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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s557 | supercontig | LSalAtl2s557:71769..77773 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008953 >EMLSAP00000008953 ID=EMLSAP00000008953|Name=EMLSAP00000008953|organism=Lepeophtheirus salmonis|type=polypeptide|length=516bp
MDDETGARSYGEKTNQKVLGSNTFPLGVVTENSVIIIRNLNLKRRKQQRR
SDRMSSSTTETPSSFPEPRFSDHTWDKATKAKVTLENYYNNLISQHKERR
GRLLRLEESLKDEPESQKLEKLQQHAVKETEYLRFKRSRLGVDDFDSLKI
IGRGAFGEVRLVQKVDTGHVYAMKILHKVDMVKKEQLAHVRAERDILVEA
DHQWVVKMHYSFQDLNNLYLIMEFLPGGDMMTLLMKKDTLSEEVTQFYIA
ETGLAIEAIHKLGFIHRDIKPDNLLLDARGHVKLSDFGLCTGLKKSHRTE
FYRDLSQANPSDFTSGPSNSKRKAESWKKNRRQLAYSTVGTPDYIAPEVF
LQTGYSSNCDWWSLGVIMFEMLIGHPPFCSENPQETYRKIMNWKGALVFP
PEVPISESAEETIRKFCCESDFRVSSLDDIKKINFFQGVDWDHIRERPAA
IAVNVKSIDDTSNFDEFTETDLTLPKPPKTCDQKSGYKDWVFINYTFKRF
EGLTQRGPILPIRKKS back to topmRNA from alignment at LSalAtl2s557:71769..77773+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008953-704800 ID=EMLSAT00000008953-704800|Name=EMLSAT00000008953|organism=Lepeophtheirus salmonis|type=mRNA|length=6005bp|location=Sequence derived from alignment at LSalAtl2s557:71769..77773+ (Lepeophtheirus salmonis)
TCTTAATACGACAATAACATAGTTACAACTTTTCCTGAATAATGTTTCAA
CAACAAGTAGTAACTTTAATTTCAATCTAACAACAATAAGATTAACTAAC
AATACTTTTAGCCTTGATTTTGAAAAGCTTTATCACATTCTAAGTATGAT
TCAAGTCCTCCAACGTCAAACCTACCTTTTATTGAGTATCCAAAAACAGG
GGATCTTGGGATAAGATAAGAGAGAAAATGCCCAGGGGCATCTCGAACAA
CCAAGGGGAGATACTTGGTTTCACAAATGAAAGCTTCTAAAAAGGCGACT
GAGTCTTCATTGAAAAGGTAGAAAGCTGGACATTGAAGTCTATGTGAGGT
ACAGAATATGTATCAAATTTGGACATATTAATTGAAAGTATAATTACCTA
GATTTTGTTTCATGCGGCAGTGGTTTTTCAATAAATGATAGAACCCTTTT
TGTTTTCCCATCAACTTCGACAATACCCCGTTTAGAAACGTCATCTTCGT
TCACGGGACAAGTCAGGATAGTTGTTCCACATTTTTTTTTGAAAAAATGT
ACAATATTATCTATTTTAAAGTCATCTAAATAAAGAGTATCTCCAGCGAT
GACGAGAAAATTTGAACATTCTAATCTATATTGAATTCCAAGACTGATGG
CTTTTATTGCTCCTTGCCGGTTGTCATTGTTTGTACTACCGTCGTTAATC
AAGTTCACTTTCAATGTAGACCTATCTGAAAATCATTAGCTTACATAAAT
ATNGTATGTCTGAGATATCAATATTAGCTATAGCCACTACTACCACATGA
TAAACCATTAAACAAAATCTTGATTACTACCTCTTGAATTGACATCATTG
CTCCATTCTTCATAGAGATGAAAATACTTTTGATTCACAACTACATTGAT
GAGAGGGTCAAATGTATTCTCCAAATTCTCTAAAATAGTGAGCCATCGAT
TAATCAAAGATTTGCCTCCAATAGGAAGAAGAGGCTTAGGAATGCCACTT
AATCTTGATCGGAGCTCCTCATCTAAAGTGCTATCTATATCCTTCTCAAG
TCTTGTACCATACCCGGCAGCTAAGATGATTACTTTAATTTTATCTGTCA
TCAATCTAATAACAAAAATCAAATAAAGTTTTATTATTGAATTTTGTTTT
CATTATATTGCATCAAATGACTTTATGCCTTTTTATTAATTAATATTAAT
TTAAAGAAGTCAGACAAAGATAACCTTGCCTTTCTATTCCATTCAGAGTG
