EMLSAT00000008649, EMLSAT00000008649-704496 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008649
Unique NameEMLSAT00000008649-704496
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s534supercontigLSalAtl2s534:256650..259753 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008649 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008649EMLSAG00000008649-691415Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038364EMLSAE00000038364-747292Lepeophtheirus salmonisexon
EMLSAE00000038365EMLSAE00000038365-747293Lepeophtheirus salmonisexon
EMLSAE00000038366EMLSAE00000038366-747294Lepeophtheirus salmonisexon
EMLSAE00000038367EMLSAE00000038367-747295Lepeophtheirus salmonisexon
EMLSAE00000038368EMLSAE00000038368-747296Lepeophtheirus salmonisexon
EMLSAE00000038369EMLSAE00000038369-747297Lepeophtheirus salmonisexon
EMLSAE00000038370EMLSAE00000038370-747298Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775423auto775423Lepeophtheirus salmonispolypeptide
EMLSAP00000008649EMLSAP00000008649Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008649

>EMLSAP00000008649 ID=EMLSAP00000008649|Name=EMLSAP00000008649|organism=Lepeophtheirus salmonis|type=polypeptide|length=309bp
MTLSSNVTGSGTSSSMTPKELSDYDDIATALIVDPYLGFQTHKMSQRFRP
PKESDTKSLRKSVLDFIQNQNFETTYKELMLVDWTKTLNKRSKVSQASLK
EHIFRYLRMFDLKSGFIISPCHRYSLEGQMGAKISSTKSWAKGDQITYLI
GCIAELTEEEENVLLVPGKNDFSVMYSCRKNCAQLWLGSAAYINHDCRPN
CKFVATGRDRACVKVLRDIAPGDEIMCMYGEDFFGDNNCYCECETCERRG
TGAFAKLKSESPEKDQGYRLRETQLRLNRTKLKNETTKPVTTTINKITTP
LPPPPPPXP
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mRNA from alignment at LSalAtl2s534:256650..259753+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008649-704496 ID=EMLSAT00000008649-704496|Name=EMLSAT00000008649|organism=Lepeophtheirus salmonis|type=mRNA|length=3104bp|location=Sequence derived from alignment at LSalAtl2s534:256650..259753+ (Lepeophtheirus salmonis)
AAGAAAAGGGTTTGGCTCGGATCGAGATGATCATGAAAGAAAAAGCAAAT
TGGGTAAGTAATATGGACCATCGTACTGACTACAAAAAGTATTAAGGTCA
TGGAATGGCAGGGAAGAGAGKAAGTGAGTTGGGGCAGGGAGGGAAGCGAC
GTTCATGGAGGAAAAAGAATAATAAAGCGAGGGAGAGAGAAAGAGAAAAA
AAAGAGGCGAGTTTGTTGTGTGAGTAGTGCAGCTAGACGGCTAGAAATGC
CTTCTTTTTCTTTCCTCCCCCCTCTCACTTCTTTGCTCAGTTGAATTGAA
TTCAACCTTTTCTTTCTTTCTAGCTATACCAGAGTTGCTGTGCCAAAACT
GCCAACTAATTCATAACTACCGAAATTTCCTCTTTTCTCCTTTAGAGATT
AATCCTTCTTTTCGGATCATCATCATCGTCAATCCCGGAACAAAGAATAT
CATTGCCAGCCATTTCTTATTCCATTGCCTGATTTGACTCTTTCTTCCCG
TGAGTTCTCCCGTTTCCTTCTAAAATTCCAAGAGGAGAGATTCGAAATCC
CTCTTTTGAATCCCGCTTGAATGTGCATTTAATGGTACTTCCATGAATTA
AAGCTTTAAAGGTAAATTATATTCACGCTCTACCGGATGGATTCCTTCTC
