EMLSAT00000008771, EMLSAT00000008771-704618 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008771
Unique NameEMLSAT00000008771-704618
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s543supercontigLSalAtl2s543:278415..278995 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008771 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008771EMLSAG00000008771-691537Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039031EMLSAE00000039031-747959Lepeophtheirus salmonisexon
EMLSAE00000039032EMLSAE00000039032-747960Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775732auto775732Lepeophtheirus salmonispolypeptide
EMLSAP00000008771EMLSAP00000008771Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008771

>EMLSAP00000008771 ID=EMLSAP00000008771|Name=EMLSAP00000008771|organism=Lepeophtheirus salmonis|type=polypeptide|length=170bp
MEIQASLNSNFVSCDLPDKSDGLDIDASSDSNFILCDPQDKSDKLDTEAS
SSSNLIAVDHPKKPMGLEIQRSIDISSDKYNEYVQALDYEIECYYHRLKS
KKGCEKCGYTCPNPSKMRIQIEGRHIITKRFFCKLCCKTYKTRNSLRCHN
YYKHKNGYMLKRLGLTRKKS
back to top

mRNA from alignment at LSalAtl2s543:278415..278995-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008771-704618 ID=EMLSAT00000008771-704618|Name=EMLSAT00000008771|organism=Lepeophtheirus salmonis|type=mRNA|length=581bp|location=Sequence derived from alignment at LSalAtl2s543:278415..278995- (Lepeophtheirus salmonis)
ATGGAAATCCAGGCGTCTTTAAATTCAAACTTTGTTTCATGTGATCTTCC
AGATAAATCGGATGGATTAGACATAGATGCATCTTCAGATTCAAACTTTA
TTTTGTGCGATCCTCAAGATAAATCGGATAAATTGGACACTGAGGCATCT
TCAAGTTCAAACTTGATCGCAGTTGATCACCCGAAAAAACCTATGGGATT
GGAAATCCAAAGATCAATCGACATTTCATCAGATAAATACAATGGTTTGT
ATAGTCTACATTTAGTATTTCCATGTAATTAGGCTACCCATTTATTATTT
TTTCAATTTCAGAGTATGTTCAAGCATTAGATTATGAGATTGAGTGCTAC
TACCATAGGTTAAAGTCGAAAAAGGGATGTGAAAAGTGTGGTTATACTTG
TCCAAATCCTAGTAAAATGCGTATTCAAATTGAAGGCAGACATATAATTA
CGAAACGGTTTTTCTGCAAACTCTGTTGCAAAACTTACAAAACAAGAAAT
TCCTTAAGATGTCATAATTATTATAAACATAAAAACGGATATATGCTCAA
GCGCTTGGGTCTAACTAGAAAAAAGTCTTAA
back to top
Add to Basket