EMLSAT00000009007, EMLSAT00000009007-704854 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009007
Unique NameEMLSAT00000009007-704854
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s565supercontigLSalAtl2s565:239651..242899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009007 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009007EMLSAG00000009007-691773Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039981EMLSAE00000039981-748909Lepeophtheirus salmonisexon
EMLSAE00000039982EMLSAE00000039982-748910Lepeophtheirus salmonisexon
EMLSAE00000039983EMLSAE00000039983-748911Lepeophtheirus salmonisexon
EMLSAE00000039984EMLSAE00000039984-748912Lepeophtheirus salmonisexon
EMLSAE00000039985EMLSAE00000039985-748913Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775110auto775110Lepeophtheirus salmonispolypeptide
EMLSAP00000009007EMLSAP00000009007Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009007

>EMLSAP00000009007 ID=EMLSAP00000009007|Name=EMLSAP00000009007|organism=Lepeophtheirus salmonis|type=polypeptide|length=322bp
MRRRMFIYYFLHTIWSITSAVANSSGTSSIGRNGPYWDSFRHRTSPEAAK
LCTVGTRQSPIDIPRSGNIQASFGALTFTNYDMVPSKYTLVNNGHTAKVS
PVNTNPIAPLVNGGGLGSTFQFAQFHFHWGDESDVGSEHLIGGRAYPLEM
HMVHFNTKYGSDLLGALGKGKGAFDTLAVFGVLFVVQESDNPVMDPIIKG
LSSIKNASTETDIRGFPLYQLLPANEQSYYRYMGSLTTPLCNQIVIWTVY
QVPVSISERQLEEFRSLQYGDESQPLVNTFRNSQPINGRIIMEVSSSPLA
QISLSLFCFSLFLPFILTSFRH
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mRNA from alignment at LSalAtl2s565:239651..242899+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009007-704854 ID=EMLSAT00000009007-704854|Name=EMLSAT00000009007|organism=Lepeophtheirus salmonis|type=mRNA|length=3249bp|location=Sequence derived from alignment at LSalAtl2s565:239651..242899+ (Lepeophtheirus salmonis)
GGATCTTCAACAACAATAAGAAACAAGAGAGAGGAAAAAGTGAGAGAAGA
GAAGAGACTGGGAGCTTTCCTATGGCTCCGAAAAAGATTTGGTGAAGTTG
AGAGTCAGATGACCAAGAACAATGTTAGTTCATTCTATGGGTATCTTTGG
AAGATTTGTGCATAGAAAGTACGTAGGAACGCATGTAGAAGCACACATCT
TTTAAGGAAGGAAAGACAGAGTAGTAGGAAGAAGCTGTAAGAAGGAGAAG
AAGAAGAAGGAGGAGGTGGTGAATAATAATAAAAAGAAGCAGAAGAATAA
GGCATATGATGTGCCTACGATATTATTACTATAATACGTTCTAATAGAAA
GACTATCGAATGAATTACATGCAATGAGAGGATGGGTTATCCGGCGTGTG
AAACTACGGTTAAGATTTTTTTCTTCTATTTCTTAATAAAATCCTACATA
ACAAAATGAATCTGTTAGATTCATTTATGAATCAAAGGGAGAATCCCGAG
AGATATTTTTTTTAAAGAACTACTGTCAATACCATTTGAGCAGAAAATAT
ACTACATACAAAAAAAAAAAAAAATAATTTGAATCATGCGCCGCCGAATG
TTCATTTATTACTTCCTTCATACCATTTGGAGTATTACTTCAGCAGTAGC
AAATTCTTCCGGGACGTCTTCCATCGGACGCAACGGCCCCTATTGGGATT
CATTCAGTAAGTGTTCTCAATCCTTATACATACGTTTATTAGTGTACGTT
CAAAATTTAATGGATTCGCGGTAACTGGAGTTGTGGGTTAATAGAGGGAT
