EMLSAT00000008915, EMLSAT00000008915-704762 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008915
Unique NameEMLSAT00000008915-704762
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:81280..82852 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008915 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008915EMLSAG00000008915-691681Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039601EMLSAE00000039601-748529Lepeophtheirus salmonisexon
EMLSAE00000039602EMLSAE00000039602-748530Lepeophtheirus salmonisexon
EMLSAE00000039603EMLSAE00000039603-748531Lepeophtheirus salmonisexon
EMLSAE00000039604EMLSAE00000039604-748532Lepeophtheirus salmonisexon
EMLSAE00000039605EMLSAE00000039605-748533Lepeophtheirus salmonisexon
EMLSAE00000039606EMLSAE00000039606-748534Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771628auto771628Lepeophtheirus salmonispolypeptide
EMLSAP00000008915EMLSAP00000008915Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008915

>EMLSAP00000008915 ID=EMLSAP00000008915|Name=EMLSAP00000008915|organism=Lepeophtheirus salmonis|type=polypeptide|length=419bp
MTLTDLVSSLSDNPYFGAGFGLFGLGAVTAMVRKGSQIGFIMFRRHCVTT
VEVTCQDKSFEWLLHWITKRGARKSQHLTVDTTYIESESGKISTRYDFQP
SVGLHLIFFRGTWIQVERTREQRLTEPWETVQLTTIGKQRQLFADILDEA
REMAMEATSGKTIMYTAIGTEWRPFGHPRQKRMVSSVILDENIGLNIVSD
VREFIESSLWYRERGIPYRRGYLLHGPPGCGKTSFITALAGELDYSIAVL
NLSDRGMSDDRLQHRLADAPENSIILLEDVDAAFVSRDENPHLEAAYQGL
NRLTFSGLLNAIDGVTSTEGRILFMTTNYLDRLDPALIRPGRVDVKQYIG
YCSHKQLSDMYMKFYPDAPLIKAEEFGKKVIELNLPISAATLQGYFMFFK
HSPDLAHEKVEYLQPRKAQ
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mRNA from alignment at LSalAtl2s554:81280..82852-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008915-704762 ID=EMLSAT00000008915-704762|Name=EMLSAT00000008915|organism=Lepeophtheirus salmonis|type=mRNA|length=1573bp|location=Sequence derived from alignment at LSalAtl2s554:81280..82852- (Lepeophtheirus salmonis)
ATGACTCTGACTGATTTAGTTTCATCCTTGAGTGACAATCCCTATTTTGG AGCTGGATTTGGTCTCTTTGGATTAGGTGCAGGTAATTGGATCCTCAAAT TACCATTTAAAATATGATACTCTTAATCCTTACTCTCTTAGTAACTGCAA TGGTGCGAAAGGGATCACAAATCGGTTTTATAATGTTTCGTCGTCACTGT GTGACCACTGTAGAAGTCACATGTCAGGACAAAAGCTTTGAATGGCTTCT CCACTGGATCACTAAGAGAGGTGCAAGGAAATCCCAACACTTAACCGTTG ATACAACATATATTGAATCCGAATCTGGAAAGATTTCAACACGATATGAT TTTCAGCCTAGTGTAGGACTCCATCTAATTTTTTTTAGAGGTACGTGKGT TAGGGAGCCAACATTAAGAGTTTTAAAAAGATGGAGTTAATGCATTTTAC TAAGATTAGGAACTTGGATCCAAGTGGAAAGGACTCGAGAGCAGCGCTTG ACAGAACCTTGGGAAACTGTTCAACTCACCACAATTGGAAAACAAAGACA ACTTTTTGCGGATATTTTAGATGAAGCTAGGGGTAAGTTATTACTTTAAA AGGCCGAGTGTCTCGCCACATTAAAAATTGTATTCTTTATTTTGAAAGAA ATGGCTATGGAGGCCACGTCTGGTAAAACAATCATGTACACTGCCATAGG GACTGAGTGGCGTCCTTTTGGACATCCACGACAGAAACGAATGGTATCAT CTGTTATCCTGGATGAAAATATTGGCCTTAACATTGTGTCTGATGTTCGT GAGTTTATTGAAAGCTCTCTTTGGTATAGAGAGCGTGGCATACCTTATAG AAGAGGCTATCTTTTACATGGTCCTCCAGGCTGTGGAAAGACGTCATTTA TTACAGCTTTAGCGGGAGAGCTAGATTATTCAATAGCCGTTCTAAATCTC TCTGATAGAGGTATGTCAGATGATCGACTGCAGCATCGTTTGGCCGATGC TCCTGAAAACTCAATTATTTTGCTTGAAGACGTGGATGCAGCTTTTGTCA GTCGAGACGAGAATCCTCATTTGGAGGCAGCTTACCAAGGTGAGTGATGT TCTAACTTTGTTTCATTTAAACGGATTTAAATAAAAATATTGTATCAGGA CTCAATAGACTCACGTTTAGTGGATTATTGAACGCCATCGATGGAGTCAC CTCTACTGAAGGACGCATACTCTTTATGACTACAAATTACTTAGATCGGT TGGATCCTGCATTGATTCGTCCTGGACGAGTAGACGTGAAGCAGTATATT GGTTACTGTTCTCACAAGCAACTTTCAGATATGTACATGAAATTCTATCC TGACGCTCCCCTTGTAAGGATCTATCTATATATTAAATTGTTTTAATACA CTCAGTTTGTACATTTTTTTCAGATAAAAGCAGAAGAATTTGGCAAAAAA GTAATAGAGTTGAATTTACCCATCAGCGCGGCTACACTTCAGGGATATTT CATGTTTTTCAAGCATTCACCAGATTTAGCACATGAAAAAGTAGAGTATC TTCAACCTAGAAAAGCTCAATGA
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