EMLSAT00000008881, EMLSAT00000008881-704728 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000008881
Unique Name	EMLSAT00000008881-704728
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s554	supercontig	LSalAtl2s554:350927..355999 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000008881 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000008881	EMLSAG00000008881-691647	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000039488	EMLSAE00000039488-748416	Lepeophtheirus salmonis	exon
EMLSAE00000039489	EMLSAE00000039489-748417	Lepeophtheirus salmonis	exon
EMLSAE00000039490	EMLSAE00000039490-748418	Lepeophtheirus salmonis	exon
EMLSAE00000039491	EMLSAE00000039491-748419	Lepeophtheirus salmonis	exon
EMLSAE00000039492	EMLSAE00000039492-748420	Lepeophtheirus salmonis	exon
EMLSAE00000039493	EMLSAE00000039493-748421	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776749	auto776749	Lepeophtheirus salmonis	polypeptide
EMLSAP00000008881	EMLSAP00000008881	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s554:350927..355999+

protein sequence of EMLSAP00000008881

>EMLSAP00000008881 ID=EMLSAP00000008881|Name=EMLSAP00000008881|organism=Lepeophtheirus salmonis|type=polypeptide|length=334bp
MKSQSILLLSVIISTASAVSFFDVVLSDWESWKLTHQKGYDSSVEEKLRL
KIFMENSLRISRHNAEAIQGRHTYFMKMNHYGDLLHHEFVAMVNGYIYNN
KTTLGGTFIPSKNINLPEHVDWREEGAVTPVKNQGQCGSCWSFSATGSLE
GQDFRKTGKLISLSEQNLVDCSRKYGNNGXEGGLMXYAFKYIQDNNGIDT
EASYPYEGIDGHCHYDPKNKGGSDIGFVDIKKGSEKDLQKALATVGPISV
AIDASHMSFQFYSHGVYSEKKCSPENLDHGVLAVGYGTDEVNGEDYWLXK
NSWSEKWGEDGYIKMARNKDNMCGIASSASYPVV

mRNA from alignment at LSalAtl2s554:350927..355999+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000008881-704728 ID=EMLSAT00000008881-704728|Name=EMLSAT00000008881|organism=Lepeophtheirus salmonis|type=mRNA|length=5073bp|location=Sequence derived from alignment at LSalAtl2s554:350927..355999+ (Lepeophtheirus salmonis)
AAAACATCACAGGATGCTAGTTGAAATTCAATATCCAAAATGGTGAGAGA
GCACTCTTTGGAGACCAGGCCCAAGGCTGTTGGCATGATAGAGGGTGGAT
CAAGCCAGAGAGACATACCTAAATGGTTACAGATTCCTCTCAGGACGATT
GATAATTGGTGTAAGAAAAGGAAGGATGGACAAACCCTTGCAAATCAGAA
GGGTCGAGGAAGAAAGAAAAAAATTAGCAAAGTTCTCAAACTGGTGATTT
CAAAATCTTTGACCAAAAAGAGGCAATCCACTAGGAAACTTGCAGCAAGA
TTGACTTCAAAGGGCTATCCACTTTCCAAGTCATCTGTCCACAACTACTT
GAGGCACTCTTTGAATGCTTTGCCATAAAAACCTCGTCTGGAAGCCAAAC
TTTCAGAAAACCAAAGGAAGGCCCGGCTTCAATTCTGTCGTGAATTCAAA