TATTCTGTGTTTCCATTTATTTTAATGCTTTGTCCTTTCACTTTCCGGTT
TTCATTTGGGTATTTTCCCCATGAATTAATGAAATTCTTCAGGACTCTTG
TTTCCTTCGGATTAGATATTCGTTCTTATCGTTCCCTCACTCCTTAAATC
ACAAAGAGTCGTAATTGTCCATCTTTGTTTTTTCCTTCTCATTTTGGAAA
CGATACAGCAATAGACGATAGGGATAATAAAAACAGTCTCCAACTCCTTA
TGTTTGAGGAGATGGGCTTACCTCATATGTTTGTTTTTGACCCCTTTTAA
TTTGAAATGCTACTTGTTTACTCTTGAAATTTATACTCTTTGCCCCTCCC
TCACACACACTTGATTATTGGCTAACCTTCTTTTTCATATGGCTGGRTTT
ATAGATTGGRTATTGTCTTGGATTTCTTGTTCACTTATATATTTTCCCAG
AAAAATCAATTGTGGAATTATGTGTATTGTGTGAGAATAATGCACTTCAC
CTCTATTAATGTGTAATAATTGGATGTAATTTAGTCATCGATACAAAAAT
ATTTGATATACATACAACTATAAATAAATAAACTAATTTCCTTCTCAGGT
CGAAAATCCATTTACTCATAACATGACACTGTCATCAAATGTAACTGGCT
CAGGAACATCCTCAAGCATGACCCCCAAAGAATTGTCAGACTATGATGAT
ATCGCTACTGCCCTTATAGTAGACCCATACTTGGGGTTTCAAACACATAA
AATGAGCCAGCGGTTTCGACCTCCAAAGGAATCTGATACTAAATCTCTTA
GGAAATCTGTTTTAGACTTTATTCAAAATCAAAATTTTGAAACAACATAC
AAAGAACTCATGTTAGTTGATTGGACTAAAACATTGAACAAGAGGTCGAA
GGTATCCCAAGCCTCCTTAAAAGAACATGTAATGAATATTGCTGTAATGA
TGTATCTGTGCGATAATTATTATTTTGATTTTAGATATTTCGATACTTGC
GAATGTTCGATCTCAAATCTGGGTTCATCATTTCACCTTGCCATCGATAT
TCCTTAGAAGGGCAAATGGGTGCCAAGATAAGTTCTACAAAATCTTGGGC
TAAGGGAGATCAAATAACTTATTTAATCGGCTGCATTGCCGAATTGACAG
AAGAAGAAGAAAATGTTCTTTTAGTTCCTGGAAAAAATGATTTTTCCGTT
ATGTATTCCTGCAGAAAAAATTGTGCTCAACTTTGGTTGGGATCCGCAGC
TTATATTAATCACGACTGTCGGCCCAATTGCAAGGTAATATTTATTTTGT
ACGATTGATCCAGTTTTATATATGATATGGTTTTTTAATTTTATTATTAT
AACAAAAATCAGTTTGTGGCAACTGGTAGAGATAGAGCATGTGTCAAAGT
GCTTCGAGACATAGCCCCTGGGGACGAAATTATGTGTATGTATGGTGAAG
ATTTTTTTGGCGACAATAACTGCTACTGTGAATGCGAAACTTGCGAAAGG
TAATTGTCGAATATTATTTTGTTGTCTACTTATTCGCTAAATAAAACTAA
TTTGTTCAATTAGGCGAGGAACTGGTGCATTTGCAAAATTAAAATCCGAA
TCTCCAGAAAAAGATCAAGGCTACCGACTCAGAGAAACTCAGCTTCGACT
CAATCGGACAAAGCTAAAGAATGAAACAACAAAGCCCGTTACAACAACAA
TAAATAAAATAACAACTCCTCTTCCTCCCCCTCCTCCACCNNTCCCCTGA
GACCAACGCGTCAACAACAACCTGCTATGACCTACCGGGATCTAAGGTTA
AGAGGGTTTACAGGAACCCGGTATGATGCAGATATTCTTATACGTCAAGG
TTATACTTTTGAAGATCTAAAAAATCTAACTGCATCCTCTTCCAGTGGGA
ACTCTGTAACTACGACGCGCTCATCCACTGCCAAATCTAGACATAATTTG
AAGAGTAACGACAGATCCAATTACAATGTAACTTCTAGGTCACTTAGAGA
TACTCCTGGACGATTGAGAGCACGCTGTGAAAGAGGAAGAGCTGCTTCAG
ATAGTTCAGGAATTTCTGATGACTCAAGTTCAACTAGTTCTGGAAGTGAT
TCCGGTATAGACGTTGATAACGATTCCACTTCAAGAAGGCCCGTCAATCC
AGTAACTAACGGTATTAGAAAAACTTTAGAGAAAATGAATTTGAACCGAG
AAGGTACTCCACCTCCTCCTCCTCTTAAAGACAGTAGTGACGATTCAACA
GTATTCTGGACTACTCCTACTAAACGGACCACTACGAACAACGCGACTCC
AAGAGGTTCTCCTGGTGTAAAATTGACTTTAAGAATGAAAAGGTCACCTG
TTCTTGATGAGGTTTTAGAGAATGGAAATTCTCTTCATTCAGCATCAAGT
GCTTCTCCAGTAAAATTTCGGAGACTGGAGTACGAAGTGCTTCGTATGGA
AGGA
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