EMLSAT00000008813, EMLSAT00000008813-704660 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008813
Unique NameEMLSAT00000008813-704660
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s549supercontigLSalAtl2s549:453537..455976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008813 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008813EMLSAG00000008813-691579Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039175EMLSAE00000039175-748103Lepeophtheirus salmonisexon
EMLSAE00000039176EMLSAE00000039176-748104Lepeophtheirus salmonisexon
EMLSAE00000039177EMLSAE00000039177-748105Lepeophtheirus salmonisexon
EMLSAE00000039178EMLSAE00000039178-748106Lepeophtheirus salmonisexon
EMLSAE00000039179EMLSAE00000039179-748107Lepeophtheirus salmonisexon
EMLSAE00000039180EMLSAE00000039180-748108Lepeophtheirus salmonisexon
EMLSAE00000039181EMLSAE00000039181-748109Lepeophtheirus salmonisexon
EMLSAE00000039182EMLSAE00000039182-748110Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777821auto777821Lepeophtheirus salmonispolypeptide
EMLSAP00000008813EMLSAP00000008813Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008813

>EMLSAP00000008813 ID=EMLSAP00000008813|Name=EMLSAP00000008813|organism=Lepeophtheirus salmonis|type=polypeptide|length=434bp
MNCCGSEALVEKSFFSILIAVLDELKSVPKANPILIITTSTCLFFGMVGI
LWTLRRSSSSWIKRQSKDLYVKKAQREIKLCLKYINDKSWNRVMECGGAP
GAWTQVLTDKIHSGLIISCDLLDYEPLQGAIILPRSDFTHPKTKEVILSH
LKGGKLDMVLSDMAPNASGQSEINHQKILELSYEVTKFALSHSTPGACML
TKLWDGYGTKRFIEDLKRFYVDVCVVKPKSSRKESNVIDKVASEFGTLDF
LVNNGGGQFPSLAADMSLKGWNAVIETNLNGTYLMSREAYNQVFKKSGGS
IVNIIAQTSRGFPMMAHTGAARAAVENLTKTLALEWSENGIRVNCVAPGP
VFSKTASDNYSYDLFSSLTPKLPTKRCGTPDEVSSTVCFLLSPGASFVNG
ATLVVDGGSVLYSPPMYSIPDHNKQPPYSWENED
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mRNA from alignment at LSalAtl2s549:453537..455976-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008813-704660 ID=EMLSAT00000008813-704660|Name=EMLSAT00000008813|organism=Lepeophtheirus salmonis|type=mRNA|length=2440bp|location=Sequence derived from alignment at LSalAtl2s549:453537..455976- (Lepeophtheirus salmonis)
ATGAACTGTTGTGGCTCAGAAGCTCTAGTAGAAAAGAGTTTCTTCTCTAT
TTTAATTGCAGTTCTTGATGAATTGAAAAGTGTTCCTAAGGCGAATCCTA
TCCTAATGTAAAAACTATCTTTTCACATTTTCCATTTCTGGAGTCATCAA
ACCCTTTATAATTTATATTCATAGTATAACAACGTCAACGTGTCTATTCT
