EMLSAT00000008697, EMLSAT00000008697-704544 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008697
Unique NameEMLSAT00000008697-704544
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s53supercontigLSalAtl2s53:1054459..1060191 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008697 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008697EMLSAG00000008697-691463Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038577EMLSAE00000038577-747505Lepeophtheirus salmonisexon
EMLSAE00000038578EMLSAE00000038578-747506Lepeophtheirus salmonisexon
EMLSAE00000038579EMLSAE00000038579-747507Lepeophtheirus salmonisexon
EMLSAE00000038580EMLSAE00000038580-747508Lepeophtheirus salmonisexon
EMLSAE00000038581EMLSAE00000038581-747509Lepeophtheirus salmonisexon
EMLSAE00000038582EMLSAE00000038582-747510Lepeophtheirus salmonisexon
EMLSAE00000038583EMLSAE00000038583-747511Lepeophtheirus salmonisexon
EMLSAE00000038584EMLSAE00000038584-747512Lepeophtheirus salmonisexon
EMLSAE00000038585EMLSAE00000038585-747513Lepeophtheirus salmonisexon
EMLSAE00000038586EMLSAE00000038586-747514Lepeophtheirus salmonisexon
EMLSAE00000038587EMLSAE00000038587-747515Lepeophtheirus salmonisexon
EMLSAE00000038588EMLSAE00000038588-747516Lepeophtheirus salmonisexon
EMLSAE00000038589EMLSAE00000038589-747517Lepeophtheirus salmonisexon
EMLSAE00000038590EMLSAE00000038590-747518Lepeophtheirus salmonisexon
EMLSAE00000038591EMLSAE00000038591-747519Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780328auto780328Lepeophtheirus salmonispolypeptide
EMLSAP00000008697EMLSAP00000008697Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008697

>EMLSAP00000008697 ID=EMLSAP00000008697|Name=EMLSAP00000008697|organism=Lepeophtheirus salmonis|type=polypeptide|length=1506bp
MEEILGKPWCKRLSLRSFMLSALAINIFISLTIANPRPKSKPQNGEEEYY
YTEYGEDYEGDNDYYYDNYDEYGAERGPQRGDQSPSERPETTTVTTKIEV
VRVLSKNRPSYYWSIDEGIEGYLMRTPTIYRVVSPGLHGDNSVSFEVENR
PGHYLIHRDGQLFVEEFRNNPTFKREGSWIIRQNQFFNGFTSFESAIRPG
YFIRHRNRRLQLSEILSDRDKEDAAFQMVDPYGGGIVERYDRWKSMIGRT
LRVESRAMPSNYWWVSRPRSDYPNEPLPSALRREWHVFRMVNGLGGEGTV
SFESTLQPGYFLRNRGGILTAERGQSRDGDYRRECSFRVTENKFFDGYVS
FHDMRNENLWIRQKNGALQLTELSNDSDKSDASFLMSEVEFVRPPPLPNN
ERPPPPPPNXERPPPPVTRPPPPPITRPPPPPITRPPPPPLITRPPPPPI
TXPPPPPITRAPPPPITRAPPPNLEPPVTRPPPPPIXRPPPPPVXRPPPP
PWPVTRPPPPEVTRPSPQPRPNTRPPPPRTTSIAPNYGSYGENEYYSTYP
CADYKPGEDDLQNFDFIRKFQLDVNLDGYPGVSRVRGSNQMQTAYGIDSS
ADLSMRTTRTFNQGLPEQFSFVTTFRAKEPIQNRWHLIRITDGSGNPQFA
