EMLSAT00000008983, EMLSAT00000008983-704830 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008983
Unique NameEMLSAT00000008983-704830
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5623supercontigLSalAtl2s5623:1978..2679 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008983 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008983EMLSAG00000008983-691749Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039895EMLSAE00000039895-748823Lepeophtheirus salmonisexon
EMLSAE00000039896EMLSAE00000039896-748824Lepeophtheirus salmonisexon
EMLSAE00000039897EMLSAE00000039897-748825Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768204auto768204Lepeophtheirus salmonispolypeptide
EMLSAP00000008983EMLSAP00000008983Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008983

>EMLSAP00000008983 ID=EMLSAP00000008983|Name=EMLSAP00000008983|organism=Lepeophtheirus salmonis|type=polypeptide|length=171bp
MKCSIFVALVLVGITTSEVSKPSFLFEGSWLEMKESRTGVVEXLKLFGIN
ETSANAYSNGPMTMECIZLTENGYKVTGIQPSGVPYNASITWRKEAKSPY
TSFGVEMEFDAEVLKDNATHYNVLRFNAYNKTSGSLVFFTQRVFTSEGYM
NYSHTQAATKKTAYTLYQKQE
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mRNA from alignment at LSalAtl2s5623:1978..2679+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008983-704830 ID=EMLSAT00000008983-704830|Name=EMLSAT00000008983|organism=Lepeophtheirus salmonis|type=mRNA|length=702bp|location=Sequence derived from alignment at LSalAtl2s5623:1978..2679+ (Lepeophtheirus salmonis)
TTCATCATGAAGTGTTCTATCTTTGTAGCTCTTGTTCTGGTTGGAATAAC
GACTTCTGAGGTGTCCAAGTAAGTTGTATTTCTTTTGAAATAAATTTTTA
TTAAATTTTATCTCCCGACAACACAGGCCATCCTTTTTGTTTGAAGGATC
ATGGCTTGAAATGAAGGAAAGCCGAACTGGTGTTGTAGAGKACTTAAAGC
TGTTTGGCATAAACGAAACCAGTGCCAATGCATATAGCAATGGTCCAATG
ACGATGGAATGTATTSAATTGACTGAAAATGGTTACAAAGTTACTGGAAT
ACGTAATGTTCCAAAATTCTTTGTTATATTGTATATTAATATTGCTTATT
TTTAGAGCCCAGTGGTGTTCCATATAATGCATCTATAACATGGAGAAAGG
AAGCAAAAAGCCCGTACACATCTTTTGGAGTTGAAATGGAATTTGATGCA
GAGGTTTTGAAAGACAATGCTACACATTATAATGTATTGCGTTTCAATGC
TTATAACAAAACATCTGGCTCTCTGGTTTTTTTCACTCAACGCGTTTTTA
CGAGTGAAGGGTACATGAATTATAGTCATACACAGGCTGCAACGAAGAAA
ACCGCTTACACTCTATACCAAAAACAGGAGTAAATCTAAATTATTCCCTT
AGTTTTTAATAATGAATTTGTAAACTATACATTTCGTTTGAATAAATACG
TG
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