EMLSAT00000009004, EMLSAT00000009004-704851 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009004
Unique NameEMLSAT00000009004-704851
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s5650supercontigLSalAtl2s5650:4067..4550 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009004 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009004EMLSAG00000009004-691770Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039974EMLSAE00000039974-748902Lepeophtheirus salmonisexon
EMLSAE00000039975EMLSAE00000039975-748903Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768433auto768433Lepeophtheirus salmonispolypeptide
EMLSAP00000009004EMLSAP00000009004Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009004

>EMLSAP00000009004 ID=EMLSAP00000009004|Name=EMLSAP00000009004|organism=Lepeophtheirus salmonis|type=polypeptide|length=120bp
MKSFIALSALLAIAFADHPAPAPYHPAPAPYXPAPAYKPAPYHPAPSYKE
DPTVYQYRYAVSDEYXGLNFEADEARDGYSTQGKXSVALPDGRIQTVSYN
VADAYSGYVADVTYSGEPKY
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mRNA from alignment at LSalAtl2s5650:4067..4550+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009004-704851 ID=EMLSAT00000009004-704851|Name=EMLSAT00000009004|organism=Lepeophtheirus salmonis|type=mRNA|length=484bp|location=Sequence derived from alignment at LSalAtl2s5650:4067..4550+ (Lepeophtheirus salmonis)
CTCAAAGCATCCAGTATCAAAGTATTAGTTTTCTAACTCTAATTCAATCA
ACATGAAGGTAAGTAAYGAATAAGAATCAAATCCACAAATGTGAACCTTG
AATTCACCATTACTTTATTCTTCTATACAGTCCTTTATTGCTTTGTCTGC
TCTTTTGGCCATTGCCTTTGCTGACCACCCAGCACCCGCTCCCTACCACC
CAGCCCCTGCTCCTTATCMCCCTGCTCCAGCCTACAAACCCGCCCCTTAC
CACCCAGCTCCTTCCTACAAGGAAGATCCAACAGTCTACCAATACCGATA
TGCTGTCAGTGATGAATATGMTGGACTCAACTTTGAAGCTGATGAGGCCC
GTGATGGATACTCCACCCAAGGAAAGTMCTCTGTTGCCCTTCCCGACGGT
CGCATCCAAACTGTGTCCTACAACGTTGCTGATGCTTACTCTGGTTATGT
TGCTGACGTTACTTACTCTGGAGAGCCCAAATAC
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