CAACATGAAAGCCCATATATTTTTTTTTGGTATTTCTCTGCTAAGAAATT
GCATTCCTGAAATCTGCACAGTAAATTATTCATTCAAAAGTTCTGAAGCC
CTTATAGCAAGTCGACTTACTACTGAAAATGAACTACGATTTGTGGAAAT
TAGGAATGTAATTATTGCATCTGTAGCGATATATACCGCTTTTCCCTTGC
GTATTAACAGGGGAAATCCCTTGAATTGGGACTTTGCCTCAGATTTGGTT
TGATATTTTCCTTCTTGGTCGGTTAGATATTATTATTATGAACGTTCTTT
AAATCTAGTTTTTTAATTGTGTATGTTACTCGGTTCTATGTGCATTTTTG
ATTTTGGAAAGAAATTAATCATTAGCTGTTTATTTTAGTTCTCTCACTGT
TTAAATATTCTTTATGAAAATTGTTTTTGGGTGTTTTATGTTTCAAGGAG
AATAAACATATGGGATGGTGGCTATAAGTGAGGGATATTATTTTAAACGA
GAATGTTTATTTATTATTTTTGCATTTCTTCTTAATTTATTTTTTCCATG
ATGTTAAATATGTTTGATATATATTTTTGTGGTATAAAGCCCATAAAAAA
ATGGGAGCCTCCTCAAAAGGTGGCTAGCGACTCCACTCATTGGAAAAGTA
GCTTAAAAAACATGAAATTATTCGTCATTAAATGTTTTTTCATTTGAATT
TTTATAATTGATGACTTAAAATCCAGGAAAACAAAAAAAAATTATTGAAT
AGCTATTTGTATGTTCCACAAACAGATGTGGGGAGGAAATGTTGTTTATG
TTAAAATACAAAGTCAATGCCTGACATTTGATACCCCCTATTACATATTT
ACTATGTAAAGCAAGTTTAGCCCCTCACCATTCTTGTAGCTGAGAGGATA
TCCTTGATTAATGCTGTTTTTTTCGGCATGGATTTCATGAATAAATGTAT
TAAATATAATTAATAAGTTTTTCTGCCGCCTTATCAGTGACTTGCTCATA
TTCAACAAAGGATTAAATTTATGTATTCTATAACATGAATGAAATTTGAA
TATATTATATATCCTTTAAAGGAGGAACTATCCTACCCTAATATTTGCTC
CTGATAAACTTTTTTGCCAAGAGGTTACATCCTRCAGCCATATCACATAT
GTATCTCATTATTAGTTAACGCATGAAGACAAAAAAAAGCTGTATGATAA
GATAAATCAATTTAAATCATTCACAAACGACCGGTTTTCCTATAAAAGTC
TCGTCATTCTAATGAAGAAGTACAATCAGTTTGTGGAAGCGTAATTGGTA
AGGAAAACTTTGCATTGATTGAGTGATTTGAGGAATCTGAGAATTTCCGG
GTGTATGTCTTGTGAAAAATTTCTGAGAAAGTAACAACATATAAGAACAG
GGGTCCACTAGTAGCTTGTGCTCGAGGATTTTGTACCTGTTTATTTTCAA
GAAATTTATCACTTATTATATTATGTAAATAAGAAACTATAAAATAAAAA
AATAGTGTAGTATTATTCCTTAGTTTGATACAATAGTAAAAAAAATAAAT
ATTTATATTTAGGTACATATTCAATTGAGAAATTATTGTATCCAAACTCA
AATATTTTTATCACATCTTCACTCACTCGGAAAAACCCGATTTCTTTGTT
AAATTTGAATAAGTGCGCATTAGGTTTTTTTTTTGTTTTTTTAAGATTTT
CATGTATTCTTTCAACCCTACAAAAGTTTCTTTCTTCCTTCCTTCACAGT
TTTAATTGAGAAGAGCTAGAAGAATGAAGTCCCAGAGTATCTTATTACTC
TCCGTTATAATTTCGACTGCATCGGCTGTGAGCTTTTTTGATGTAGTTCT
GTCAGACTGGGAGTCATGGAAATTGACCCATCAAAAAGGCTATGATAGCT
CTGTGGAAGAGAAATTACGATTGAAGATCTTTATGGAGAATTCCCTCAGG
ATCTCCAGACACAATGCTGAAGCCATCCAAGGCAGACACACGTACTTCAT
GAAAATGAACCATTATGGGGATTTGGTAAACTAAAACTATTATTTTTTCG
AAAGGAAATATATATTTAAAATAATTTCTTTGGATTTAGCTACATCATGA
ATTTGTAGCAATGGTCAATGGTTACATCTACAACAACAAAACAACCTTGG
GTGGGACCTTCATTCCCAGCAAAAATATAAATCTCCCTGAACATGTTGAT
TGGAGAGAAGAAGGTGCTGTGACGCCTGTCAAGAATCAGGGTCAATGTGG
ATCCTGTTGGTCATTCTCCGCTGTAAGAATCATATTACCAAGCTATAATT
TAATACTTATTTTTAACCATATTAATTAGACGGGTTCATTGGAGGGCCAA
