EMLSAT00000008970, EMLSAT00000008970-704817 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008970
Unique NameEMLSAT00000008970-704817
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s55supercontigLSalAtl2s55:339853..340967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008970 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008970EMLSAG00000008970-691736Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039851EMLSAE00000039851-748779Lepeophtheirus salmonisexon
EMLSAE00000039852EMLSAE00000039852-748780Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776571auto776571Lepeophtheirus salmonispolypeptide
EMLSAP00000008970EMLSAP00000008970Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008970

>EMLSAP00000008970 ID=EMLSAP00000008970|Name=EMLSAP00000008970|organism=Lepeophtheirus salmonis|type=polypeptide|length=156bp
MHSTFPLLSFLLLSVFFHQLQAESSTPKDELVVKILKKGRNCEEKKAEPG
DHLKLHYVGRVDNEDGKIFDSSKERGHLYKFQLGAHEVIQGYEEGIPGMC
EGEIRTLRIPPSMAYGGYGVPSVGIPPNSYLHFTVELKKIVKGELKXEHH
RPSDEL
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mRNA from alignment at LSalAtl2s55:339853..340967+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008970-704817 ID=EMLSAT00000008970-704817|Name=EMLSAT00000008970|organism=Lepeophtheirus salmonis|type=mRNA|length=1115bp|location=Sequence derived from alignment at LSalAtl2s55:339853..340967+ (Lepeophtheirus salmonis)
AAGATATGATTTTTGTATATAAATCTGTTTTAGTTCAATAAAATATATTC
GTATTTAACATATTTATAAACATGGTCCTCCACAAAACACTATACAGACA
TTTTACCCTTTAACTCAGAAAGGCAGACCACCCATGTTACTAATAAGAAA
TAACATCGAAATACCCTCAGATACACAAATACTTATTTTCTAACTACCAA
GTCAAATCCCTTTTAAAACAACATAAACTATCATTCGGATGATTCAATTT
GTCCATAGACTATTTTTTTATAAGCAAACATTTTGCTTACATACCTAATA
TCAAACCCAAACTTACTCAGCAGTCTTTCGTATAGCTGCTAGAAGAGAAA
AAGTTGATATCAACATTTATTTCTTCCCTTTATTTCGTCATCATCATGCA
CTCTACGTTTCCTCTCTTATCCTTTCTACTCCTCAGTGTCTTCTTCCATC
AACTTCAAGCAGAATCATCAACCCCAAAGGATGAACTCGTCGTCAAAATA
CTTAAGAAAGGTCGTAATTGTGAGGAAAAAAAGGCAGAGCCTGGAGATCA
TTTAAAGCTTCACTATGTGGGCCGAGTGGACAATGAGGACGGAAAGATCT
TTGACTCCTCCAAGGAGCGTGGACATTTGTACAAATTCCAACTTGGGGCT
CATGAGGTTTGTAATTTATATATCAATGTACTATTTTTGTTTCATTGATT
GTTTAGGTGATACAAGGATATGAGGAAGGTATTCCTGGGATGTGCGAGGG
AGAAATAAGGACTCTAAGGATTCCTCCCTCCATGGCATATGGGGGATATG
GTGTTCCTTCTGTCGGGATTCCTCCTAATTCTTATTTACATTTTACTGTA
GAGCTTAAAAAGATTGTTAAAGGCGAGCTAAAANCAGAGCATCATAGACC
GAGTGATGAGCTTTAAATCTGATTATCATCTCGTTTAAGAAAGAGACTCT
TTTACCTCAACCATTAAATTTGTTATTCATTGCTTATATTATACTACAAT
AAAGTCATAATTAAACTTTCTATGCATACTATTTAAAGCTAGGTCTTTTT
TTATCTTCAATCTACCCATAACGATTTACAAAAATCAAAGTTAACCGTTA
TTTAAACTTTGTAAT
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