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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s554 | supercontig | LSalAtl2s554:55021..61089 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008901 >EMLSAP00000008901 ID=EMLSAP00000008901|Name=EMLSAP00000008901|organism=Lepeophtheirus salmonis|type=polypeptide|length=1963bp
MSSIITGDSKAPVKLVKRIQFGILSPEEIRRMSVTEGGIRFPETYEGGRP
KLGGLMDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCAGTMTECPGHFGHLELAKXVFHPGFLTKTIKVLRCVCFYCSKLL
VSPTHPKIKEIVMKSKGQPRKRMSHVYDLCKGKNICEGGDEMDTTNPAEG
SKSHGGCGRYQPTIRRVGLELTAEWKHKNEDSQEKKVPLIGEKVHEIFKN
ITDEECYILGMDPKFARPDWMIVSVXPVPPLCVRPAVVMFGSARNQDDLT
HKLADIIKANNELIRNEQAGAAAHIISENIRMLQFHVATFTDNDMPGLPK
AMQKSGRPLKAVKARLKGKEGRIRGNLMGKRVDFSARTVITPDPNLRIDQ
VGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIIRDTGERI
DLRYHPKSSDLHLQCGYKVERHIRDGDLVVFNRQPSLHKMSMMGHKVKVL
PWSTFRMNLSDTSPYNADFDGDEMNLHVPQSMETRAEILNIHLTPRQIIT
PQAXKPVMGIVQDTLTAVRKMTKRDVFLSKEEMMTLVMFLPTWDGKLPIP
AIIKPKPLWTGKQLITLIIPGNTNCMRLHATHPDEETNGPYHWISPGDTR
VLIEHGELVMGILCKKSLGTAAGSLLHVSQLENGHEINGRFYGNIQTVVN
NWLLLEGHSIGIGDTIADPQTYQDIINTIRKAKDEVTEVIQKAHSDELEA
TPGNTLRQTFENKVNRILNDARDKTGGSAKRSLTEFNNFKVMVVAGSKGS
DINVSQVIACVGQQNVEGKRIPFGFIKRTLPHFIKDDYGPESRGFVENSY
LAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVCYDG
TVRNAVGQLIQLIYGEDGLAGEXXEFQTLKTISLSNHTFEKKFKFDPTNE
RYVRKLFTDDVLREMVGSPEVVAEIEREWTQLCKDREALRQIFPTGKKNV
VLPCNLERMIWNAQKIFHINKRAPTDLSPLKVITGVRELVKRCVIVRGLD
KLSTQANDNATTLFQCLVRSTLCTKLVSETHRLSEEAFEWLLGEIESKFF
YAQSTPGEMVGAMAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEI
INISKKPKAPSLTVFLTGSAARDAEKAKNVLCRLEHTTLKKVTANTAIYY
DPDPQNTFIAEDQEFVNVYYEMPDFDQSRISPWLLRIELDRKRMTDKKLT
MEQISEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDSKDTDEEQADK
MEDDMFLRCIEANMLSDMTLQGLEAISKVYMHLPSTDDKKRMIITEQTGE
FKSIAEWLLETDGTALMRVLSERDVDSIRTTSNDICEIFSALGIEAVRKS
VEKEIFTVFNFYGIYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGAL
MRCSFEETVDVLMDAASHAEVDPMKGISENIILGQLPRMGTASFDLLLDA
EKCKYGIEIPMNAAGGMMGGPGLFFGSAASPSASMTPGMTPWAAGATPGY
VSAWXPPGSGMTPGGPGFSPSGQSDASGLSPRYSSWSPQPNSPGSPAMSP
YIASPGGMSPSLSPSSPTYAPMSPSLASPTSPGYSPTSGYNVTSPGYSPT
SAYNMSSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPGYSPTSPSYNAASPSXSPASPSYSPSSPQYSPKSPGH
