|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s542 | supercontig | LSalAtl2s542:493428..497672 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008733 >EMLSAP00000008733 ID=EMLSAP00000008733|Name=EMLSAP00000008733|organism=Lepeophtheirus salmonis|type=polypeptide|length=944bp
MSDLDNNFEYSSSGYSVQEPIRYFSMSLCDPNIIRLINVGPDLVRLIHER
LQQLVTIETFGYVILAXYIQTNFLGRFNIYDLKLVKNYFQKEGDISKEDM
TIIKVAFCRIFGALFCFGYDMVISTNLAREGTHSTIFFKLRDSQDYFYSL
NYLSHKFICIAPHSTESIILINIPKVSVEEILKIIHLTWSPGIKSKQTLA
DDERSVTVVIALKLCGNPWTQAYYNSGKNTIQARSVILEIVRSLSIHKWR
FAANINYTGNADSLFFQWCPNLDLEDDKYCAIVLSRYDRLRCLQAPQGLQ
QXIKECINKYWYLGLQKTRDYHGVTEFKFGGCPWWSDGNDAVEARFFMST
LMGALKSNAWEVCGTFDLTRHNHDKTTFLLRHCRPQNLSHMCISFCKSNR
IRLIVSSSEISEESELALTTRLNETIKQNWVSLGPRNFGKSIEWKLEGDP
WECEGLYLDQTRCVYLLCLLLESIQPLGWRLIASADVSSKNIDSNDRGYS
LVGKPEDVHTWFFLYDQKLFREDNQYGPKMDLHYHNPYPFSSKFDYMPAS
TSVPNLEYVXKDDSPRTDRCSTSXSNKEKTAQNSKYYNHNSFIKQETNLS
SAAFLQQRHLSRSVPSVACVDQFNENNFFPSGHTLNQFSLNCAEFPLFNS
QEFNFSNQRKIYDQSSNLSLHHDGDNLIWKNNPSHMFQQEHSVANDHRCS
LKKNNFLRQNSAGSLPPSNTTYNYEDGYKSDGETGYRSDIINNKPLYSSI
KHNNENIRRNKINGYKTNNNEEDLVDEEERLKQWNNGYESDGANVTNHNN
VKRIANSGNYGRLSASECIGTNISSLLDGKNNKGENRCMNEKSSLKKKNA
KGSIKNIEGIGTGASSSEELFAIEVRETTVTHSRSKANLLMGTGVNKSEE
DKNRCRNDQKILGNYEPLNESVQFWLFLYLRQMFLRIQKKTLKK back to topmRNA from alignment at LSalAtl2s542:493428..497672- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008733-704580 ID=EMLSAT00000008733-704580|Name=EMLSAT00000008733|organism=Lepeophtheirus salmonis|type=mRNA|length=4245bp|location=Sequence derived from alignment at LSalAtl2s542:493428..497672- (Lepeophtheirus salmonis)
AGTGTATTTAGATATCTTCAAAATGTTCTCTTAAAATTATACAATATGAG
TGATCTTGATAACAATTTTGAATATTCAAGTTCAGGCTATTCTGTTCAAG
AGCCTATACGATATTTTTCAATGTCATTGTGCGACCCAAATATAATTCGT
CTCATTAATGTTGGACCTGATCTTGTTCGCCTAATACATGAACGCTTACA
ACAGTTGGTAACCATAGAAACTTTTGGATATGTTATATTGGCGGRTTATA
TTCAAACAAATTTCCTTGGACGATTCAATATTTATGACCTTAAACTTGTA
AAAAACTACTTTCAAAAGGAAGGTGATATAAGTAAAGAAGATATGACAAT
