EMLSAT00000008616, EMLSAT00000008616-704463 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008616
Unique NameEMLSAT00000008616-704463
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s530supercontigLSalAtl2s530:680783..681393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008616 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008616EMLSAG00000008616-691382Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038245EMLSAE00000038245-747173Lepeophtheirus salmonisexon
EMLSAE00000038246EMLSAE00000038246-747174Lepeophtheirus salmonisexon
EMLSAE00000038247EMLSAE00000038247-747175Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779303auto779303Lepeophtheirus salmonispolypeptide
EMLSAP00000008616EMLSAP00000008616Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008616

>EMLSAP00000008616 ID=EMLSAP00000008616|Name=EMLSAP00000008616|organism=Lepeophtheirus salmonis|type=polypeptide|length=149bp
MRIPKVHILVCLFLLVSVVNGNDDESAPKKKTVTKLQVGIKKRINDCTVK
SKKGDTVSMHYTGTLHETGEEFDSSIPRGDPLKFKLGSGQVIKGWDQGLI
GMCEGEKRKLIIPPELGYGASGAPPKIPPNSALVFEVELIQIIPESDEL
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mRNA from alignment at LSalAtl2s530:680783..681393-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008616-704463 ID=EMLSAT00000008616-704463|Name=EMLSAT00000008616|organism=Lepeophtheirus salmonis|type=mRNA|length=611bp|location=Sequence derived from alignment at LSalAtl2s530:680783..681393- (Lepeophtheirus salmonis)
CAGAATCCTCGAGTGTTAGTCGCAAATATGAGAATACCTAAGGTCCATAT
TCTTGTTTGCCTTTTTCTATTAGTTTCTGTGGTCAATGGAAATGATGACG
AATCAGCTCCTAAGAAAAAGACTGTGACAAAACTTCAAGTTGGAATTAAA
AAACGGATTAATGATTGCACGGTCAAATCTAAGAAGGGAGACACCGTATC
AATGCATTATACGGTGATGAGCTGTTATCTGAAAAATATCATTTCTTTAA
TATTTTTTTCTATTATCTAATTATAGGGTACATTACACGAAACAGGGGAA
GAATTTGATTCTTCAATTCCCAGGGGCGATCCTTTAAAGTTTAAATTGGG
ATCTGGCCAAGTAATTAAAGGATGGGATCAAGGTCTCATTGGGTAAGTTC
GGTTTTTTAATATACTGTACAGAATGCATCAAATATACACAATAAAATTG
TATTTCTTCTCAGTATGTGTGAAGGTGAGAAACGTAAGCTCATAATCCCT
CCCGAGCTTGGCTATGGAGCATCTGGCGCCCCTCCTAAAATTCCTCCAAA
CTCAGCTCTTGTGTTCGAAGTGGAATTAATTCAAATAATTCCCGAAAGTG
ATGAACTTTAA
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