EMLSAT00000008613, EMLSAT00000008613-704460 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008613
Unique NameEMLSAT00000008613-704460
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s530supercontigLSalAtl2s530:662345..663412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008613 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008613EMLSAG00000008613-691379Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038239EMLSAE00000038239-747167Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779200auto779200Lepeophtheirus salmonispolypeptide
EMLSAP00000008613EMLSAP00000008613Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008613

>EMLSAP00000008613 ID=EMLSAP00000008613|Name=EMLSAP00000008613|organism=Lepeophtheirus salmonis|type=polypeptide|length=355bp
MDAFLKTGKIGVFKHTNGTKTSKSSKGPAPWVEKYRPKTVDDVAYQDEVI
LVLKKSLQGADLPNLLFYGPPGTGKTSTILAACRELFGDAYKDRILELNA
SDERGISVVRHKIKNFAKLTAGGTLPNGKSCPPFKVIILDEADSMTKDAQ
SALRRTMEKEGKSTKFCLICNYVSRIIEPLTSRCAKFRFKPLEKSILSIR
LESIAQKEKLNIKDTKALNAFIQTSEGDLRRAITSLQSCSRFSAGTPITE
DIVLETAGVIPNEWISSLKKACASNSYEKVEAFVDNLIAEGYSASQLFIQ
VHEWVLSPEDHDFKDIGKANIAEAIAVNEHRLLEGSNEYLQIMDLCCVIM
KEMNK
back to top

mRNA from alignment at LSalAtl2s530:662345..663412-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008613-704460 ID=EMLSAT00000008613-704460|Name=EMLSAT00000008613|organism=Lepeophtheirus salmonis|type=mRNA|length=1068bp|location=Sequence derived from alignment at LSalAtl2s530:662345..663412- (Lepeophtheirus salmonis)
ATGGATGCATTTCTAAAAACGGGCAAAATAGGAGTATTCAAGCATACTAA
TGGTACAAAAACGTCAAAATCCTCAAAAGGCCCTGCTCCATGGGTTGAAA
AATACAGACCTAAAACCGTAGATGATGTTGCCTACCAGGATGAAGTTATA
TTGGTCCTTAAAAAGTCATTACAGGGAGCGGATCTTCCTAATCTTTTATT
TTATGGACCACCAGGCACCGGTAAAACATCAACCATACTCGCAGCTTGTC
GTGAATTGTTTGGAGATGCATACAAGGATCGTATTCTAGAGTTAAATGCT
TCCGATGAACGAGGAATATCAGTTGTTAGACATAAAATTAAGAATTTTGC
TAAACTAACGGCCGGAGGTACTCTTCCAAATGGGAAGTCCTGTCCTCCTT
TTAAAGTCATCATTCTGGATGAAGCAGACTCCATGACCAAGGATGCACAA
TCTGCTCTTCGTAGAACCATGGAAAAGGAAGGAAAGTCCACAAAGTTTTG
TCTTATTTGTAATTATGTTTCTCGAATAATTGAGCCTCTGACATCTCGTT
GTGCTAAATTCCGTTTTAAGCCCCTTGAAAAGAGCATTCTTTCTATACGT
CTGGAGTCTATTGCTCAAAAAGAAAAGCTTAACATTAAGGATACCAAGGC
ACTCAATGCCTTTATACAAACTTCAGAAGGAGATCTTCGTCGAGCTATTA
CTTCCCTTCAGTCGTGCAGTCGGTTTTCCGCTGGTACACCCATCACCGAA
GATATTGTATTGGAAACTGCGGGTGTTATACCCAATGAATGGATTTCCTC
TCTAAAAAAAGCATGTGCATCTAACTCATATGAAAAAGTTGAAGCATTTG
TAGATAATCTTATTGCTGAAGGGTATTCTGCCTCTCAATTATTCATTCAA
GTTCACGAATGGGTATTGTCCCCTGAAGATCATGATTTTAAGGATATAGG
AAAGGCCAATATAGCTGAGGCAATTGCTGTAAATGAACATAGACTCCTGG
AGGGATCTAATGAATATCTTCAAATCATGGATTTATGTTGTGTTATTATG
AAAGAGATGAATAAGTGA
back to top
Add to Basket