VGLDPRRRTIEFSIMKYDRTLQTLTWNKDDIFVPVDQWTKVHFGVFRDNV
LLYVNCEPVGAQPLEVVDSRINLNGEILIAKDADSSATMPVDLQWMXMTC
DPDSVRRETCDELPQKEQPQLPQCEKTCPAGPPGSQGLPGRGGRPGEVGE
RGAPGRPGNTGETGKQGFPGLPGEIGRPGVQGSPGLRGPSGPEGLKGEIG
LPGPLGPPGARGKEGPXGKPGPSGEQGRPGLPGQQGKTGERGPAGDITTV
VGPVGPPGPKGSEGLSGLPGLDGIPGAKGERGEEGELGLSGKDGRDGSRG
PKGDIGQPGPTGLPGRSGRDGQPGPPGIPGALAAGDSVPGAPGPRGQDGN
PGSPGIPAAKGERGERGDQGERGDDGSPGLRGKPGPPGKDGTVGERGPPG
EGGARGDPGIPGKNGPPGPTGASGAVGQPGLEGPPGLPGDSGPSGRPGEK
GEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGMPGVQGLTGEKGPPGSQGS
PGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPG
IEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPP
GPPGPPGETITVMPNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGP
SGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDIC
ASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQ
RGFPGLPGMPGPYGSSGPKGDRGDRGDHGPPGIGESGPMGPRGNPGPIGP
RGVGEQGPMGERGAPGKRGKQGVAGGPGPIGPPGYCEFCDVLALQSNRQS
STKKGP
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mRNA from alignment at LSalAtl2s53:1054459..1060191-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008697-704544 ID=EMLSAT00000008697-704544|Name=EMLSAT00000008697|organism=Lepeophtheirus salmonis|type=mRNA|length=5733bp|location=Sequence derived from alignment at LSalAtl2s53:1054459..1060191- (Lepeophtheirus salmonis)
ATGGAGGAGATCTTAGGGAAGCCGTGGTGCAAAAGGTAAACTAGGATATA
TTTAAAAATATTAAAAAAATGGCATTGTATATGAGAGGATACTAAATTCC
AATGATACCCTCATTTTTATATCTGATAAGTTGCGTTATATTCAATTCAA
AACATTCCGTGACTCAAAAATGTTTTTTAAAGTGCAATCTGCATACATAT
TATTAATATAGCGTTATTTGTCATCTACATTCATAAATGAGAATAGATCT
GACCACTTGCTTATGATTTTGAAATATTCATGCAGATTGCCAAATTTCCT
TATATTTGCCCATGGTTATTATATTAAAAAGCATATGGTGATATAATTAG
ACTTTTGCCCTTTTTTTTATATTTTGAGATTTGAGACTACGAAGGACAAT
CTAATTTTGAAGGGTTATGAGTTAAATACAAAGATATTAAACCTTTTTTT
ATATTTCTAGACTCTCATTGAGGTCTTTTATGCTCTCGGCTTTGGCTATA
AACATCTTTATATCCTTAACTATTGCCAATCCCCGACCCAAATCCAAACC
CCAAAATGGAGAAGAAGAATATTATTACACCGAATATGGAGAAGATTATG
AAGGTGATAATGATTACTATTACGACAATTATGATGAGTATGGAGCTGAA
AGGGGTAAGTAGCTTGGTGAAATGTCTATAGGATAAAAAATATTATCTCC
ATTCTATGACTGTTTTAGGACCTCAACGCGGGGATCAGTCTCCTTCTGAG
CGCCCAGAAACAACTACAGTTACGACTAAAAGTATGAAAAATAGGTTTCT
ATCCAAGTTACTAATTACTTTATTTGCTTGAATTTTCACAGTTGAAGTTG
TTCGAGTTTTAAGCAAGAATCGTCCTTCTTACTACTGGTCTATTGATGAG
GGTATTGAAGGATATCTCATGCGTACACCGACTATTTATCGTGTCGTTTC
ACCTGGTCTACACGGAGATAACAGTGTTAGTTTTGAAGTCGAAAATAGGC
CTGGCCACTATCTTATTCATCGTGATGGTCAATTGTTCGTTGAGGAATTC
