EMLSAT00000008759, EMLSAT00000008759-704606 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008759
Unique NameEMLSAT00000008759-704606
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s543supercontigLSalAtl2s543:255906..257703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008759 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008759EMLSAG00000008759-691525Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000038987EMLSAE00000038987-747915Lepeophtheirus salmonisexon
EMLSAE00000038988EMLSAE00000038988-747916Lepeophtheirus salmonisexon
EMLSAE00000038989EMLSAE00000038989-747917Lepeophtheirus salmonisexon
EMLSAE00000038990EMLSAE00000038990-747918Lepeophtheirus salmonisexon
EMLSAE00000038991EMLSAE00000038991-747919Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775399auto775399Lepeophtheirus salmonispolypeptide
EMLSAP00000008759EMLSAP00000008759Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008759

>EMLSAP00000008759 ID=EMLSAP00000008759|Name=EMLSAP00000008759|organism=Lepeophtheirus salmonis|type=polypeptide|length=337bp
MPLIIITGIPSSGKTTTAHKLRDFFEGEKGKKVMIVSELNEQTPQRNDIY
KDSAVEKTVRSAFKSEILRILNKEDIIIADGSNYIKGFRYELYCATKSYK
TPQITVHCDVSPSDTKEFNASKESEDSKYSEEIIDALVMRYEAPIYYNRW
ENPLFLSIKGRXLPLEDMXXALYERXPPPPNQSTQCQPLSDTNFVYELDR
VTRXENPLFLSIQGRDLPLEDMYSALYERKPPPPNQSTQCQPLSDTNFVY
ELDRVTREINNSIMQFLRNSGTGEFKITSSSEVKIKITRNVNLPELNRTK
RQFVSYSKSRAIDDVNKLTNMYIQYVNNTLFLVEDTS
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mRNA from alignment at LSalAtl2s543:255906..257703+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008759-704606 ID=EMLSAT00000008759-704606|Name=EMLSAT00000008759|organism=Lepeophtheirus salmonis|type=mRNA|length=1798bp|location=Sequence derived from alignment at LSalAtl2s543:255906..257703+ (Lepeophtheirus salmonis)
ACTGACCTTGGTAATTCAGTTAAACGGGTAAGCTCATGCCTGTGTTTTTA ATTATGGAGTAATATTCAATGCTCCTCGTGTACAAAAAAAGTTTCGCTAA AGACGATACTTTTTGTACAAATATTAATCACGTGGTCTTCGTGTCGCTAC TTGATTATTTTAAAGCTTTAAGTAATTTTGCCTAACACATATTAGGTATA TTAAATTTAATGATTTAAAGTCTATATTACAATTCATTGGCTAMTCCTTG TTGCTCACTAGGTTTATAACTTACATATTAGTAGTGTTATACAATTATAA TTACTTAATATTTTGTGTGAGCTCCAGTTGTCAAGTAAATTTACTTTCAT TTACTGTCACATGACCTCTTTCTCCCAACTTCCAGTTAGTAATAATAAAT AAACATGAAATTGATCAACAAATGACGATAATATTTTCCACTATTTCATT TTAATCCATTTGTTCTTGATCTTTTGATAGATCGAGGATTCGTCATTTAT ACAGCATGCCTTTGATTATCATCACTGGGATTCCATCTAGTGGAAAGACG ACCACGGCTCATAAATTGAGAGACTTTTTTGAGGGGGAAAAAGGAAAGAA GGTGATGATCGTCTCGGAGCTGAATGAACAAACTCCGCAGCGGAATGATA TCTACAAGTATAATTCCCATAGCTCCCCCTTCTAATATCCACTTCTATTC AATATACAGTATACACCCTTCCCATTTGTAGGGACTCTGCTGTGGAGAAA ACAGTTCGAAGCGCGTTCAAGTCTGAGATCCTTCGCATCTTGAATAAAGA GGATATCATCATTGCAGATGGTTCCAATTACATTAAAGGCTTTCGCTATG AGCTCTACTGTGCCACAAAGTCTTATAAAACACCGCAAATCACTGTCCAC TGTGACGTTAGTCCAAGTGACACCAAGGAATTTAACGCAAGTAAAGAGTC AGAGGATTCAAAATATTCTGAAGAGATTATTGATGCGCTAGTCATGCGAT ATGAGGCTCCTATCTATTATAACAGGTGGGAGAATCCACTCTTCCTCTCT ATCAAGGGTAAAAAAAAATAGCGTCATTCATTCTAGAGTGGGATTCATTT ATTACTTATCTTTGCTCTAGGAAGAGMCCTTCCACTTGAAGATATGTMCY CCGCTCTCTACGAAAGGAAMCCTCCTCCACCTAATCAATCCACTCAGTGC CAACCTTTGTCGGATACAAATTTTGTATATGAGCTCGATCGCGTTACGAG GGNGGAGAATCCACTCTTCCTCTCTATACAGGGTAAAAAAAAATAAGACG TCATTCATTCTAGAGTGGGATTCATTTATTACTTATCTTTGCTCTAGGAA GAGACCTTCCACTTGAAGATATGTACTCCGCTCTCTACGAAAGGAAACCT CCTCCACCTAATCAATCCACTCAGTGCCAACCTTTGTCGGATACAAATTT TGTATATGAGCTCGATCGCGTTACGAGGGAAATTAACAATTCCATTATGC AATTTTTGCGAAATTCGGGAACGGGAGAGTTTAAAATCACCTCAAGTTCT GAAGTGAAAATAAAAATAACGAGGAACGTTAATTTACCAGAGCTCAATCG CACTAAGCGTCAATTTGTTAGTTATTCAAAGTCTAGAGCCATCGATGATG TCAATAAGTTAACTAATATGTACATTCAGTATGTCAATAACACGTTATTC TTAGTCGAGGATACTTCGTAATTGACAATATCATATCCGTTCGTAAAATA TTTTTTTAATATAATAAATCTATACAATTTTTTTTAAATGTTTACCCC
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