EMLSAT00000008638, EMLSAT00000008638-704485 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008638
Unique NameEMLSAT00000008638-704485
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s532supercontigLSalAtl2s532:253483..255997 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008638 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008638EMLSAG00000008638-691404Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038312EMLSAE00000038312-747240Lepeophtheirus salmonisexon
EMLSAE00000038313EMLSAE00000038313-747241Lepeophtheirus salmonisexon
EMLSAE00000038314EMLSAE00000038314-747242Lepeophtheirus salmonisexon
EMLSAE00000038315EMLSAE00000038315-747243Lepeophtheirus salmonisexon
EMLSAE00000038316EMLSAE00000038316-747244Lepeophtheirus salmonisexon
EMLSAE00000038317EMLSAE00000038317-747245Lepeophtheirus salmonisexon
EMLSAE00000038318EMLSAE00000038318-747246Lepeophtheirus salmonisexon
EMLSAE00000038319EMLSAE00000038319-747247Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775346auto775346Lepeophtheirus salmonispolypeptide
EMLSAP00000008638EMLSAP00000008638Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008638

>EMLSAP00000008638 ID=EMLSAP00000008638|Name=EMLSAP00000008638|organism=Lepeophtheirus salmonis|type=polypeptide|length=476bp
ENCLQYDVDVLRILENGIREPNSSWPLVSCQNGWHYEFENYYNSVAWEFN
FVCENSWKGPLTETVYFVGSSLGMLMYGWIGDYLGRYWTVILSNWFVCLC
GMGLGFSNSYVIYTFIRFLMGISTVTTLTSFFVLAMEYVSKSKRTFIGNF
SLGLGIAIAGSIMPALFYVLKDWRLVNHAMYAQVSLTFLLPFFIHESVRW
LLERGQYNKAGKILEKVAKFNGRTLDKNIILELNVGSVHTLLRYFSRDNE
NDDEETKKVTSILEFFKTPRLRRHIITMIVLWTLVKVLFETHLRSIKNLE
VHVYYSFALSSLLEFPADLLIIWTMEMFGRRWMSVITLVLSGIPMLIAVY
FEVNEGDALILMVLSMIGRFCCTXVINVVMQFQFEICPTDLRTRGSGLIL
FVAEFVALLAPLIVFSSSIYSFLPNLIMGVGGVTVGFLALXLPETSGIEL
PANAKEGEDFGLDQSFFDVPIFRGKS
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mRNA from alignment at LSalAtl2s532:253483..255997+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008638-704485 ID=EMLSAT00000008638-704485|Name=EMLSAT00000008638|organism=Lepeophtheirus salmonis|type=mRNA|length=2515bp|location=Sequence derived from alignment at LSalAtl2s532:253483..255997+ (Lepeophtheirus salmonis)
GAAAATTGTCTGCAGTATGACGTGGATGTGCTCCGGGTAAGATAAACAAA
AGTTCATAAATAAATACTTCTAAAAGTGTTGGATTCGAGCTCTAACTCTA
CAGTTCGAGTATTTAAATATTGAGTTGAGTTCAAGTTTTTCTGCATTGAG
TCCAATGGAACTTGAGTTCGAGTAACGCCATATGGCAAGGAGCAAATTTT
TTGCATTGGATGATTATAATCTAAGCTAAGCAGTTAAGTCAGTTTGACTA