TTGGAATGGTTGGAATATTATGGACTCTCCGTCGGAGTAGTTCATCCTGG
ATTAAGCGACAATCTAAGGATCTATATGTCAAAAAAGCTCAAAGGGAAAT
TAAATTATGTTTAAAATATATTAATGATAAATCATGGAATAGAGTAGTTC
CTATTGACTTCTTCTCCATTCTATTATTATTCKCCACWAAAGTTATACMT
AGCCATTAAGCCTAAAAAGACCCTCTATCCATGATTTATAAAATATATTT
AACATTTTAGGGAAGGATACAGAGCTAGAAGTGCCTATAAACTAATTGAA
ATCAATAACAAATTCAACTTTATCCATCCAAAAATGAAGGTAATGGAATG
CGGAGGTGCTCCAGGAGCATGGACACAAGTTCTAACAGACAAAATACATT
CTGGCCTCATTATTTCTTGTGACTTATTAGACTATGAGCCCCTTCAAGGT
GCAATTATTCTACCCAGATCAGACTTTACACATCCCAAAACAAAAGAAGT
TATACTTAGTCACTTGAAGGGTGGCAAATTAGATATGGTTCTCTCTGACA
TGGCTCCTAATGCCTCGGGTCAGTCAGAGATTAATCATCAGAAAATTTTG
GAATTGAGCTATGAAGTTACAAAGTTTGCGTTGAGCCATTCTACTCCTGG
TGCTTGCATGTTGACTAAATTATGGGACGGATATGGAACAAAACGTTTCA
TTGAGGATTTAAAACGATTTTATGTGGATGTATGTGTTGTAAAACCAAAG
TCCTCCAGAAAGGAATCGTCAGAGATTTATGTTTATGCTTCAAGATTCAA
AGGATTAGCTTGAATTGTCTCTGATTTCTTAATAAAGAATGATTAAAATA
TATATAAAATGATATAAATATAAAATATGATGTTCAATCTCAGACATTTA
TATCATTTTTTTAGAATGTCAATATTTCGACCAGGGCTCTTTAATGGAAA
AGTGGCACTAGTTACTGGTGGAGGAACAGGAATTGGGAAGTCCATAACAA
GGGAGTTGCTTTCCCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTTTAATGGCGTTTWATGTGTTTACTCA
TATACTATATCTTAATATTGTCTCAAGGTRGTAACGTTGCTATAGCATCC
CGAAATATAGATAAATTAAATAAAACTTGTCAAGAATTTTCTAATAAGTT
TCCTGGKAAAATACAAACATATGTCTGTAATATTCGCATGGAAAGCGACG
CCAAGTATGCTATTGTTATAAATAATTCTCACTTTCATTGCAAAATAATT
ACTCATAATTATTCATTCAGAAATGTCATTGATAAGGTTGCATCGGAATT
TGGAACTTTGGATTTCCTTGTCAATAATGGTGGGGGTCAGTTCCCTTCTC
TTGCTGCTGATATGTCTCTGAAAGGATGGAATGCTGTTATAGAAACGAAT
TTGAATGGAACATATCTAATGTCGCGAGAAGGTACTTTCGTAATTAACCT
CTGAATTAAATTATTGTTTTTATATCATTATTATTATTAAAGCATATAAT
CAAGTATTTAAAAAGTCTGGAGGTTCAATCGTTAATATCATTGCACAGAC
CTCTCGTGGGTTCCCGATGATGGCTCATACAGGAGCTGCAAGGGCTGCAG
TTGAAAATTTAACAAAGTAAGATCGATTGTGGATACAAAGTAAATTATAT
AAATCTTTCTGCTGTTAGAACACTCGCATTGGAGTGGAGTGAAAATGGAA
TAAGGGTCAATTGTGTTGCGCCGGGTCCTGTTTTTTCTAAGACTGCTAGT
GACAATTATTCTTATGATTTATTCTCATCACTAACGCCTAAGTTACCTAC
TAAAAGATGTGGTACTCCTGATGAGGTAATCAATACTAATATCAATCTTA
ATTAATATTTATAGATTGTTATATTTTTCTTTTCTCATTAGGTATCAAGT
ACCGTTTGCTTTCTATTATCTCCTGGTGCTTCATTTGTCAATGGAGCTAC
TTTGGTAGTTGATGGTGGAAGTGTACTATACTCTCCTCCGATGTACTCAA
TACCCGGTATTATTTTATTTGAATTTAAAAAAAAAATTATTATATCATTT
GATATTTTCTAAGCAAGAAAAATTAATTCGTTTTCATGTATTGCAGATCA
TAACAAGCAACCTCCTTACTCCTGGGAAAACGAAGATTAA
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