SPQSPSYSPSSPKYSPTSPSYSPTSPNXSPSSPSYSPTSPNYSPTSPTYS
PSSPKYSPSSPKYSPTSPQYSPTSPTSPGYSPTSPQYSPTGNQXSPTSPT
YSPTSPTYSPSSPNYSTSSPTYMPSSPFSPAYSPSYAPTSPTYDVEEDSN
EDKNKKKKKKSSK back to topmRNA from alignment at LSalAtl2s554:55021..61089- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008901-704748 ID=EMLSAT00000008901-704748|Name=EMLSAT00000008901|organism=Lepeophtheirus salmonis|type=mRNA|length=6069bp|location=Sequence derived from alignment at LSalAtl2s554:55021..61089- (Lepeophtheirus salmonis)
ATGTCGTCGATCATAACTGGGGACTCGAAGGCCCCAGTGAAACTCGTGAA
GAGGATTCAATTTGGTATTCTGAGTCCTGAAGAGATTCGTCGTATGAGTG
TAACGGAGGGAGGAATCCGTTTTCCTGAGACTTATGAGGGTGGGAGACCC
AAATTGGGGGGTCTGATGGATCCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCTGTGCTGGAACCATGACGGAGTGTCCGGGACATTT
TGGGCATTTGGAGTTGGCCAAGKCCGTGTTTCATCCCGGATTTTTGACGA
AAACCATAAAAGTGCTTCGATGCGTGTGTTTCTACTGCTCCAAACTCCTG
GTCTCGCCCACACATCCCAAAATCAAGGAGATTGTGATGAAGAGCAAGGG
ACAGCCTCGGAAAAGGATGTCTCACGTCTACGACCTGTGCAAAGGCAAGA
ATATCTGCGAAGGCGGCGATGAAATGGACACGACGAACCCAGCGGAAGGG
AGTAAATCCCATGGAGGCTGTGGACGCTACCAACCCACGATTCGCCGTGT
TGGCCTTGAACTCACTGCGGAGTGGAAGCACAAGAATGAGGACTCGCAAG
AAAAGAAAGTGCCGCTCATTGGAGAAAAGGTGCATGAGATCTTCAAGAAC
ATAACGGATGAGGAATGCTATATCCTTGGAATGGATCCCAAGTTTGCTCG
TCCTGATTGGATGATCGTCTCCGTTTTKCCTGTKCCTCCACTCTGTGTGC
GACCTGCTGTAGTCATGTTTGGCTCTGCACGTAATCAGGACGATTTAACT
CACAAGTTAGCTGATATTATCAAGGCCAACAATGAACTTATTCGGAATGA
ACAGGCTGGAGCTGCTGCTCATATCATTTCAGAAAATATTCGTATGTTAC
AATTCCATGTTGCTACCTTCACTGATAACGATATGCCTGGTCTACCCAAA
GCTATGCAAAAGTCGGGTCGTCCACTCAAAGCTGTTAAGGCTCGGCTCAA
GGGCAAGGAGGGTCGTATTCGAGGTAACTTGATGGGGAAGCGAGTAGATT
TCTCTGCACGTACTGTAATTACACCAGATCCCAACTTACGAATTGATCAA
GTTGGTGTGCCTCGTTCCATTGCTCAAAATCTAACCTTTCCCGAAATTGT
GACGCCCTTCAATATCGACAAAATGCAAGAGCTTGTAAGAAGAGGTAACT
CTCAGTACCCTGGTGCTAAATATATCATCCGTGATACGGGAGAACGTATC
GATTTACGTTACCATCCCAAGTCATCTGATCTTCATCTACAGTGTGGATA
TAAAGTTGAAAGACACATTCGTGACGGAGATTTGGTTGTCTTTAATCGAC
AGCCCTCACTTCATAAAATGAGTATGATGGGACACAAGGTTAAGGTTCTT
CCTTGGTCTACATTCAGAATGAATTTGAGTGATACCTCACCCTACAATGC
AGATTTTGACGGGGATGAGATGAATTTACACGTACCTCAAAGCATGGAGA
CCCGTGCAGAAATCCTTAATATTCATTTAACTCCTAGGCAAATCATTACC
CCTCAGGCAAAKAAGCCTGTAATGGGTATCGTGCAGGACACTCTAACAGC
TGTAAGAAAAATGACAAAACGAGATGTTTTTCTCTCAAAAGAAGAAATGA
TGACTCTTGTCATGTTTTTGCCAACTTGGGATGGCAAGCTTCCCATTCCT