CGAAACAATCCAACATTTAAAAGAGAAGGCTCTTGGATTATTAGACAGAA
CCAATTTTTCAATGGTTTCACATCCTTTGAATCTGCAATACGGCCCGGAT
ATTTTATCCGACATAGAAATAGGCGTCTTCAACTATCTGAAATTTTAAGT
GATAGAGATAAAGAAGATGCTGCATTTCAGATGGTTGATCCTTACGGTGG
AGGTATAGTAGAGCGTAAGTTGCTTCTTTCTTTTAAAAGNAAAAAAAAAT
ACTAAAATTATCTTTTAACTAAAAAGGGTATGACCGATGGAAAAGTATGA
TTGGAAGAACTTTGAGAGTAGAATCAAGGGCCATGCCGTCTAATTATTGG
TGGGTCAGTAGGCCTAGAAGCGATTATCCAAATGAACCTCTACCTAGTGC
ATTAAGAAGAGAATGGCATGTGTTTCGAATGGTCAATGGCCTAGGAGGAG
AAGGTACTGTTTCCTTTGAGTCCACTTTACAGCCTGGCTACTTTCTTAGA
AATCGAGGAGGCATACTTACTGCAGAACGAGGACAGTCTAGAGATGGTGA
TTACCGAAGAGAATGTTCCTTCAGAGTAACGGAAAATAAGTTTTTCGATG
GGTATGTTTCATTTCATGATATGAGAAACGAAAACCTGTGGATTAGACAA
AAAAACGGTGCTCTTCAACTAACTGAATTGAGTAACGATAGTGACAAAAG
CGATGCATCCTTTTTGATGAGTGAAGTAGAGTTTGTAAGGCCTCCACCTC
TTCCAAATAATGAAAGACCCCCTCCMCCTCCTCCAAATMCTGAAAGGCCC
CCTCCTCCGGTTACAAGACCMCCCCCTCCTCCAATCACAAGGCCACCMCC
YCCTCCAATCACGAGGCCACCACCTCCTCCTCTAATCACGAGGCCACCMC
CTCCTCCAATCACAAGMCCACCTCCTCCACCCATTACCAGAGCACCCCCT
CCTCCTATTACAAGGGCACCTCCTCCAAACCTCGAACCTCCTGTCACCCG
TCCNCCTCCTCCACCAATTNCTCGTCCTCCCCCTCCACCCGTTMCTCGAC
CTCCGCCACCACCTTGGCCAGTCACACGACCACCACCTCCTGAGGTTACT
CGTCCTTCCCCACAACCTCGTCCAAACACTAGACCTCCACCACCACGCAC
AACATCGATTGCTCCGAATTATGGTAGTTATGGAGAAAATGAGTATTATA
GTACATATCCTTGTGCTGATTACAAACCTGGAGAAGACGATCTTCAAAAT
TTCGACTTCATAAGAAAATTCCAATTAGATGTTAACCTTGATGGCTATCC
CGGAGTTTCTCGTGTGAGAGGCTCAAATCAGATGCAAACGGCTTATGGAA
TCGATTCGAGTGCAGATCTAAGTATGAGAACAACGTAGGTGTTATACTCC
ATTGTCATCATATTACAAAGATATAACTCTGAAAAATATTTCAGTCGAAC
ATTTAACCAAGGTCTACCCGAGCAATTCAGTTTTGTTACAACATTTAGAG
CTAAAGAACCCATTCAAAATCGTTGGCATTTGATTCGAATTACTGATGGA
TCAGGTAACCCACAATTTGCTGTTGGATTAGACCCAAGACGTAGAACCAT
TGAATTTTCAATCATGAAGTATGACAGGACTCTTCAAACGCTCACATGGA
ATAAGGATGATATATTTGTTCCAGTGGACCAATGGACCAAAGTTCATTTT
GGTGTATTTAGAGATAATGTTTTGTTATACGTAAATTGTGAACCTGTTGG
TGCTCAGCCTCTTGAAGTTGTAGATTCTCGTATTAATTTGAACGGAGAAA
TTTTGATTGCAAAAGATGCAGACTCATCTGCTACTATGCCTGTAGACCTT
CAGTGGATGGNAATGACTTGTGATCCTGATAGTGTAAGACGCGAGACTTG
TGATGAACTACCTGTAAGTATTTAAGACAATGCGAACTATTTTAATAAGA
TTTATGTATTCGATGTTTTATGAATAGCAAAAGGAACAGCCGCAACTTCC
CCAATGTGAAAAAACTTGYCCTGCCGGACCACCAGGATCTCAGGGCCTTC
CAGTAATTTAATAGACTAATAATCTAGGTATTTGTAAAATATTTAAAAAT
TGATTTTTAAAAGGGACGAGGTGGGAGACCAGGAGAAGTTGGAGAAAGAG
GGGCACCGGGTCGACCAGGCAATACTGGTGAAACTGGAAAACAAGGTTTT
CCTGGATTACCTGGTGAAATTGTAAGTACATTAAATTTACTTACATGTTC
TATAAATTGTTTATGAGCGTTTAACTTCTAGGGTAGACCTGGAGTTCAAG
GATCACCTGGTTTGAGAGGTCCATCTGGCCCTGAAGGATTAAAAGGAGAA