CCTCAATAAGGCATTCCATCAATTATTAATCAAATAATATAAATAATTTT
AGAAAATATGTATTTAGAAAATAAGAAATTATTTCAAAAATTGTATTTAT
ATGATCACAATAAAGCATAAGTTAAATTAATTTAAGTCCTTAGCAGCAGT
AAAAAAAGACACTCTCGCTCAGGACTGAAGTTGCTGGATTGTAAAAGTAT
TTCAATGTTGATCAAACAATTTTTGAAAGGCCTTTTTTCCTTCTCAGTTC
CGTCACGTCAATATCCTTTAATGCAAGGTAGTTGTAGAAATGGATGAAAT
TAATTTTTTGTGGTGTTTAACATATACTCGATTATTTCTAGTTTTAACCG
TTCGAGTTTAAGTTGAGTCTTGTTTTTCAAATAAAATTTCGGGAAAGGTA
GAGTCATTTTAAAAAAAATGTCTTCCCTATTAATGTTGATTTTTTGAATT
CGAGTAATAAACGAAGCCAACACTTATTTCTAATGTATCCTTGAATAACA
GATCCTTGAAAATGGAATTCGAGAGCCCAATTCTAGTTGGCCACTGGTTA
GCTGCCAAAACGGATGGCATTATGAGTTTGAAAATTACTACAATTCTGTA
GCATGGGAGGTAAAGATAGAAAATATTAATTAATATGATATGGGAAAAGT
AAATGACTCTCTATGAAGTTTAACTTTGTTTGCGAAAACTCTTGGAAAGG
ACCCTTGACCGAAACAGTTTACTTTGTTGGATCTTCACTCGGAATGTTAA
TGTATGGATGGATTGGAGACTATTTAGGAAGATACTGGACTGTTATCTTA
AGCAATTGGTTTGTTTGCTTATGTGGAATGGGATTAGGATTCTCAAATAG
TTATGTTATATATACGTTCATTCGTTTTCTAATGGGAATATCTACTGTCA
CAACCCTAACGTCTTTTTTTGTTCTGGGTAAAGCATTTTAATTATAGTAT
AAACCAATTTTATTTATTTTCATATCAGCTATGGAATACGTTTCTAAATC
AAAAAGGACTTTCATCGGAAACTTTTCTCTTGGATTGGGAATTGCAATTG
CGGGTTCCATTATGCCAGCATTGTTTTATGTTTTAAAAGATTGGAGACTT
GTGAATCATGCCATGTACGCACAAGTTTCACTCACATTCTTGTTACCATT
GTGAGTATTATGTATTGCCAATTCTATTGAGCTCTGTCTACTAAATGTAG
GTACTTTGATTCACATTGTGTTTTAGTTTTATTCATGAATCTGTTAGATG
GCTCCTTGAGCGTGGGCAGTACAATAAGGCTGGTAAAATTCTCGAAAAAG
TAGCTAAATTCAATGGAAGGACATTGGATAAAAATATTATCCTGGAGCTC
AACGTGGGTTCTGTTCATACTTTATTAAGATATTTTGTCAATTCTTCCAT
TTGATTTTTCGTTGTTTTTTCTAAATAACTATACATTTTTAGAGTCGTGA
TAACGAAAACGATGATGAAGAGACAAAAAAAGTTACAAGTATCCTTGAAT
TCTTTAAAACTCCAAGACTTCGAAGGCACATCATTACTATGATAGTACTT
TGGTATTATTATTTTTATATAATATACATTATACATTGACTCAATTTTGA
TTTTTTACCTATTCAACTTCTAGGACACTGGTCAAGGTATTATTTGAAAC
ACATTTACGAAGTATTAAAAACTTGGAAGTTCATGTTTACTATAGTTTTG
CATTATCTTCCTTACTAGAATTTCCAGCGGACTTACTCATCATCTGGACA
ATGGAGATGTTTGGTCGAAGATGGATGTCAGTAATTACACTTGTTCTCTC
CGGAATACCAATGCTGATAGCAGTTTATTTTGAAGGTTTTTATTTACATA
ACATTAAATGAGTTACATCTTTTGCTTTCCACTATGTATAGTCAACGAAG
GAGATGCACTAATTCTGATGGTTCTTAGTATGATTGGAAGATTCTGTTGT
ACCMTGGTTATTAATGTAGTTATGCAATTCCAATTTGAAATATGTCCAAC
AGATCTAAGAACACGTGGCTCTGGACTGATATTATTTGTAGCAGAATTTG
TGGCTTTACTGGCTCCACTCATAGTCTTCTCTTCTAGCATATATAGTTTT
CTACCTAATCTCATCATGGGAGTKGGAGGAGTAACTGTTGGATTTTTGGC
TCTAMCCCTTCCTGAAACTTCAGGAATAGAATTGCCCGCCAATGCTAAGG
AAGGAGAAGATTTTGGATTAGATCAAAGTTTTTTTGATGTTCCTATTTTT
AGGGGAAAATCTTAA
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