GCTATCATAAAACCAAAGCCCCTTTGGACGGGAAAGCAGTTAATTACTCT
CATTATTCCTGGCAATACAAACTGTATGCGACTTCATGCTACACATCCAG
ATGAGGAGACTAATGGTCCATATCACTGGATATCTCCTGGAGATACCAGG
GTTCTTATCGAACATGGTGAGCTTGTTATGGGGATATTGTGTAAAAAATC
ATTGGGTACTGCCGCTGGATCTCTTCTTCACGTTTCTCAACTTGAAAATG
GTCATGAAATTAATGGTCGTTTTTATGGAAATATTCAAACTGTCGTAAAT
AATTGGTTATTGCTTGAAGGGCATAGCATTGGTATCGGGGATACTATTGC
TGATCCTCAAACATATCAGGACATTATCAATACAATCAGAAAAGCTAAGG
ATGAAGTAACAGAAGTTATTCAAAAGGCTCATTCAGATGAGTTAGAGGCA
ACCCCCGGTAATACACTTCGACAAACCTTTGAAAATAAGGTTAATCGTAT
ATTGAACGATGCTCGAGACAAAACTGGAGGCTCTGCTAAAAGATCTTTAA
CTGAATTTAACAATTTCAAGGTAAGAAAAAACGCTGAAAAAATTATTTAA
TAATTCATTTTTTTTTTTCATAGGTGATGGTGGTGGCTGGATCTAAGGGA
TCAGATATTAATGTTTCACAGGTTATTGCTTGTGTTGGGCAACAGAACGT
TGAGGGTAAACGTATTCCTTTTGGTTTCATTAAAAGAACCCTTCCCCATT
TTATTAAGGACGATTATGGTCCTGAGTCGAGAGGCTTTGTGGAAAATTCT
TATTTAGCCGGGTTAACTCCATCTGAGTTTTACTTTCACGCTATGGGTGG
TAGAGAGGGTTTGATTGATACTGCTGTAAAGACTGCTGAAACTGGGTATA
TTCAACGTCGTCTTATTAAGGCTATGGAATCTGTTATGGTTTGCTATGAC
GGAACAGTACGTAATGCAGTAGGTCAACTTATCCAGTTAATTTATGGTGA
GGATGGTCTTGCTGGCGAGMACGMAGAATTTCAAACTCTGAAGACGATAT
CCCTTTCTAATCATACCTTTGAGAAAAAGTTCAAATTTGATCCCACCAAT
GAGCGATACGTAAGAAAGCTTTTTACGGATGATGTACTTCGTGAAATGGT
GGGAAGTCCTGAGGTAGTAGCTGAAATTGAGAGAGAATGGACACAGCTAT
GTAAGGATAGAGAAGCTCTGCGGCAAATCTTTCCAACAGGAAAGAAAAAT
GTCGTATTACCTTGTAATCTAGAAAGAATGATTTGGAATGCACAAAAGAT
TTTCCATATTAATAAGCGTGCACCAACCGATCTTAGTCCATTAAAAGTTA
TAACAGGAGTTAGAGAGCTTGTGAAACGATGTGTTATTGTGCGGGGATTG
GATAAACTCTCTACTCAGGCCAATGACAATGCTACAACTCTATTCCAATG
TCTTGTACGATCCACCTTGTGTACAAAGCTTGTTTCTGAGACTCATCGTC
TTAGTGAAGAAGCATTTGAATGGTTATTGGGAGAAATCGAATCAAAGTTT
TTTTATGCTCAGAGTACTCCTGGAGAAATGGTTGGTGCCATGGCTGCTCA
ATCCATTGGTGAGCCTGCAACTCAAATGACCCTGAACACCTTTCATTTTG
CTGGTGTGTCATCTAAAAATGTAACTCTTGGTGTTCCTCGACTTAAAGAA
ATTATCAACATCTCGAAAAAACCTAAAGCCCCTTCGCTTACAGTCTTTCT
TACTGGTTCGGCTGCCAGGGATGCTGAGAAGGCCAAGAATGTGCTCTGTA
GATTGGAACATACCACTCTCAAGAAGGTAAAGACTCGCTTATAATTTTAT
TATTTCAATAAAAGTATATTCGTGTTCCATCTTTGTTTACAGGTCACTGC
AAACACTGCAATCTATTATGATCCTGACCCTCAAAATACATTTATCGCTG
AGGATCAAGAGTTTGTGAATGTTTATTATGAAATGCCTGATTTTGATCAG
TCACGGATATCTCCTTGGCTATTGAGAATTGAGTTAGACCGTAAAAGGAT
GACAGATAAAAAACTCACCATGGAACAAATTTCAGAAAAAATAAATGCAG
GTTTTGGTGATGACTTGAATTGTATTTTCAATGATGACAACGCAGAAAAG
