EMLSAT00000008911, EMLSAT00000008911-704758 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008911
Unique NameEMLSAT00000008911-704758
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:73261..74145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008911 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008911EMLSAG00000008911-691677Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039581EMLSAE00000039581-748509Lepeophtheirus salmonisexon
EMLSAE00000039582EMLSAE00000039582-748510Lepeophtheirus salmonisexon
EMLSAE00000039583EMLSAE00000039583-748511Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771388auto771388Lepeophtheirus salmonispolypeptide
EMLSAP00000008911EMLSAP00000008911Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008911

>EMLSAP00000008911 ID=EMLSAP00000008911|Name=EMLSAP00000008911|organism=Lepeophtheirus salmonis|type=polypeptide|length=241bp
MVAAAFPLAKLGXLXIKQVSKPIAKSLADRAXASQFFRNRICIPIANLFH
WYDVKTRMKSLNLGDVKSVPKLNEKNAIDTGAQILSEMVIFCVAAGILIL
EMIRQSDKEEAKQQVILEEKDALKRTITNLEFRVEKQSVQIRQVELTRLS
HRIQESLHKKSLKSLFNEAPELPLELQEIETEGETKDDDTEXKPTSSPMN
VIAQTSESPHKITLTPDGDEVTYKGYIESFIDLIFWRSPKK
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mRNA from alignment at LSalAtl2s554:73261..74145+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008911-704758 ID=EMLSAT00000008911-704758|Name=EMLSAT00000008911|organism=Lepeophtheirus salmonis|type=mRNA|length=885bp|location=Sequence derived from alignment at LSalAtl2s554:73261..74145+ (Lepeophtheirus salmonis)
ATGGTGGCTGCTGCTTTTCCATTAGCGAAACTTGGAGMTCTGGMTATCAA
GCAAGTGTCCAAACCTATTGCCAAGAGTTTAGCGGATCGAGCTSGAGCCT
CTCAATTTTTTCGAAATCGAATATGCATTCCCATTGCGAATCTCTTCCAC
TGGTTTATATTCTTTTTTTATTATCATATTTAATTAAAAATATAAAGTGA
AAACACTCGGTGATGATTTTATCATAGGTACGATGTAAAAACTCGAATGA
AGTCCCTTAATCTAGGAGATGTCAAATCGGTTCCTAAATTGAACGAAAAA
AATGCAATCGACACCGGAGCACAGATTTTATCTGAAATGGTAATATTTTG
TGTCGCCGCGGGAATATTAATTTTGGAAATGATACGTCAGTCTGATAAGG
AGGAGGCTAAACAACAGGTCATACTTGAGGAAAAAGATGCTTTGAAGAGA
ACCATCACCAATTTGGAATTTAGAGTCGAAAAACAATCCGTTCAAATCAG
GCAGGTGTTGTCTTTTTAAAAAAGACGAAAATGAATTTATCATTAATTAT
ATATTAATCATGTGTTATTATTATTATTTTACTTTTGTAGGGAATTAACG
AGGCTCTCTCATAGGATCCAAGAGAGTCTCCATAAGAAATCCCTCAAGTC
TCTCTTCAATGAAGCTCCGGAATTGCCTCTTGAGCTCCAGGAAATTGAAA
CGGAAGGAGAAACTAAAGATGACGACACGGAGGMCAAACCAACGTCGTCT
CCCATGAATGTGATTGCACAGACAAGTGAATCCCCTCATAAAATCACGCT
AACTCCTGATGGAGATGAAGTCACTTACAAAGGCTACATTGAGTCCTTCA
TTGACCTCATTTTTTGGCGTTCTCCAAAGAAGTGA
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