EMLSAT00000008958, EMLSAT00000008958-704805 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008958
Unique NameEMLSAT00000008958-704805
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s558supercontigLSalAtl2s558:51017..53161 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008958 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008958EMLSAG00000008958-691724Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039777EMLSAE00000039777-748705Lepeophtheirus salmonisexon
EMLSAE00000039778EMLSAE00000039778-748706Lepeophtheirus salmonisexon
EMLSAE00000039779EMLSAE00000039779-748707Lepeophtheirus salmonisexon
EMLSAE00000039780EMLSAE00000039780-748708Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770685auto770685Lepeophtheirus salmonispolypeptide
EMLSAP00000008958EMLSAP00000008958Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008958

>EMLSAP00000008958 ID=EMLSAP00000008958|Name=EMLSAP00000008958|organism=Lepeophtheirus salmonis|type=polypeptide|length=439bp
MSFVLFFGFFFIFCVRGDDLNRQSIVFYEETPEVFYCPQEKAISLGGMIV
KAKPLDKLCEHGGKGLPEDYRSDCWNDVDETEYACQEKERILLKLKPPGY
ENAIIDNYIPIFKRGEYKLLITMSHSHNPGIPLDLGWIDSVQVNLSLVNR
RAKVLPTSRIINGKDKIPWLVRAINCIDLTTLAGDDTPSNVHRLVHKALR
PLHQDILDELDVDVITVAAVCVYPARVEDAAKSFTKFKRQIPIAAXATGF
PSGQYSLKSRIDEIKYAIASGATEIDIVINRTLALKNDWDELYKEVKSMK
EACGPKIHMKSILAVGELGTLSNVYKCSLICMMAGSDFIKTSTGKEGVNA
ILPVGIVMTRAIRDYHERTGFIVGFKPAGGIRTSEDAINWLILMKEELGD
MWLCNNLFRIGASGLLTDIETNLYKLVKGCHPNPKELCF
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mRNA from alignment at LSalAtl2s558:51017..53161-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008958-704805 ID=EMLSAT00000008958-704805|Name=EMLSAT00000008958|organism=Lepeophtheirus salmonis|type=mRNA|length=2145bp|location=Sequence derived from alignment at LSalAtl2s558:51017..53161- (Lepeophtheirus salmonis)
ATGTCGTTTGTATTATTTTTTGGATTTTTCTTTATTTTTTGTGTCAGAGG AGACGATTTGAATCGTCAATCCATCGTTTTCTACGAGGAAACCCCTGAAG TATTTTATTGTCCTCAAGAAAAAGCAATTTCTCTCGGTGGAATGATCGTA AAGGCAAAACCATTGGATAAACTATGCGAGCACGGAGGAAAAGGACTTCC AGAGGATTATCGATCTGATTGTTGGAATGATGTAGATGAAACTGAATATG CTTGCCAAGAAAAAGAAAGAATTCTTCTAAAGTTGAAACCTCCAGGATAT GAAAACGCCATAATCGATAACTATATACCCATCTTTAAAAGAGGCGAGTA TAAAGTTCTTCATTTGGATAGTCATGGAAGACCAAGAACGCCTAAACAAA TCAAATTTGACGATTAATGACTTCAATATCAATAGCTCCTCCGTTGAATA GGTCCTAAATGTCATAAACAATACAGATATCTATTAAAAATAGTGTATTG TATTTGTATGATTGTTAGCTGCATAACTGTGATTTAATGTATACCTTACA TGCTTCAAGATTTATAAATTATTTTGTATATTATTAAATATTTTTGCTAT ATTTTTGTTTATACAATTTCACTAGAATTTGTCTGAATTTTTCGAGTCTA AATTTCTAACATGAATCGTTTACCAAATANAATATATAAACCACATTAAC TATACACCAAATATTGATATGCTATTTATTCATTGGCATAATTTTCATAG AACGACACTGAATTACGATCTTATTCTTAAAACAAATCTTAATTCAGTTT GAAAAAGGAGRAGAMCACACTTTGTTTTAATAGCCTATATTCATAAGGAA TACAAGTCTACAAGATCTACAATTTAATACGATAACCGAAAAAATGTGTT AATAATTTAATATTTGTATGTGTTATACAGTCAACAAACAAATGTGCTGG AGAAACGAATTTGAAATTCAATCTATATTAACACGCCTTAAATTACTCTC TTTTATAACTTGTTTTCATTGTTAACTTACTATTCCATTTGGTGTCTGTG TTTCCATAGCTATTAATTACTATGTCTCATAGTCATAATCCTGGCATTCC CCTCGATTTGGGATGGATTGATTCTGTTCAAGTTAATTTATCATTAGTTA ATAGGCGTGCTAAAGTGTTACCCACATCTCGAATCATCAATGGAAAAGAC AAAATACCCTGGTTAGTAAGGGCTATCAACTGTATTGATTTAACAACTTT AGCAGGGGATGATACTCCTTCCAATGTTCATAGATTGGTGCACAAAGCTC TCAGACCTCTGCATCAGGATATCTTGGATGAGTTAGATGTTGATGTCATC ACAGTTGCTGCTGTGTGTGTCTATCCTGCGAGGTAAGTTTTACATATGAG CATAATTCTTGAGTAATAAATTCTTATATAACTTAATAGAGTAGAAGATG CTGCAAAAAGTTTTACGAAGTTCAAAAGGCAGATACCGATTGCGGCTGKG GCCACAGGGTTTCCTTCTGGACAATATTCATTGAAAAGTAGAATTGACGA AATTAAATATGCCATTGCATCCGGAGCAACAGAAATCGACATTGTTATTA ACAGAACGTTAGCTCTCAAAAATGATTGGGATGAACTATACAAGGAAGTC AAATCCATGAAAGAAGCTTGCGGGCCTAAGATTCATATGAAGTCAATTCT AGCAGTTGGGGAATTAGGAACTTTATCCAACGTTTATAAATGTTCTTTGA TATGTATGATGGCTGGTTCGGATTTCATCAAGACCTCCACGGGTAAAGAG GGKGTCAATGCTATTCTCCCCGTTGGGATTGTTATGACCAGGTGAACAAT GTTTGTCATTATAATATCTGTATTTATTTAATGATGTTATTCTATTTAAA ACAGAGCTATTCGAGATTACCATGAACGGACAGGATTTATTGTCGGATTT AAACCTGCTGGAGGGATAAGAACTTCAGAAGATGCAATAAATTGGCTTAT TTTGATGAAGGAAGAGCTTGGAGATATGTGGTTATGTAATAATCTCTTCA GAATTGGTGCTTCAGGACTCCTTACAGATATAGAAACGAATCTTTATAAG CTAGTAAAAGGATGTCATCCAAATCCAAAAGAGCTTTGTTTTTAA
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