CTCGTACTACGTATTCGTATCATGAACTCAGATGACTCGAAGGATACAGA
TGAAGAACAAGCCGATAAAATGGAGGACGACATGTTCTTAAGGTAAGGAA
GTTATATAAATTATGAATTCTATTAATGAAATAATCTTCCTATTTTTCAG
ATGCATCGAAGCAAACATGCTCTCTGACATGACGCTTCAAGGTTTAGAAG
CCATTTCTAAAGTATACATGCATTTGCCAAGCACGGATGATAAGAAACGA
ATGATAATTACTGAGCAAACCGGAGAGTTTAAATCCATTGCAGAATGGCT
TTTAGAAACTGACGGCACAGCTCTCATGAGAGTACTGTCTGAAAGAGATG
TTGACTCAATTCGAACCACATCAAATGATATCTGTGAGATATTCAGTGCT
TTAGGTATCGAAGCCGTTCGTAAGTCTGTAGAAAAAGAGATTTTCACTGT
ATTCAACTTTTACGGAATTTACGTCAATTATCGTCACTTGGCCTTGTTGT
GTGATGTTATGACTGCAAAAGGTCATTTGATGGCTATTACTCGTCATGGA
ATCAATAGACAAGATACTGGTGCTCTCATGAGATGTTCTTTCGAAGAAAC
TGTGGACGTTCTTATGGACGCAGCTTCTCATGCTGAAGTTGATCCTATGA
AAGGAATATCTGAAAACATTATTCTTGGTCAGCTACCTCGTATGGGAACA
GCTTCCTTTGATCTTCTTTTGGATGCTGAGAAATGCAAATATGGTATTGA
AATTCCTATGAATGCTGCGGGAGGTATGATGGGAGGCCCTGGATTATTTT
TTGGATCTGCTGCTTCTCCTTCTGCATCCATGACTCCAGGAATGACACCA
TGGGCTGCTGGAGCTACCCCAGGATATGTTTCGGCCTGGMCTCCGCCTGG
ATCGGGCATGACTCCCGGTGGACCTGGATTCTCTCCATCAGGACAAAGTG
ATGCCTCCGGACTTTCGCCAAGGTACTCATCCTGGAGTCCACAGCCCAAT
TCTCCTGGATCTCCCGCTATGTCTCCATATATTGCATCTCCAGGAGGTAT
GTCACCAAGTCTATCTCCATCAAGTCCGACTTACGCTCCCATGAGCCCTA
GTTTAGCGTCACCAACTTCTCCGGGATATAGCCCCACTTCAGGATATAAC
GTTACTTCTCCTGGATATAGTCCTACGTCTGCATATAACATGTCATCCCC
TGGTTATAGCCCGACGTCACCAAGCTATAGTCCAACATCTCCAAGCTATA
GTCCAACGTCACCCAGCTATAGCCCAACGTCACCCAGCTATAGCCCTACT
TCGCCTAGCTATAGTCCAACGTCGCCAAGCTATAGTCCAACGTCGCCAAG
CTATAGCCCCACGTCTCCAAGCTATAGCCCTACTTCGCCTAGCTATAGCC
CCACATCTCCAAGCTATAGCCCAACATCCCCGAGCTATAGCCCTACTTCA
CCCAGCTATAGCCCAACGTCACCCAGCTATAGTCCAACATCTCCAAGCTA
CAGTCCTACTTCTCCAGGATATAGCCCAACATCTCCAAGTTATAATGCAG
CATCTCCGAGCTKCTCTCCAGCCAGCCCCTCTTATTCTCCAAGCTCACCG
CAGTATTCTCCCAAGAGTCCAGGKCACTCACCACAGAGTCCATCCTACTC
TCCAAGTAGTCCCAAGTACAGTCCTACTTCTCCAAGTTATAGCCCAACCT
CCCCAAACTKCTCACCATCCTCCCCCTCCTACTCTCCCACTTCTCCCAAT
TATTCTCCAACATCCCCTACGTATTCCCCCTCATCTCCGAAATATTCCCC
ATCATCCCCCAAGTACTCTCCGACCTCTCCCCAATATTCACCAACCAGCC
CTACATCTCCAGGCTATTCCCCTACATCTCCGCAATATTCACCCACGGGG
AATCAGTKCTCCCCCACCAGTCCCACCTACTCCCCAACCAGTCCCACTTA
TTCACCGTCCTCTCCCAATTACTCAACCTCTTCCCCCACTTACATGCCAT
CAAGCCCCTTTTCACCTGCATATTCTCCTTCTTATGCACCCACATCACCT
ACGTATGATGTTGAAGAGGACAGTAATGAGGACAAGAACAAGAAGAAGAA
GAAAAAGAGTTCTAAGTGA back to top
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