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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s539 | supercontig | LSalAtl2s539:255329..261638 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008692 >EMLSAP00000008692 ID=EMLSAP00000008692|Name=EMLSAP00000008692|organism=Lepeophtheirus salmonis|type=polypeptide|length=592bp
MSEISSFNIYLYFSLLTLFSIYGPEKFFDEFWSPLIVHSPSGLVQGAREK
GHQAFYGIPYALPPTGERRFRSPEPYPTPWKRTLQAGRSYPPACPQQLRS
YFKSLLWDVEGNEDCLYLNIFSPDSASLQLSNESPPSQENLFPVMVWIHG
GNFMSGTASDYESIYFMTKDIILVMISYRLGPLGFLNLGEEYARGNQGIE
DQILALSWIQDNISSFGGDPQRVTIFGESSGAISVLHHMSVPMSKLLFQS
AIIQSGSIYQPTIKETFMMEMHEAWIAEMGCIGVIDTQECIQKLPLAKIV
NKNPFLSDCNLKKNGHPFPNPWFPVLEGSYLLKEVSAENKKSHAPRVMIG
TTSNEGFLATSRFMLQNNYTEGFMSKWEECFKLNTAGDESYDLEPVMDYY
FGSNKKPDFPSQVQNFSNLISDFWYNGPTFETVKEIANKGSPVYYYLYDH
DGFLSMTDSLSRASYDYWKFIVRYAFGQESGKTNGASHADELPFLFREYP
RNLLKRPVDEKMWRLMIDVWTNFATSGDPNGAKEGYNWKPVSHKNDYTYI
VLKNGEIKFPSHGQMKEQRDRLKIPKHLMWTSEKLSYQTHNA back to topmRNA from alignment at LSalAtl2s539:255329..261638- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008692-704539 ID=EMLSAT00000008692-704539|Name=EMLSAT00000008692|organism=Lepeophtheirus salmonis|type=mRNA|length=6310bp|location=Sequence derived from alignment at LSalAtl2s539:255329..261638- (Lepeophtheirus salmonis)
ATGTCTGAGATATCTTCTTTCAACATCTATTTATACTTTAGTTTACTCAC
TTTGTTTTCCATCTACGGCCCGGAAAAGTTCTTCGATGAATTTTGGAGTC
CTCTAATTGTGCATAGTCCCTCAGGTTTAGTTCAAGGAGCCCGAGAAAAA
GGCCATCAAGCCTTTTATGGTATCCCTTACGCTTTACCGCCCACTGGAGA
ACGTCGTTTTCGGTCTCCTGAACCATATCCAACTCCTTGGAAAAGGACAC
TTCAGGCTGGAAGAAGCTATCCCCCGGCATGTCCTCAACAACTCAGGTCT
TACTTCAAATCCCTTCTATGGGACGTTGAAGGGAATGAAGACTGTCTCTA
TCTCAACATCTTTTCACCAGACTCTGCGTCCCTGCAGCTATCCAATGAGT
CTCCACCATCTCAGGAAAACCTGTTTCCTGTGATGGTTTGGATCCATGGG
GGGAATTTTATGAGTGGGACTGCCTCAGACTACGAATCCATTTATTTTAT
GACCAAAGATATCATACTTGTCATGATATCTTACAGATTAGGTCCTTTAG
GCTTCCTTAATCTTGGAGAAGAGTACGCGAGGGGGAATCAAGGCATTGAG
GATCAGATTCTTGGTAACAGAAAAGCTAAAATTGAACGTCCAACTATTTA