AATAAAGGTAAGTTTATGAATGACAAAGTAAATAGTATGTCATTACTTAA
TTTATATAACAGGTGGCTTTTTGTCGTATTTTTGGTGCACTGTTTTGCTT
TGGCTATGACATGGTTATATCAACAAATTTAGCTCGCGAGGGAACACATA
GTACTATCTTCTTCAAACTAAGGGATTCACAAGATTATTTTTACTCTTTA
AATTATCTTTCGCATAAATTTATCTGTATTGCTCCACACTCAACTGAAAG
TATTATCCTAATTAATATCCCAAAAGTATCTGTGGAAGAAATATTAAAAG
TAATGATAAGTAAATCACATTATAAGATAAATACATAATTATTTTTTGTT
TTCAAGATAATACATCTTACTTGGAGTCCTGGAATAAAATCTAAACAAAC
ACTTGCAGACGATGAAAGGTCTGTAACTGTAGTTATTGCTCTCAAACTTT
GTGGTAACCCTTGGACTCAAGCCTATTATAATTCTGGAAAAAATACAATT
CAAGCTCGATCCGTTATATTAGAAATTGTTCGCTCTCTTTCAATACATAA
ATGGCGATTTGCTGCAAATATTAACTATACTGGCAATGCAGATTCTCTTT
TTTTTCAATGGTGTCCCAATTTAGACCTTGAGGATGACAAATATTGCGCT
ATAGTACTTTCTCGTTATGATCGGCTACGATGCCTCCAAGCTCCACAAGG
KCTACAGCAGAGKATCAAAGAGTGTATTAATAAATATTGGTATTTAGGCC
TACAGAAAACTAGGGACTATCATGGGGTCACAGAGTTTAAATTTGGAGGA
TGTCCATGGTGGTCGGATGGTAATGATGCTGTAGAAGCACGTTTCTTCAT
GTCAACACTAATGGGAGCACTTAAGTCTAATGCATGGGAAGTTTGTGGCA
CTTTTGATCTGACAAGACATAATCATGATAAGACAACATTTCTTCTCCGT
CATTGTCGACCACAAAATTTATCGCATATGTGTATTAGTTTTTGCAAATC
AAATCGAATTCGATTGATAGTTAGCAGTTCAGAAATAAGTGAGGAATCTG
AATTAGCATTGACAACACGACTAAATGAAACAATTAAGCAAAATTGGGTT
TCACTTGGACCGAGAAATTTCGGTAAAAGTATAGAGTGGAAATTAGAAGG
AGATCCATGGGAATGTGAAGGGCTTTATTTGGATCAGACTCGATGTGTAT
ACTTATTATGTTTATTATTAGAATCTATTCAACCATTAGGATGGAGATTG
ATTGCTTCGGCTGATGTATCCTCAAAAAATATTGATTCAAATGATAGAGG
ATACTCATTAGTTGGAAAACCAGAAGATGTTCACACATGGTTCTTTCTTT
ACGATCAAAAATTATTTCGAGAAGACAATCAATATGGTCCAAAAATGGAT
TTACACTACCATAACCCATATCCTTTTAGTTCAAAGTTTGATTACATGCC
TGCATCTACTTCTGTTCCGAACTTGGAATATGTGCMAAAAGATGATTCTC
CTCGTACTGATCGATGCAGTACTTCASCATCCAATAAAGAAAAAACTGCA
CAAAACTCCAAATATTATAATCACAATAGCTTTATCAAACAAGAAACCAA
TCTCTCTTCCGCTGCATTTCTTCAACAAAGACACCTATCTCGTTCAGTAC
CTTCTGTTGCATGTGTAGATCAATTTAATGAAAATAATTTTTTTCCATCT
GGCCATACACTTAATCAATTCTCTTTAAATTGTGCTGAGTTTCCGTTATT
TAACTCACAAGAGTTCAACTTTTCTAATCAACGAAAAATTTACGATCAAA
GTAGTAACCTCTCCTTACATCATGATGGGGATAATTTAATTTGGAAAAAT
AATCCGTCTCATATGTTCCAACAAGAACACTCTGTTGCGAATGATCATCG
TTGCTCGTTGAAAAAAAACAACTTTTTGCGTCAAAATTCTGCTGGTTCAC