ATAGGTCTTCCTGGTCCTCTTGGACCACCTGGAGCTCGTGGAAAAGAAGG
GCCTRGTGGMAAGCCAGGCCCATCAGGAGAGCAAGGACGTCCTGGATTAC
CTGGTCAACAAGGAAAAACTGGTGAACGTGGTCCAGCTGGTGATATAACT
ACTGTTGTTGGACCAGTTGGTCCTCCTGGTCCAAAAGGATCTGAAGGATT
GTCTGTAAGTTTTGAATAGATTTTTAAAATTGGGCTTTCTTCTTACTAAT
ACACTTGAATGTTTAGGGCCTACCAGGATTGGATGGAATTCCAGGAGCTA
AAGGAGAAAGAGGAGAAGAAGGTGAATTGGGTTTATCTGGTAAAGATGGA
AGAGATGGTTCACGAGGGCCAAAAGGAGACATAGGCCAACCTGGTCCTAC
TGGACTACCCGGAAGATCAGGAAGAGATGGTCAGCCAGGGCCCCCAGGAA
TACCTGGAGCTTTAGCTGCTGGAGACAGTGTTCCAGGTGCACCTGGTCCC
AGAGGTCAAGACGGAAATCCTGGTTCTCCAGGTATTCCTGCAGCTAAAGG
AGAGCGTGGAGAACGAGGGGATCAAGGTGAAAGAGGAGATGATGGATCTC
CAGGATTAAGAGGAAAGCCAGGTCCACCTGGTAAAGATGGTACTGTTGGA
GAAAGGGGTCCCCCAGGAGAAGGTGGGGCAAGAGGAGACCCTGGAATACC
GGGCAAAAATGGTCCTCCTGGACCAACTGGTGCTTCGGGAGCAGTCGGAC
AACCTGGTCTTGAAGGGCCTCCAGGACTTCCTGGAGATTCTGGACCCAGT
GGGAGACCTGGTGAGAAGGGAGAAGCTGGGCGCGATGGTAAAGACGGAGA
TGGTGGACAACCTGGTTTACCTGGCCCACCTGGAAATAGAGGGAAATCAG
GAGAAGATGGAATGCCTGGTGTTCAAGGTCTTACCGGTGAAAAAGGACCT
CCTGGTTCTCAGGGATCACCAGGAATGACTGGTCACAAAGGACCTCCAGG
AAAACAAGGGGATACGGTAATTTTATATTATGCGCTGTATTATCATCAAA
GTGCAACAAACATATTTTAGGGATTACCAGGAACTATTGGTCCAAGAGGC
AAAGCTGGACCAACTGGTCCTATTGGAGTAACGGGAAAACCAGGTCCTAG
AGGTGGTCGTGGATTTCCTGGTATTGAAGGACAAACTGGTCTTCCGGGAA
GACAGGGTCCTGTTGGGCCTAGAGGAAAACAAGGGCCACAAGTAATATCA
ATTTGCAGATTAGGTCAACTGTTTATGAATTACCTCACTTTTAACAGGGA
ATACAAGGTAAATCAGGAAATTCTGGGCCACAGGGTCTACCAGGGCTTCC
TGGTCAATCTGGAAAACCCGGCCCTCCAGGTCCTCCAGGACCACCGGGTG
AGACTATTACTGTGATGCCTAATGCTATTAGTAGTAGCAATGGCTCACCT
GGTCCTGAAGGACGGCAAGGGTCTATGGGACCTTCAGGACCTCCTGGGGA
ACGAGGGGCAAGTGGAGAAAGAGGTCCATCAGGTGGTATGGGAATGCCAG
GTATTCCAGGATCACCTGGTTCTCCAGGTATATCAGGACCACCTGGTATT
CAAGGAAGACCAGGGCAGAATGGAAAAGATGGAAGACCAGTAATTAATCT
TGATATTTTTTTTTTAGTATTGAATATATTGAAAAAGTTTTATATTTTTA
GGGACGAGAATATAGTGAAGAAGACTTAAGAGATATATGCGCTTCTGTTC
TTAGAGGTTTATTTTATATCTATTAATTGAAACTTTTTATATTATACTTC
CAATGATTTTAATTTTACAGATCGTTTGTCAGAATTAACTTCTGGATTGA
GAGGACCTCCAGGGCCCCCTGGAAGAGGATACAGAGGTGTTCCAGGAAAG
TCGGGTCCACGAGGTCCTATTGGTGATCCTGGAATACAAGGAGAGCATGG
TCAGAGAGGTTTTCCAGGACTTCCAGGAATGCCTGGACCTTATGGTAGCT
CCGGTCCGAAAGGAGACCGAGGTGATAGGGGAGATCATGGCCCTCCTGGA
ATAGGTGAAAGTGGACCAATGGGACCAAGGGGTAATCCTGGACCTATTGG
TCCCAGAGGAGTAGGCGAACAGGGGCCTATGGGTGAAAGGGGAGCCCCTG
GAAAACGAGGTATTTTTTTTTTATAGCTCAATTTTAAATTTCTAAAATAT
CCCATTAATGACTTAAGGTAAACAAGGAGTGGCTGGTGGACCTGGACCGA
TAGGCCCACCCGGATACTGTGAGTTCTGTGACGTACTTGCTCTTCAATCT
AATAGACAATCTTCAACCAAAAAAGGACCATAA
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