EMLSAT00000008918, EMLSAT00000008918-704765 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008918
Unique NameEMLSAT00000008918-704765
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:384657..385299 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008918 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008918EMLSAG00000008918-691684Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039617EMLSAE00000039617-748545Lepeophtheirus salmonisexon
EMLSAE00000039618EMLSAE00000039618-748546Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777122auto777122Lepeophtheirus salmonispolypeptide
EMLSAP00000008918EMLSAP00000008918Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008918

>EMLSAP00000008918 ID=EMLSAP00000008918|Name=EMLSAP00000008918|organism=Lepeophtheirus salmonis|type=polypeptide|length=59bp
MSSVILLINTNNYFLLYLLQNVILRYAILVLVDGVLEVVDIFVRGIAGIG
LNMNSKREV
back to top

mRNA from alignment at LSalAtl2s554:384657..385299+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008918-704765 ID=EMLSAT00000008918-704765|Name=EMLSAT00000008918|organism=Lepeophtheirus salmonis|type=mRNA|length=643bp|location=Sequence derived from alignment at LSalAtl2s554:384657..385299+ (Lepeophtheirus salmonis)
ATGTCATCAGTTATATTACTCATAAATACAAATAACTATGTAATTTAAAT
AAGTTCGATGCTAATCTGAATGATTTGAAGACAAAGAAATTTTAACTTGT
ACAATTTCCTTATACGAGTTGTAACTTGTACAGAAATTGCCACTTGTACA
CAACATATACAAAGAATGCAATGTTTTTAAGAGTTTGTTAATAAATTTTT
TTCTCTTTAGTAATTATAATTAATTAGAGATATTAATCAAGGAAATAACC
TTCAAGGTTGATTATATCTATGATTTCGGTCAAAAATTTAGATTTATATG
ACTAAAGAGCTATTAATATAGCTTAGGTTGGCTTCATACATATACTGACA
GAATATACTAATTGTAAATCATCTCACGAACTCATAAAGAAAATCAGGGC
AGTAGTAACTTATAAGAGTAATTTTTGAATCTATTGATTATCTATTTACT
CTCACTTTTAAATAGATAATAATTAATTTACTTAGAGCATTTTTATATTC
AGTTCCTCTTATACCTATTGCAGAATGTAATCCTCAGATATGCCATCCTA
GTGCTAGTTGACGGTGTCCTTGAGGTTGTTGATATTTTTGTGAGGGGCAT
TGCAGGCATTGGACTCAACATGAACTCAAAGAGGGAAGTCTAA
back to top
Add to Basket