTTACTACAAGATAGACTCTTCCATGGCTCAGATAAAACTCGTG
TCCAAATTTGTACTCGCTGCGGTTCCTTACTTTCACCTCGCGTCTCTGTA
TCCAAAAAAAATACGGCACTTGGAGGGGCTGCTGTCCCAGGGAAGGMCAC
TTGTGTAATATGCAAAAAAACTGATCAGGTGTCTGAATTAGACCTTCCTT
ATATCTTCCTTCATTTGGTTGCACAATTAGCCGGCGTTAACATCAAGGTT
CGACTAGAAACGACACATAGCTAA back to top
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