TCTAAAGTAACTAATAGTGACTGATTGGATAATTATCATAACCTTTTAGC
AACAAAATTAGCTAGTATGCTAATAATATAATGCATCAGAGACACAGAAA
ATTAAATCAATGTAAGACACTATTTAGAATTGCCTTTATTTCTCCTAGAA
TAGTAATTAACATAGGCTCGATTCTGGTAGCAAATTCTATGAAGTTCTTC
TTTTTTACTAACAACACGTCCCTCATTTTCAGATGCATCGATAATTTCTC
GAGCAACAAAATGAGCAAAAAGTTCTCCCTCTTTCCTTGTGGGACGGTTG
CGKCCAGCCTCAACGATCCATTTCATGCCATAGAAACGTTGTTTTGGAGG
TTGTATAGCAGTAGGAACAGTGTAATTAACCGAACCAACAGGAACGGACT
TTGTGACCATTAAAGGACTGCAATTATCGATTGCTTTATGAATAATTGTT
ATCGGGTCAACAATTATTTCAGAAGAGGAGGCATCGGCATTGGACGCTGC
ATTCCGTTTTTTATGTTGAGTTTCTTTGATCTGAAAATAGTAAAAAAAAA
TACATTTTAATTTTTATGACATGCCGAAGACTTTAGAAAGTAAACTACAA
CTTAAAACATACTTTTTTACAGATATCGTTCAAAATCTCTATCGACTTTT
CCCTCCTTCCTGCTTTCATGAATAGCCTTGAAAATTTGTCCATTTGATAA
TCCCGAAATACAGATACTGTAGATTCTTTTGGTGCTGATTTTATAGATKC
AGCCATTTTCTTTGCATATTCATCGCCTGACTCTTTCGCTTCTTTAAATT
CAACACGTGAAGCAAATGGATCTTCAAAGCCCTTTGGCCAAGGTGAACCA
ATTTTAGGATGCTTACTCATGCACCTAATCGTCAACAAACATTGAGATGC
CATCGATTTAATGGGATTCCTTATGTTGTGGAACATGATAGATGGATGAT
GAAAGTTAGTATGAATCTTGAAACAAAATATTATTATTTATATTTCAGTC
TGTTTAGAAAATGACGTCAATTCAGGGGCACCACACATTATTTGACTATT
TCATAATCAATGCAATTTAGATTTAATAACTATGAACAATTAATCGATTA
AGCTTATACTTAAATGTGTAAGCTAAATCTTGATGTACTAAGCCTCATAA
GGATATAAGTGGAACACATATGCTCTATTATCTATACCTGTCTCTTGTAA
ATATATAAACATATATTATACTTTCTGACCACATTAAATACAGGTCATGG
TGTACATGGTCAAAATATTTTTTTTTACCTTACGGTATATAACTAACCTT
ACTTAGAAATATATAAGAAAATGTGAATTTCTCTTTTTTTTTGTTCTTGT
TAAGGTTTTTACAAAAATATGGTTTATAACGTTCATGAGCAAGAGCCATC
TCCCTTGAAATGTCCTAATTGCAATTTGATACAAGGTATAATGCTCTGCA
TTTGAATATTCAGAATTCAAAGGCAGTATTTTCAAATAGGATATGCATAT
TATTGTGATATTTAATTTATAATGTAGGTGTATAAACTATAAAGCTATAG
AAATAGAGTAGTGAATATATTAAGGTTTGTCAGTCTTAAATGCAGGCTGG
CTAGAGAACAGAAGGAAAGAAATAAAGAGAGAGAGAGAGAGTGAGTGAGT
CAAGAACTGTGAGTCTATTGTTTACTTCAAATGACAATTAAATAAAACAC
AGACATACGTACATTGACAACAATATATTAATTATTGTATCTAAATCTTG
ATTAATAAATATTTATATTAAATGTTGTTGTTGTTGTAGCTGGAGCGAGA
AGCTACGGAGAAAAGACTAATCAAAAAGTGCTTGGGTCCAATACATTTCC
ATTAGGAGTCGTCACGGAAAACTCAGTCATAATTATTCGGAATTTAAACT
TAAAGAGACGAAAGCAGCAACGACGAAGTGATAGGATGTCCTCATCGACG
ACGGAGACTCCTTCTTCCTTCCCTGAGCCGCGTTTCTCGGATCATACCTG
GGACAAAGCAACAAAAGCCAAAGTTACACTTGAAAACTACTACAATAATC
TAATTTCTCAGCATAAGGAACGAAGGGGCAGGTACTAAAGCTTAAAAGGA
TCTTTCTCTGAAGTAATTCAGTAATAATATTTCCATTTGATCCTCTTATT
TCTAGACTATTGCGCCTGGAAGAGTCCTTGAAGGATGAGCCCGAATCTCA
AAAGTTGGAAAAACTTCAGCAACACGCTGTCAAAGAGACTGAATATTTAC
GCTTTAAAAGATCGCGTCTAGGCGTAGACGATTTTGATTCCTTGAAAATC
ATTGGACGTGGTGCATTCGGAGAGGTAAGCATGAATTTTATTGATGTTTT
TTTAGATCATATTCATCTTAAATCATTATAGGTACGACTTGTTCAAAAAG