TTCCACCCTCTAATACAACATATAACTATGAAGATGGTTACAAATCAGAT
GGTGAAACAGGTTATCGGTCTGATATAATTAACAATAAACCGTTATACTC
TAGTATTAAACATAATAATGAGAATATAAGAAGAAATAAAATTAATGGGT
ATAAAACAAATAATAATGAAGAAGACCTAGTTGATGAAGAAGAAAGATTA
AAGCAGTGGAATAATGGATATGAAAGTGATGGAGCAAATGTCACCAATCA
TAATAATGTCAAACGAATTGCAAATTCTGGTAATTATGGACGTCTTTCTG
CATCGGAATGTATTGGTACCAATATATCTTCCTTATTAGACGGTAAAAAC
AACAAAGGAGAAAATCGATGTATGAATGAAAAAAGTTCATTGAAAAAAAA
AAATGCTAAAGGTTCAATCAAAAATATAGAGGGAATTGGAACTGGGGCAT
CATCAAGTGAAGAACTTTTTGCAATCGAAGTTCGCGAAACAACCGTAACT
CATTCGAGAAGTAAGGCCAACCTTTTGATGGGAACGGGAGTTAACAAATC
AGAGGAGGATAAGAATCGATGTAGAAATGATCAGAGTATATTACAAAATC
ACAAAATTCCATCTYCMCAGCCAATTCAGCGTCATTATCTAACGGATGGC
TATAGAAGTGAAGGTTCCCGAAGTTCTCSGAGTCATATTATTATACATAA
ACATAGAACGCGTCCTCTTAATTATAATAACCAAGTAAATGTGTGTCACC
ACTTTCATCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATC
ATCATTTTAAACAACAATCCCCATCCATTCAGAATTATCTTAATAGTGGT
AGAAATAATGAATCTTGTTCAACACAGAGTTCATCTTCTTCGGCGTCTGC
ACCACCTGATTATGCGACTTGCAGTGGTATATCACCATCGTATGATACAA
GACTACTTCCAGGATCTTCTACCTCTTGTAATCCTCAAACTCAACACCAG
CATAAGCAAAGAAAAAATAACGAATTATATTACGTCGGAGAATTTTATGG
ATAGCAATCATTAAATCTAAAGAACGTTGGTGAAAATCAATGTTCAACAC
ATGGAATATAATTTTATAAATTTTTCCTAATAGTAGATTCTAAAGATCTT
GCTCAAAAAAAAGTAACAATTTTGCTTTGTATCTATTGATTAATAAGTAC
AACTTATGGATGGCAAAAAAAAAAAATGTTATTACGAACTTCGTTCCGTT
TCTAAATCATTTGTATAGCTGATACGTACTATTTGAATAAAACTTAAAAA
AAATTGAATAATCTGTAATTGATTATATTGGTAATTTTAGGGAAAGTTTC
AAGTTTGTTGGGATAATTTAAAAAAATATATTTCTGCGTATTTTGTTCGA
AGTATTTTGATACATTTTGATTTTCTTTTTTAACTTTGAGGTTATCTTTG
CTTAATGACAGATTACTACAACTGTCATGCGTGTACACTCCATTTATTTC
TAAGAACATAGCATATAATCTTAAAAACTCAACAAAACTTCCTGACAAAA
TAAAGATGTAATGTGATGTAAATATTTTTTGTAAGGAGAGAGAAAATGCA
ACCTTTGTAATTTGAGTTGTCCTAAATATAATAATAGTATTTTCATACCT
GGAAACAAGACACTTTCAAATACAATAAAGTGTATTCAAGTATTACTTGT
CCACTCATGATGTATGTAGTTACCTCCCTTTAAGTTTATGTTCAAAGATT
CTGTTTTCCAATTAGCTTTTTTTTTTAACAATTTAAAGAAATACTTGGAA
ATTATGAGCCCCTCAATGAAAGTGTTCAATTTTGGCTATTTCTATATCTT
CGTCAAATGTTTCTTCGTATTCAGAAGAAAACATTAAAGAAGTGA back to top
|