ATTCTTAATTTAATAGCTCTATCGTGGATTCAGGATAATATTTCGAGTTT
TGGTGGTGATCCTCAAAGAGTAACGATTTTTGGAGAGAGCTCCGGAGCGA
TAAGTGTATTACATCATATGTCCGTTCCAATGAGTAAATTATTATTCCAG
TCTGCTATAATTCAAAGCGGTTCAATTTATCAACCCACAATTAAAGAAAC
GTAAATTTGAAAGACTCGTTTTATTCTGAATATTTGAATATACATAAATA
TGTCTTTATTTGTAGATTCATGATGGAAATGCACGAAGCTTGGATTGCGG
AAATGGGATGTATCGGTGTAATAGATACACAAGAATGTATTCAGAAGCTT
CCTTTGGCTAAAATAGTGAATAAAAATCCCTTTTTAAGTGATTGTAACCT
TAAAAAAAATGGACATCCTTTTCCTAACCCATGGTTCCCCGTCCTAGAGG
GAAGTTATCTCCTGAAAGAAGTATCTGCAGAAAATAAAAAATCACATGCA
CCCAGAGTCATGATAGGAACAACTTCAAATGAAGGTTTTTTGGCAACATC
ACGCTTCATGCTTCAAAATAATTATACTGAAGGCTTTATGTAAGCTCTTT
AAATTCTTTAAACACAACATTTTTATTTTATAAGAGGCTGMTGATGTCCA
TATGTCAGGTCAAAGTGGGAGGAATGCTTTAAACTGAATACTGCAGGAGA
TGAATCTTATGATTTAGAACCTGTTATGGACTATTACTTTGGCTCAAACA
AAAAACCTGATTTTCCATCTCAAGTGCAGAATTTTTCCAATCTCATCTCT
GATTTTTGGTATAATGGTCCGACTTTTGAAACAGTTAAGTATGTACTCTT
AAATTGTCAAGCAACTCATTCATATTCAATTCATGAGGTTATTTTAGCGA
AATCATAGATTTATATTTTATTAGTTTACTTTAATTATTATTATATTTAT
ACTGTCCCTTTCCTGTTAAAACATGTTATCCCTACGAAAAAATATGCTTC
ACACAGTATAATAATTTGTATATTGGCTATAACTCCTATTTTGCAAATTT
TGACAATTTTATGCCAAATTCAAAGTTGTGACAGCTCTTGATGCACCTCC
TACAAATTGAGGATATAAGAAACATCTTCTAAGCTATGGTGAATATTACC
CCCTTTAGTGTGTCTATCTTTATTATTTAATCTTCGTTTTTTATGCAATT
AAAAAACTTAAAAAACTCTGAAAAAAGGTAAAAATAATAAATACACACCT
TCTTCACATTGGTGGCATAATTAGCTTGAATATAATATGGTTGAAAGGGT
AATTTATTTACTGCCACATGTCTAAGCAAAGTAACCCTAGAATGAATAAT
AATGAGTGTATATTTTAGTGTCTCTGTTACACCTACTTTGTTATAAACTA
AATTTCATTGCATAATGTTATTTAACTAGGCGATTAGATCCATCTAATAT
GATTTGTCTGAAAAAATACTAACTTGATCGATTTATCATATAACATGCAT
CATCAACTAACCTGTTATATAATAATTGAAATTTTGGATCGCTAAAAACT
TTTAAAATGAGCGATAAATTATATTATAAAATAAACTACGAAGATTTAGT
TTCAATTTTATTAATCAAATGATCACGTCACATATTTTATAAAAAAGCAA
GTAAGAAATGTAGATATTTACATGAAAAACATAATTATGAACGATCCAAT
AAAGGAACCCTGTTCTTGTGTGAACAATTGCATTTAAAAAAAATCTATTT
AGAATTATGGTCCCTCAACTGTAATGACCTTAAAAAGTTTATTCATAGGC
GTGTTGATTAAAAGACTACAAAAACTGCTCCCAAAGCAATAACTGTAGCA
TCATCAGAATTATTGAAGGATTTGACCTGTTATACGGCACAGATGAGAAT