TGGATACGGGTCATGTCTATGCGATGAAAATATTGCATAAGGTAGATATG
GTCAAAAAAGAACAATTGGCTCACGTTAGAGCAGAAAGAGATATTCTGGT
AGAAGCAGATCATCAATGGGTTGTTAAAATGCACTATTCCTTTCAAGATC
TGAATAATTTATATCTCATCATGGAATTTTTACCTGGTGGTAAGGAAGGA
ATTGTGCAATTAACAATTTTCAAATAATCTGGGTTTTTTTTCTAGGAGAC
ATGATGACATTGCTAATGAAAAAAGATACATTGTCGGAAGAAGTAACTCA
ATTTTACATTGCTGAAACTGGATTAGCCATTGAAGCCATTCATAAATTGG
GGTTTATTCATCGGTAAGAGTTTGTATTGGTTAATTATTTAGAGTAGCAT
ATTGACAAAATAACAATCTCTTATAAAATATTCATTAACTAATTAAGTTC
GTATGTTATGTTTCTAGGGACATTAAACCGGACAATCTTTTACTTGATGC
CCGTGGACATGTTAAGTTATCTGACTTTGGTCTTTGTACAGGATTAAAAA
AGTCGCATCGGACTGAATTTTATCGTGATTTATCTCAGGCAAATCCTTCT
GACTTCACATCTGGCCCTTCTAATTCCAAGAGAAAAGCTGAAAGCTGGAA
GAAAAATCGTCGTCAGTTGGCATACTCCACTGTTGGAACTCCAGATTACA
TTGCACCGGAAGTATTTTTACAGGTAAAGGAATCACAAGGATGACTTATT
TTTGTTTTTATTGTATGATTGTATTTTTATTATAGACCGGTTATTCCTCA
AATTGCGATTGGTGGAGTCTTGGAGTAATCATGTTTGAAATGTTGATAGG
ACATCCACCTTTTTGCAGCGAAAATCCTCAAGAGACCTATAGGAAAATAA
TGAATTGGAAAGGAGCTTTAGTTTTTCCGCCTGAAGTTCCAATATCTGAA
TCAGCAGAGGAAACTATACGAAAGTAGGAAACTATTTATATTTAACATTG
ATTATATTTATTTTCATACAATTATGCTACACAGGTTTTGCTGCGAGTCT
GATTTTCGAGTTAGCTCTTTAGACGACATAAAAAAGATCAATTTTTTCCA
AGGTGTTGATTGGGACCACATACGAGAACGTCCTGCTGCTATCGCCGTCA
ATGTTAAATCTATTGATGATACTTCAAACTTTGATGAGTTTACTGAAACA
GATTTAACCTTACCAAAGCCTCCTAAAACATGCGACCAAAAATCTGGTTA
TAAAGACTGGGTCTTTATAAATTATACGTTTAAAAGATTTGAGGGACTTA
CTCAAAGAGGTCCTATTCTTCCCATTCGAAAGAAATCTTAACCTGATCCA
ATGAGTAAGCAATGCAAGAGGGAACAAAGTCATCAAATGAGACTTGACGC
CTACATATGTAAACCAAAATCGTCAGATATTGATTTTACAAGAATTTAGT
ATTCTATGAAGAAGAATTTATTATTACCAGGCATATTGACATACTTTTAA
CATATCCTTTGGTATACAGAGTAAGCAGTATTTACTATTAAGCCTTTACC
TGTATTTATTCCCTTTTAAAAAATATATAATAAGAACACTGAATTATTCC
GGTACGTTTTTTAAGATAACTATTACACTATCTACAATGTTGTTGCAATA
GTTTTTAAGATATGTATTGTATATATTATATGAGTTTCATTTTTGTACCA
TGCATTTACTTTTTTTAAGATAATTATATTATTTATGATTTAACTTCTCT
TAATGTGGTGCACATCACTTGCTTTCACGACTTGGAAAAAGAGATAAAAA
GAATCTGTTAGTTGACAATTTATGAATGATATTTATAAAATTGTAATCCC
CCCCCCTCCCCCCTCATCTGTGACATTGCAAATATACTTACTTTTCCCCT
TCTGTGATATACATATTTATATTTTTGGATTTGTAAAAAGTTGTTTAATT
TCTCTTCAATATAAAATTGAAGGACTTGTGTTGTAAGCCTTTGATCAATC
CTTTGAAAGCTCATAAAGTGGAGACTATAAAATTGTCTATTTTTCATTAA
TACATGTCTTTTGTACTCATTTTCTATCCAAAGTATGCATGCATAAGAAA
AAATAAGGAAATATACTTAATATATATATAGGAATCTATAATTTGGTCTG
ATGAAAATCTCAGGTATTATATACATGTTTCATCAATACTATCTTTCTTG
TTGTTTGATCGATATAATTCAAATAATTCGATGTAGTTTCAAAATACTCC
TGTCATTTTATTTAAAATTAAGGGAATTGTTGCTTAATAAATAATGTTGA
TTTAATTGTTGCGACGTCTTATTTAATTCAAATGGTAGATAAGAGCCACT
GGCGG back to top
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