GACTTTCGCAAAACTGGGAAATTGATTTCGCTCAGTGAGCAAAATTTAGT
GGATTGCTCTCGAAAGTACGGAAACAATGGCTGNGAAGGAGGMTTGATGG
YCTATGCCTTCAAGTATATTCAAGACAACAATGGCATTGACACTGAGGCG
TCTTACCCTTACGAGGGCATTGATGGCCATTGCCACTATGATCCCAAGAA
CAAGGGTGGCTCTGACATTGGATTTGTAGATATTAAGAAGGGATCTGAGA
AGGATCTTCAAAAGGCACTTGCCACCGTTGGACCCATCTCCGTCGCCATT
GATGCTTCTCATATGTCATTCCAATTCTATTCACACGGTAAGTCTCTATT
TCTACGTAAGTGTTGGAGACTAGGAATATAATCATACTCATCTTGTTATT
TAGGAGTTTACAGTGAAAAGAAATGTAGTCCTGAGAATCTGGATCATGGT
GTTTTGGCCGTAGGATATGGAACAGATGAAGTGAATGGAGAGGACTATTG
GTTGGMAAAGAATTCATGGAGTGAGAAGTGGGGAGAGGATGGATATATTA
AAATGGCTAGAAATAAGGATAACATGTGTGGAATTGCTTCCTCTGCCTCT
TATCCCGTCGTTTAGTCAATTCTAAATTATTGTTATTAATTATTACTTAT
TTTGTTCGTAGAAAATAAATTTCTGAGGAAATACTGTTCATATTCATTTT
TAATATATATAATAATAATAATACACCACTATTTAAAAACACGAGTCTTT
CACTCATTCATTCTATATGTACATCATACATAATTAATAGTGTAACAACA
ACGTCTTTTAATTCGTTATAAATTGTAAATGAACAAAATCATTAATTATG
AGAGTTCGATATCCAGACTATCACAGTGAAGTTCATCTTCCTCATCGTGA
GCTAGAAGAGGGCGTTCCACACTATTGGGCGGGGCCTCAGGCTCAACAAA
AGGCTCTGGAACCCGATCACAAAATTCCTCAGGGGACTCCTCAGACTTTA
TAATATTCCTGAAGTCCTCACTCAATTTTCGAAATTCTTTGAGCTCCACT
AGAAAGTTTTTCTTTACTTTTTGAACCGGTGGTATTCTAGAGGAGACATT
GAAGAGTTGCTTGATGGCTTTTTGATTAATCTCTGCCTCTTTGGATTCTC
TCAGGAGTTGTAAGAAAAGKCCTCCAGGCGTCCTTCTTCTSGAGCCGTTC
TTAATCATTTTCCCTCCGTTCTTCTCAATGTCCTGTGTTTCTTTAAAGAG
TTTTAAGGAGTGAGGAATGCCAATGATTTCAAGAACTCCGGTGATGAGCT
CCGTCTTGGGCTCACACAACTTCGCTGCAAGCTCCTCCGCAATTTCGTTA
ATGGAGCCCTTTTCAATTAGACTTGCACTTAATTCAGGGATGATACGAGG
AATCCCCGGAGGTGGAATGGACAAGTTATCCAGGGCTGGCTCTTGAAATG
GTTGGATAGGACCCAGGCGGTCTTTAATAGAGCGCTTTCTCCCAGGAACA
GATTTGTTTTTATTAAAGTAGACATCGAGATCCCGATTTAATTTGGTTTC
TTCTGCCAATGAGTAGTCATAGGTCTCTGCTCCTCGGTCTGAAAAGGAAG
CGGATTTCTTTTTCTTGGATACGCCAATGGATGAGAGATCCGTGGTAAGA
GATTCTTCTTGGAGAATGGAACCCCAAACATTATTTTTCTTCTTTCGGTT
TGTTTGGAATTGACGAGTTAGGTGATTAAATAGAGCTCCTCCTCCAGCAG
GAGACTCAGGAGGGTCCTTGAGGACAGATGAGTTGTAATTCATGGTATAA
GGCCGTTTCGAGGGAGTTTCCGAGTCAGATGAATCCTCATCTTGAAGATC
TTCCTCCTCTGAAGACACTTCTTCTTTAGTAGAAGGGTAATTTGAGCTTC
GAGACTGGAGACTGGTGTGGGGTAAGGGTCGAGGTAGAGGAACATACACT
TTAGCTGTCTCGTCACCCTCTTCTCCGCCAGAGCTTAATTCTCCATCTTC
GAACTCCACCTCTTCGGTACTATCCATTGCAAAAGGGTATCTGGAGAGTA
TTTAATTAGTATGTATCCCTGTCGTGTGATTCAAGAGGACCTGAACAACT
TAAACTAATGCTATCAATTCACAATTAATCAGGAATTATTATTCATCCAG
TATCAACTCAAGCTATCTAGATTAAAAAATGAAGTCATTATCCGGCCCAT
AGACGTATATCAATGTAACTTGTATAATAATAAAAAGCTAGACATAGAAG
AACAATTAGCTTTTTTATGCACT

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