AAAAATCCAGACAGATTTAGGAAATCTGTCTAGATTTTTATTCTAATTCA
AATAATTTAATCTATAATGATGAATAAATATATTTTTTTATTGCTTGAAC
ATTATATCCGCTTTTACTTGAATTAAAATATTTTTAAATACTAAATATTT
TTAATACTAAAATTTTCAAATCAAGCAACAATAACAGTTCAGAAAAGTTA
TTTTAATATGATTTATTATTTTAATAGTTTTTAGGTCTTCAAAATTTCAA
ATAAAGCCGGCGAATTGATGAAACCATATATTACGAGAAATCTAATAAGA
AAGTCGTTATTCCTTTTTTCTTAGAAAAAATAATAGTTTTATATAATCAC
AAGATAATAATCATTTATTTGCTAAGATATGTTTTATCAGAAAGAGACAG
TATATATATCTTGAGTTTTACAAGATCTCAATTATTTTTATTTTTTGGGA
TATAGTGATATGTTTTAAGGAAAAATTGGAAAAAAATTAGTATTTGTTAT
TAATATTATGAATTAAAGATCCTAAAATCCTGTCTCAATGTTCCTTTAAG
AAAAAAATAATTTTTAATGATATTTTCTATTTTTGATACACTTATGGAGT
GCAATAATATAATGATCAATTTATGCGCTAAAAGTTTATTCTTAATCTGA
TAACCCTGAGATTCAGATATAGTGTCAATTTTATCCTGGATTGTGACTTT
TGGTYCTAATTGACACCAAATCGACAATTTGGTTATCTATATGTCCCGCT
TTTACCCCTTCGAAACCTGATCAAACAGCTACGAATGTTCCATTGCTCCT
CAGAGGTCGATATCAACCACTTTTAATCCTGAGATTCAGTTACTATATTT
TTGTGAACAAGTAGGGCTAAAAGTGTTAAAATATGATTCAAATTAATAAA
TATAGAATGTACAGGACAAAAAAACCTTTGACAAAAAATATTTTCCCTCA
TTTTTATTATTCTTGCATAACTTTTTTAAGTATCTATTCATAAATTGTAC
TCAAATTTTTGTCACTGTTAAAGGTAACCTCCAATTTTTATAAAAGCTCT
TAGTCCAAATTTGATCTTTAAATCCCCACACATCTCAAAGTTACACGCGT
TGAAACTTCAACTTATTCTCCCCCGAAACTTTACAAATGTGGATTATATC
CCTATCATTCTCATTCAATGAAAAAGTTTAACGAGTTAACAGATTCGAAT
CAAATTTGGTTGTATAATTGTCCTTTTCAGAAATGAAATATTGGATGTAT
AACTCAATCCAAAGAAATGATAGGCATAATTGAAAAATTATCAAATAGCT
AAAAAAATTACTTTATCTGTGAAATAATGATTTTCATAAATAATACGATT
ACTCCTAATTCCATGATTTTTTTTAATTATTAATAAAGCGTTCTATATTA
TACTGGTTTATGTTTTAAAAATATATATATATATATATATATTAAAGACC
ACCAATCTTAAAATATTTAAATTTTTTAACTTTTTTTTTTTTTTCATAAC
AAAAATAAATAAAAAATTATCGGATAKTATTTMATAGCTTCCCAATTATG
TATTATACTTCCCTATCATTGCTTTGGTTTWCAATTTATCTAATCAAAAT
GCGAATTTCTCCATTAAGACCTCAGAACCAAGTTGTTGTACTGAGTCACG
CATCCAATATATATCGCATCTTCTATCAATTATACCGCATACCAATTTTG
AGTCGAATCCATTTCCTCATAGAAAGTCTTATATATATATATTGAAAGGT
ACAGTCATTTAGAAATATAATTTGTTACATTCTAGAGAAATTGCAAATAA
GGGATCACCTGTCTATTACTATTTATATGATCACGATGGGTTTCTCTCCA
TGACAGACTCACTAAGTCGCGCATCGTACGATTATTGGAAATTCATAGTT