GTTGCCGGAATTGCATCATCCCTTTTTTGAACTTCAAAGATGCATTGCGT
ACGTGTACAGTGATTATAAATGAGTGAAGATGTCATTCCTATTATTGAGT
CTTTTGTGTTCATTAGACCTCAATCATTATTATGTATATTAAAATACAGA
AAGTAAAAAATCCATTAATGAGATTGCCTCATTATACTCAAATATTACTT
TTTCTAAACATAGTCCTTGTCTTCATTATTATATTTATATTGTGTCTTTC
AAATTAGGGCATCGCACGAGTCCTGAAGCAGCTAAATTATGTACAGTTGG
CACACGGCAGTCTCCCATAGATATCCCACGAAGTGGGAACATACAGGTAC
TTCACACAAAGAAAAAAGTTCCGCAAACTTTTTTCTACTCTTCTAAATTT
CCACCTAGGCTTCCTTCGGGGCACTAACTTTCACAAACTATGACATGGTT
CCTTCGAAATACACATTGGTTAATAATGGCCACACAGCCAAAGTCTCTCC
AGTCAATACTAACCCCATAGCACCCCTTGTGAACGGGGGTGGCCTTGGAT
CCACTTTTCAATTTGCACAGTTTCACTTCCATTGGGGTGACGAGTCAGAT
GTTGGCTCTGAGCATTTGATTGGTGGTAGGGCCTATCCTCTGGAAATGCA
TATGGTTCATTTCAATACAAAGTATGGGTCAGATCTCTTGGGCGCTCTTG
GTAAAGGCAAAGGAGCCTTTGATACTCTTGCTGTTTTTGGAGTGTTATTT
GTGGTTCAGGAATCGGATAACCCAGTTATGGATCCCATCATTAAGGGCCT
TTCGTCCATCAAGAATGCTTCCACTGAAACAGATATTCGTGGATTTCCCT
TGTATCAGCTCTTGCCAGCAAATGAGCAATCATACTATCGCTACATGGGC
TCTCTTACAACTCCTCTCTGCAATCAAATTGTCATTTGGACAGTCTATCA
GGTATGGGTCTTTTTTTGAAGAAAAAAAAATTATATATATTCCTAATATT
ACAATATATATTTAATTATAGGTACCAGTTAGTATTTCTGAAAGACAATT
GGAGGAATTTAGAAGTCTACAATATGGAGATGAATCTCAACCTCTTGTCA
ATACCTTTAGAAATTCTCAACCTATCAATGGACGAATTATAATGGAAGTT
TCCTCTAGTCCTTTGGCTCAGATATCTTTGTCCCTTTTCTGTTTCTCTCT
CTTCTTACCCTTTATACTAACATCCTTTCGTCATTAATACCTTGTTGTCC
ATGATGGACAAATGAACACTGGACTGACGATCCCCCTTCCCTCCCTTTTC
TCTAATCAATTGCAAATAAATAAGTAGGAGAAGCATTTCTATAGAGATTC
AACAAATATAAAAAAGGGTGCCGAAGGATACGTGTTTTGAGGGGGGTCAC
CCCTCTATGTATCCGGAGAAAAAAAAGCTGTCACTTTTGTCAGAAATTAT
TTGGATAATATCCAATAACATTATCATAACTATTTTAAATGTTGAATTTA
TGTAGGAATGCTAAATTTTAAATGTACATATTGCAATACATGTTATACCG
ATATGAAGTTACAAAATGTAACACTCAACAAATCTAAATCTTTCAATTTT
CTACCAATCCAATCATCAGAGGTGTTTGATGTCTAGTTAGCCANTTAAGA
ATTTTAGTCCTTCTTGTGTATAATATATATACTAGGGTTCCTCATTTCCC
GACAAATAAAGCTTTACACATCGAGATCCCGACAATTAACAATAAATGAT
GTGCAGTTAAAATATTTCTTTTTATATTTTAAAAAGAAATTATATATTAT
TCTATTTTTTTACTATTTACCTCAGCCTTAATAGTGCAAGGATTTTTATT
TTTAGCTAGCAGGACACAATTTTTTTTAAATACGTAAACAGATAACTGTG
GAGCTGGAACCATTTTTCGAAAATATATTTTTTTTAAATTTAATACTCTT
TAAAAAAAATCAAAATTGTCAAAACATTTTTTCCTCAGGACTTCCATAAA
AATCCTGAAGGGACCTTTGATGACTTCATCATTTTATAATTGTCAGCATC
AGCGTTGTTTACTTACATTAGTTTGTAAGTAAAGCGACAGAGAGTCGCGT
TACCTTGCGGTAAAATAATACAACTCTCTGAATGATAATATTATTTGTAT
TTGAGGGGGAAGAAAAATAAATTAAATAGGAAACCACTTTTTTATTTATT
CATGAAGCACTCCGAAACTATATACTGTCACACCACTTTGCAGAGAATCT
TTGTTTGTTTGCTAATGCCCCATTAAATGCGAGATCTCCTTGTAAATCCC
CGGGATATTCCGGGAAAATGTTATCTAGACAGAGAAACCCTAGTACATAC
CCAGGTATATTATATTACCCTTCTTTTACGATACAGAGATTATTTAATGT
CTAGTCAATTATGTCTATTTTTATGAGAGTTAATTTTTTCACAATTTTT
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