EMLSAT00000008995, EMLSAT00000008995-704842 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008995
Unique NameEMLSAT00000008995-704842
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5641supercontigLSalAtl2s5641:3040..4160 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008995 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008995EMLSAG00000008995-691761Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039938EMLSAE00000039938-748866Lepeophtheirus salmonisexon
EMLSAE00000039939EMLSAE00000039939-748867Lepeophtheirus salmonisexon
EMLSAE00000039940EMLSAE00000039940-748868Lepeophtheirus salmonisexon
EMLSAE00000039941EMLSAE00000039941-748869Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768358auto768358Lepeophtheirus salmonispolypeptide
EMLSAP00000008995EMLSAP00000008995Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008995

>EMLSAP00000008995 ID=EMLSAP00000008995|Name=EMLSAP00000008995|organism=Lepeophtheirus salmonis|type=polypeptide|length=133bp
MKKGHPVLPTLTKHPSCLEVISKAQLPVIAVSFKSCKKKMSAQFIGRSPE
LSSFLLLKGRMKGHGQRGWMCMNITSSEYMEKIKYCNGYRIFSSKSNKTK
ESMGTANIIVNDSLAKTLLKSDFFFRILGGVES
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mRNA from alignment at LSalAtl2s5641:3040..4160-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008995-704842 ID=EMLSAT00000008995-704842|Name=EMLSAT00000008995|organism=Lepeophtheirus salmonis|type=mRNA|length=1121bp|location=Sequence derived from alignment at LSalAtl2s5641:3040..4160- (Lepeophtheirus salmonis)
ATGAAAAAAGGTCATCCTGTTCTCCCCACACTAACTAAGCATCCGTCATG
CCTAGAAGGTAAGTTAGTTTGTTATATGTCGTAATCAATTTATTACTATT
TAATTTTATTTACAGTTATATCAAAAGCACAATTGCCTGTAATTGCAGTG
TCTTTTAAAAGCTGCAAAAAGAAAATGTCAGCCCAATTTATTGGTCGATC
GTAAGTCCAGGAAGGTGGGAACGAAAAAACGTAAATGTAAGTTCGACTAA
ATTATAAATGCAATAACTATTATTATCATTTCTATAGCCCTGAACTTTCG
TCTTTTCTGCTTTTGAAAGGAAGAATGAAGGTACTTATTAAATCAAGGTA
AACATATTGCAAATCTGTTAATCAAATTATTTATTATTTTATAGGAAGTA
CTCTTCTCAATATGGTTCCGGCTCGTCAAAGGAGCCAGAACAAGGAAGGA
TATCTGATCCTTTTGCTTCTAAGCCGGACATTGTTTCTCAGCGTCCTATC
AAGTGGAAGGAAAATCCCAGGTGGACGAGCACCAGGTCTTGCAAGTTCCT
TGTGATGCATCATCAGCTACACTAGGAACTAAAAGATGTAAGATTATTAT
TATTATGCTTATCATCGTAATTAATTAATTTATATGATTTATTATAGGCA
ATTGGTAATGATGCAAATCCCATCCTGATGGAAATGAGTCATCATATTCT
ACTTAACTTCAATATCGAAGGATGCAGGCAGGGAAGGTTGCAAGGATAGC
ACAGAAATAGACCTTTTGACATGGTCATCCTCCTGACTCAATCCCGTCGA
TCTTCACAACTAGCTAAGGCTGTGCAAAATATGACTCAGCAGGATCAGGA
GAATTTGCCGGTAACTCTAGTAAGAGACAGGGCATTGCTCTTTTACTTTT
AAGAGGGTCACGGTCAAAGGGGATGGATGTGCATGAATATCACGTCTTCT
GAGTATATGGAAAAGATTAAGTACTGTAATGGGTACCGGATCTTTTCATC
TAAGTCAAATAAGACCAAGGAATCTATGGGTACTGCTAATATCATAGTAA
ATGATAGCCTAGCAAAGACACTTCTCAAGTCTGATTTCTTCTTTCGTATT
CTGGGTGGAGTGGAATCGTAA
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