CGCTATGCTTTTGGTCAGGAAAGTGGGAAAACTAATGGAGCATCACATGC
TGATGAACTTCCATTTCTGTTTAGGTAAGATATCAAAAGGTATTTTTTTA
TGCTTAATTTTTAAATGAAATATTCTTTGGAATAGAGAATATCCTAGAAA
TTTACTCAAACGACCTGTTGATGAAAAAATGTGGAGACTCATGATCGACG
TTTGGACAAATTTTGCAACTTCGGGTGATCCGAATGGTGCAAAAGAAGGA
TACAATTGGAAACCGGTTTCCCACAAGAATGACTATACATATATAGTACT
AAAAAATGGCGAGATCAAATTTCCAAGCCATGGTCAAATGAAGGAACAAC
GTGATAGACTAAAGGTATGGGATTCTGCAATCATAAAGAAAAGGATCATT
ATCAAATAGTCTATTTTTATTTTTAAATTAAATCCGCCTCTTTATTTATT
TGACTGAGCACGGATATCACCAATGGATTCTTACTGGTGTGATAAATTTG
TGATAGTAATTGTTATTGGTTTTTTTATTTTTAAGGATGTAGTTGAATAA
ATTTTCTTTAGCATAGCTTATTACCTTATTTTATAGTCTTGATAATTTTT
TAGCGCTGCCCCATCCCATGTAGGCTCAACAAACACTTGAATTGCATATT
TAAAAAATATTTTTACTTGTGGGCAATATGAGTCACATGAGTATTTGTAA
TGGAGAATTATCACTATCTCAATCATTTATGAAGTTGTTAATAAACGGAA
TCATATGCATTACATCAATTAAATACTGATAGTGTATCTTTTTATTGCAG
CCGGTGTACATTGTATGTAAAGATCAATAAATGTACAGTTACCTTAACTA
GAAATAAGGATGTACTCAAAATTCTAAGATGGCTAGGGCCTATTCTAGGA
GTTTCCTTTAAAAGGTTGACTAGATTAGGATTACCTCTTTTTATATTAAA
GTCCAAAATTTGATTCCCCTAGAAAATAAATTTTCTCTTAANTTGTTATC
ATTACGTACTTTAGAAGTCACAGCGAAGGTAGACTTTATACGAAACAGCG
ATTTCAAAACGTTTGTCCCGTTCAAAATGAGACTTGGAGTAAGGAAAAAA
TGGATACTATTTGATTTTTCTAAATATCGTTTTCACGTGACGTCAGCATT
GTTGATGTCGGCTATTTTGGGGCCCTAAAACAACCAAGTCTTAAAGCAAT
GAAAATCCTTTTTGAATTAATATAAAAAAAAGTAATACACTATTATTATC
TAAGACTTGATATCAAAATGGAACCCATCAGATAAAAGAGAAAAAATATT
ATACTTCTATTGCAAAATTTAATTATATCTATGACCCTAAAATGTACATA
TTACATTGATTTAATTCAAGTATCAGTGTTTATCTTATGCATCAAGTAGA
TGATTATAGATAGTTTACTTGTGATCAATGCTAATGCGAAGTCTTTATTT
ATTCTTAATGGCATTTGATGATGTTACATCAAGATTTATTGGAAATTCGT
CCCTTTTATGAAGTAAAAATACTAACATTAAGCCTGTTTCAATTATTACA
GCATAAAAATGCAATATTTGCACCCTTAAATCTGGTCGATATGCACTATT
AACAAGTGAAACAAGAAACTTAGAAGCTTGAAACTCTCATTGAACATGAT
GATGAGATAAAACTGTGTGCAAGATATTCCGATGATGAAAAATTGATTTC
AGCACTCTCACCTTTAAAAATTGTTGATAAAATGTTGTGCAGGGGACTGT
GATTTGATACAAACTGACGTAATTTCCAATTATATTATATCTTACTACAG
ATTCCAAAACATCTCATGTGGACTTCAGAGAAACTTTCCTACCAAACTCA
CAATGCTTAA back to top
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